Supplementary Table 2 Genes whose expression significantly differ between MCBs and DCBs

Genes up-regulated in MCBs / Genes down-regulated in MCBs
Cell adhesion/ motility / C20orf42 / Chromosome 20 open reading frame 42 / CDH1 / Cadherin 1, type 1, E-cadherin
CDH19 / Cadherin 19, type 2 / CLDN7 / Claudin 7
COL9A1 / Collagen, type IX, alpha 1 / TACSTD1 / Tumor-associated calcium signal transducer 1
HAPLN1 / Hyaluronan and proteoglycan link protein 1 / F11R / Junctional adhesion molecule 1, JAM1
ICAM1 / Intercellular adhesion molecule 1 (CD54) / AZGP1 / Alpha-2-glycoprotein 1, zinc
EFNB1 / Ephrin-B1 / DNALI1 / Dynein, axonemal, light intermediate polypeptide 1
CSPG4 / Chondroitin sulfate proteoglycan 4 / SPINT2 / Serine protease inhibitor, Kunitz type, 2
TNFRSF12A / Tumor necrosis factor receptor superfamily, member 12A
IL8 / Interleukin 8
MSN / Moesin
VIM / Vimentin
FLNA / Filamin A, alpha
ENPP2 / Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)
Development / EFNB1 / Ephrin-B1 / FRZB / Frizzled-related protein
ANGPTL4 / Angiopoietin-like 4 / FRP4 / Secreted frizzled-related protein 4
S100B / S100 calcium binding protein, beta / TRPS1 / Trichorhinophalangeal syndrome I
ANKH / Ankylosis, progressive homolog / MB / Myoglobin
TNFRSF12A / Tumor necrosis factor receptor superfamily, member 12A / DACH1 / Dachshund homolog 1 (Drosophila)
BMP2 / Bone morphogenetic protein 2
DAZL / Deleted in azoospermia-like
EYA1 / Eyes absent homolog 1 (Drosophila)
GPM6B / Glycoprotein M6B
SRD5A1 / Steroid-5-alpha-reductase, alpha polypeptide 1
TNFRSF11B / tumor necrosis factor receptor superfamily, member 11b
(osteoprotegerin)
FABP5 / Fatty acid binding protein 5
FOXC1 / Forkhead box C1
Metabolism / FABP5 / Fatty acid binding protein 5 / AZGP1 / Alpha-2-glycoprotein 1, zinc
PLAGL1 / Pleiomorphic adenoma gene-like 1 / NME5 / Non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
BCAT1 / Branched chain aminotransferase 1, cytosolic / ABAT / 4-aminobutyrate aminotransferase
CTSZ / Cathepsin Z / ARSD / Arylsulfatase D
CYP26B1 / Cytochrome P450, family 26, subfamily B, polypeptide 1 / CA12 / cDNA FLJ20151 fis, clone COL08412.
FLJ11196 / Acheron (FLJ11196) / GSTM3 / Glutathione S-transferase M3 (brain)
OCA2 / Oculocutaneous albinism II / NAT1 / N-acetyltransferase 1
PLA2G4A / Phospholipase A2, group IVA / PTE2B / Peroxisomal acyl-CoA thioesterase 2B
PLOD / Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 / STK16 / Serine/threonine kinase 16
PRNP / Prion protein (p27-30) / THRSP / Thyroid hormone responsive
S100A3 / S100 calcium binding protein A3 / ACOX2 / Acyl-Coenzyme A oxidase 2, branched chain
SOD2 / Superoxide dismutase 2, mitochondrial
SRrp35 / Serine-arginine repressor protein (35 kDa)
SULT1B1 / Sulfotransferase family, cytosolic, 1B, member 1
UPP1 / Uridine phosphorylase 1
ENPP2 / Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)
Signal transduction / TNFRSF11B / Tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) / CEACAM6 / Carcinoembryonic antigen-related cell adhesion molecule 6
IL6 / Interleukin 6 / RET / Ret proto-oncogene
IL8 / Interleukin 8 / GPR81 / G protein-coupled receptor 81
FLNA / Filamin A, alpha (actin binding protein 280) / P2RY2 / Purinergic receptor P2Y, G-protein coupled, 2
ENPP2 / Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) / ERBB2 / v-erb-b2 erythroblastic leukemia viral oncogene homolog 2
ADM / Adrenomedullin / VAV3 / vav 3 oncogene
ADORA2B / Adenosine A2b receptor / AR / Androgen receptor
GAL / Galanin / ESR1 / Estrogen receptor 1
GNAI1 / Guanine nucleotide binding protein (G protein), alpha inhibiting Activity polypeptide 1 / PTGER3 / Prostaglandin E receptor 3 (subtype EP3)
HRH1 / Histamine receptor H1
GABRA5 / Gamma-aminobutyric acid (GABA) A receptor, alpha 5
Transcription / ARNTL2 / Cycle-like factor CLIF mRNA, complete cds. / TRPS1 / Trichorhinophalangeal syndrome I
CSDA / Cold shock domain protein A / CREB3L4 / cAMP responsive element binding protein 3-like 4
FOXD1 / Forkhead box D1 / ELF4 / E74-like factor 4
FOXL2 / Forkhead box L2 / ELL3 / Elongation factor RNA polymerase II-like 3
MYC / v-myc myelocytomatosis viral oncogene homolog (avian) / FOXA1 / Forkhead box A1
PCOLCE2 / Procollagen C-endopeptidase enhancer 2 / FSIP1 / Hypothetical protein FLJ35989
FOXC1 / Forkhead box C1 / MYB / v-myb myeloblastosis viral oncogene homolog (avian)
CEBPB / CCAAT/enhancer binding protein (C/EBP), beta / SPDEF / SAM pointed domain containing ets transcription factor
ZFP62 / Zinc finger protein 62 homolog (mouse)
ZNF339 / Zinc finger protein 339
ZNF435 / Zinc finger protein 435
DACH1 / Dachshund homolog 1 (Drosophila)
GATA3 / GATA binding protein 3
XBP1 / X-box binding protein 1
AR / Androgen receptor
ESR1 / Estrogen receptor 1
PTGER3 / Prostaglandin E receptor 3