Conservation Genetics Resources

Supplementary Material 2

Development and characterisation of 20 novel microsatellite markers for the little blue penguin (Eudyptula minor) using next-generation sequencing

Stefanie Grosser1 and Jonathan M. Waters1

1 Allan Wilson Centre, Department of Zoology, University of Otago, PO Box 56, Dunedin 9054, New Zealand

Corresponding author:

Stefanie Grosser, E-mail:

Table S2. Characteristics and GenBank accession numbers for 20 microsatellite loci for E. minor

Locus / Repeat motif / Primer Sequence 5'-3' / Product sizea / Accession No.
Em1 / (ATCT)8 / F: / TCCAGCTGAGTTGTATGACTTC / 210 - 258 / KM272221
R: / CCCTGTGAGTATAGAGCCTGG
Em2 / (AGAT)15 / F: / GGCACTGGGATCTTTCTTCC / 197-265 / KM272222
R: / GACCATGCTGCAGGTTCTTG
Em4 / (ATCT)12 / F: / TGGGAGTGTGAAGTGGATGC / 276-312 / KM272223
R: / TCCTTCAGCCTATCCACATTTC
Em5 / (AAAT)10 / F: / CGGAGACCTTGCATCTTACC / 106-138 / KM272224
R: / CAGTCCTGTACCTCCCTCAC
Em6.2 / (ATCT)11 / F: / TCTCATTACCCGCTGAAGTG / 254-294 / KM272225
R: / TTGGTGGAAATCAATGGACA
Em8 / (AGAT)9 / F: / GGTGCTGGGAGATGGCTTC / 178-208 / KM272226
R: / ACGAAATGGTTTGGCTGGTG
Em9 / (GATA)14 / F: / TTCACCACAACTCTCTGGGC / 280-372 / KM272227
R: / CTACCCACCCACCCACTG
Em12.2 / (TTA)15 / F: / TTGGAAGCTTATGCTTTGGTT / 184-226 / KM272228
R: / AAACAACGTCACCTCAGCAA
Em13 / (ATT)13(GTT)13(ATC)7 / F: / AGCACAGTCTGTTGGGAAAC / 245-329 / KM272229
R: / TCGGTGAAGTGTCCAGGAAC
Em14 / (CAA)9 / F: / CAGGAGTGAACCCAAAGCTG / 225-252 / KM272230
R: / AGGTACCGAGGGAAGCAAAG
Em15 / (CAT)20 / F: / ATGAAGCATGTGACTGCTGC / 270-318 / KM272231
R: / CCTGTCTTTGTCCAACGGTG
Em21 / (CT)10 / F: / CCACATTCATCCACAGGCAG / 172-176 / KM272232
R: / CCTCGCAGGGAATATTTGGC
Em22 / (GT)14 / F: / TCAGCAGCTTTGTTGTACGC / 307-331 / KM272233
R: / TTGCTGTGCTGTGACTGTTC
Em23 / (CA)11 / F: / GATGCATGTGGAGGAAGTGC / 164-180 / KM272234
R: / GGCAACATGGTAGCTGACAC
Em24 / (AC)11 / F: / GAGTCCTTGCATCCCTACCC / 207-231 / KM272235
R: / CAGGCGTCAAGGTAAGCATG
Em26 / (GT)10 / F: / GTCATTACTCAACACCCACGG / 256-272 / KM272236
R: / AGCACGGTGACAATAGAGGG
Em27 / (AG)8 / F: / AATCTCCCAGGTTCCAGTCC / 266-274 / KM272237
R: / GCAGAAGGAATTCAGCCCAG
Em28 / (GT)12 / F: / GCACTACCTCTTAGAGATGCTC / 147-159 / KM272238
R: / CAGGAGGAAGTAGCGGGTTC
Em29.2 / (AC)10 / F: / GTCCACTGACATGGGAAGGT / 192-198 / KM272239
R: / CTGGTGCATTTACAGCACATC
Em30 / (AC)13 / F: / TGGCTTGAATTAGTCCTGTCAG / 213-235 / KM272240
R: / TGTGCTGTCCTGAGGTTTCC

a product size includes 18 bp M13-tail