U:\merops\manuscript\table4.doc20/09/2018
MEROPS family / Pfam family / Sequences that have subsequently been added to the MEROPS family, or that are very similar to sequences already in MEROPS / Others (not added)A01 / PF00026 (Eukaryotic aspartyl protease) / O42630 O62509 O76856 O76921 Q38934 Q9VQ11 Q9VQ12 Q9VQ13 Q9VQ14 Q9W5G3 Q06325 Q42369 Q9BGG5 Q9FSH9 Q9H2V8 Q9JIE2 Q9P0D2 Q9PRT5 Q9QW84 Q9R258 Q9S9K4 Q9SD13 Q9SD14 Q9TTE0 Q9UQK5 Q9URA5
A09 / PF03539 (Spumavirus aspartic protease (A9)) / O12817
C01 / PF00112 (Papain family cysteine protease) / O23681 O45734 O61515 O97160 P19092 P25793 P25802 P90627 Q03106 Q03107 Q03108 Q03109 Q06544 Q11003 Q11006 Q16931 Q24943 Q25026 Q25027 Q25028 Q25029 Q25030 Q25031 Q25032 Q26425 Q40413 Q63088 Q94573 Q9GNM4 Q9GNM5 Q9GP23 Q9LP42 Q9N9C5 Q9N9C7 Q9SC35 Q9SC36 Q9SC37 Q9SQ82 Q9U938 Q9ZSI0 Q25025 Q25991 Q26152 Q26153 Q26154 Q26155 Q26156 Q26157 Q9AUC7 Q9BL59 Q9BMB5 Q9DFQ0 Q9FF69 Q9FSS0 Q9GNM6 Q9GNM7 Q9GPN2 Q9GPN3 Q9GRF1 Q9MZF5 Q9N6N3 Q9N9C6 Q9PGZ0 Q9QUW3 Q9S7J0 Q9S894 Q9S8M1 Q9S965 Q9S9A9 Q9SIE8 Q9TWF7 Q9TWN9 Q9TWP8 Q9UJW1 Q9LR55 O58048 Q9UY51
C02 / PF00648 (Calpain family cysteine protease) / O75808 Q9N8Q9 Q9Y6Z8 Q9HBB1
C05 / PF00770 (Adenovirus endoprotease) / Q64820
C09 / PF01707 (Peptidase family C9) / Q88429 Q66592 Q87644 Q9WIJ1
C12 / PF01088 (Ubiquitin carboxyl-terminal hydrolase, family 1) / O04482 Q9Y5K5 Q9TWA0
C13 / PF01650 (Peptidase C13 family) / O24326 O89017 Q9BTY1
C14 / PF00656 (ICE-like protease (caspase) p20 domain) / O55194 Q99M47 Q9BUP7 Q9CXM4 Q9D089 Q9V626
C15 / PF01470 (Pyroglutamyl peptidase) / Q01328 Q99QV1
C25 / PF01364 (Peptidase family C25) / Q9R513 Q9R516 Q9ZNB5
C46 / PF01079 (Hint module) / Q9YGV7
C55 / PF03421 (Peptidase C55 family) / Q9F0I6
C57 / PF03290 (Vaccinia virus I7 processing peptidase) / P12926
M01 / PF01433 (Peptidase family M1) / O57579 O61534 O76122 O76803 Q9CAE1 Q9CAJ3 Q9PW08 O43487 O43604 O45540 O60668 O97784 Q9F3F2 Q9NAA0 Q9TYN3 Q9TWP6 P46557 / Q20521
M02 / PF01401 (Angiotensin-converting enzyme) / Q15540 Q16425 Q61265 Q9EQM9
M03 / PF01432 (Peptidase family M3) / Q9BW75 Q9CUL3 Q9KQL5 / Q9ZG19
M04 / PF01447 (Thermolysin metallopeptidase, catalytic domain) / Q9LCJ5 Q9R9S7 Q45779 Q9L1F9
M04 / PF02868 (Thermolysin metallopeptidase, alpha-helical domain) / Q9LCJ5 Q9R9S7 Q45779 Q48578 Q9L1F9
M13 / PF01431 (Peptidase family M13) / O16607 Q18673 Q9VME6 O17115 O45311 Q09319 Q28868 / O44472 O45151 O45157 P91466 P91467 P91515 P91519 Q09393 Q09539 Q9N566 Q9VN01
M16 / PF00675 (Insulinase (Peptidase family M16)) / O16249 O94745 Q46205 O15241 O35836 O60044 P78761 Q22370 Q983M8 Q9ANJ3 Q9BI61 Q9I6C3 Q9T2S3 Q9T2S8 Q9T2S9 Q9TVZ6 Q9ZLH7 Q9N9K2
M17 / PF00883 (Cytosol aminopeptidase family, catalytic domain) / O24022 Q9CWN8
M18 / PF02127 (Aminopeptidase I zinc metalloprotease (M18)) / Q9HAC6
M19 / PF01244 (Renal dipeptidase) / Q99LA8
M20 / PF01546 (Peptidase family M20/M25/M40) / O04373 O34916 O34944 O34984 O65840 O81642 O81702 Q9MB49 O49434 O49682 O59402 P43616 P54551 P76052 P77425 Q18621 Q48969 Q57051 Q97VB6 Q984M3 Q985I5 Q986X8 Q98AF9 Q98GJ6 Q98K54 Q98LM4 Q99SN6 Q9A0F4 Q9A561 Q9BL46 Q9CEM7 Q9D1A2 Q9EUV7 Q9EZ94 Q9F464 Q9F8I4 Q9F8K6 Q9FB05 Q9FBL9 Q9FCK3 Q9FIY0 Q9H7K8 Q9I673 Q9JTL0 Q9K657 Q9KET8 Q9KWB8 Q9KZ76 Q9NUV1 Q9NW02 Q9PH30 Q9RC39 Q9RSU7 Q9RSV5 Q9RWQ4 Q9YAM6
M22 / PF00814 (Glycoprotease family) / O94637 O51203 O83846 O86791 P72633 Q55302 Q97T29 Q98BK6 Q98R91 Q99Y44 Q9CIR4 Q9JW17 Q9PQH9 Q9RWB3 Q9U0J7 Q9WZX7 Q9ZCZ9 / P71878
M24 / PF00557 (metallopeptidase family M24) / O30666 O31267 O33008 O34484 O66182 Q9FV51 Q9LS05 O17045 O17046 O44750 O53047 O59565 O60180 O82491 P38488 Q13548 Q44404 Q981H3 Q982L4 Q982N0 Q987A1 Q989W8 Q98A00 Q98AF2 Q98AK0 Q98DX8 Q98E18 Q98GC2 Q98HW5 Q98KC8 Q98L22 Q9A839 Q9ADZ2 Q9ADZ5 Q9BT75 Q9CWK4 Q9GRK6 Q9KI40 Q9KVS2 Q9M1X7 Q9N5R9 Q9RHU9 Q9U2V9 Q9UH34 Q9UM59 Q9W071 Q9Y5B9
M32 / PF02074 (Carboxypeptidase Taq (M32) metallopeptidase) / Q9R5E6
M48 / PF01435 (Peptidase family M48) / Q97DN5 O29337 O67101 P36163 P71453 P74114 P94362 Q97TZ3 Q98FA6 Q98NB9 Q9D8H7 Q9FLI5 Q9HS47 Q9P7G4 Q9PHD8
M55 / PF04951 (D-aminopeptidase) / P26902
M60 / PF03272 (Viral enhancin protein) / P29998 P41723 P54232
S01 / PF00089 (Trypsin) / O18434 O18436 O18445 O54740 O60235 O76900 O88301 O88947 O97506 P00760 P00761 P04187 P06871 P06872 P08426 P10144 P15944 P28175 P57727 Q26422 Q27081 Q27083 Q29463 Q29464 Q63224 Q90629 Q99L32 Q9CPN9 Q9D7Y7 Q9KWH0 Q9LBK0 Q9N2D1 Q9NRS4 Q9PUF3 Q9TV35 Q9UB93 Q9VPN7 Q9VPN8 Q9XSM1 Q9XSM2 Q9YGJ8 O74325 O76654 P19007 P78341 P78342 Q26423 Q62526 Q62540 Q62541 Q63927 Q9DFD4 Q9GTK6 Q9PRR3 Q9PRR4 Q9PRW5 Q9PS60 Q9PT40 Q9QV96 Q9QV97 Q9QVG5 Q9QVG6 Q9SRP2 Q9TR44 Q9TRJ1 Q9TRJ3 Q9TRU3 Q9TRV7 Q9TWL3 Q9TXD8 Q9UD25 Q9UD52 Q9UD53 Q9UD54 Q9VJD6 O76652
S06 / PF02395 (Immunoglobulin A1 protease) / O88093 Q47692 Q9AL58 P44969 P45384 P45385 P45386
S08 / PF00082 (Subtilase family) / O65834 O65835 O82440 O82777 O89023 P15292 P15293 P15926 P16271 P29141 P42790 Q02470 Q10575 Q18772 Q48545 Q53637 Q60106 Q94704 Q97LD7 Q9A180 Q9EQV6 Q9F8Q4 Q9HJJ1 Q9K2K8 Q9K6G6 Q9KEM1 Q9KWR4 Q9L908 Q9LJ20 Q9RW57 Q9S4K2 Q9TTJ8 Q9XZH2 Q9ZNI6 Q9ZS42 Q9ZS43 Q9ZS44 Q9ZSP5 O18322 P26016 P58099 P96144 Q45301 Q46767 Q48674 Q51846 Q98HT0 Q9AIQ2 Q9AJS6 Q9CZY4 Q9F941 Q9F942 Q9F943 Q9FDF2 Q9FDF3 Q9FDF4 Q9GTN7 Q9I496 Q9JW98 Q9UUP2 Q9ZSB2
S10 / PF00450 (Serine carboxypeptidase) / O13849 O60123 O75225 Q9C7D3 Q9C7D4 Q9C7D6 Q9C7E2 Q9H3G5 Q9HB41 Q9LHI3 Q9LHI4 Q9LHI6 Q9LVX9 Q9NZ90 O57485 Q9BR08 Q9D2D1 Q9PDU7 Q9URG3
S11 / PF00768 (D-alanyl-D-alanine carboxypeptidase) / Q54906 Q57540 Q99VX5 Q9A1G0 Q49921 Q9R4B3
S13 / PF02113 (D-Ala-D-Ala carboxypeptidase 3 (S13) family) / P74173 Q9JVV4 Q9Z541 O05758
S14 / PF00574 (Clp protease) / O48891 O82421 Q982R9 Q9FHJ7 Q9LIZ7 Q9ST19 Q9SXJ5 Q9XJ35 Q9XJA0 Q9ZS78
S21 / PF00716 (Assemblin (Peptidase family S21)) / O40922 Q69585 Q85027 O09798 O39277 O39491 / Q66541 Q66620
S43 / PF03573 (outer membrane porin, OprD family) / Q9AQN9 Q9L7X9 Q9XC30
S48 / PF03574 (Peptidase family S48) / Q51320 Q9RAH5
S51 / PF03575 (Peptidase family S51) / P56946 Q9F2I8
T01 / PF00227 (Proteasome A-type and B-type) / O23709 O23710 O27270 O30518 O35521 O35523 O35524 O50110 O57983 O87598 P28061 Q53079 Q53083 Q58634 Q97AZ7 Q980L4 Q98RR2 Q98S25 Q98S57 Q9C7X3 Q9HR36 Q9IB83 Q9IB84 Q9LST5 Q9LST8 Q9LST9 Q9N9W5 Q9NC70 Q9NC78 Q9P992 Q9P996 Q9RAW7 Q9T0L7 Q9UXF3 Q9V0N9 Q9V247 Q9V2V4 Q9YER0 Q9YES4 O24079 O64532 O77080 O77288 O77396 P90868 Q98RS2 Q98RV9 Q98RW3 Q98UE7 Q9BMX8 Q9BN23 Q9BZ93 Q9CWR4 Q9I876 Q9IBB0 Q9IBB1 Q9IBB2 Q9IBB3 Q9IBB6 Q9IBB8 Q9IBC1 Q9LIP2 Q9NC68 Q9NC69 Q9NC80 Q9NC81 Q9NC82 Q9NDA3 Q9NI39 Q9NI40 Q9NI41 Q9NI42 Q9NI43 Q9UM79 Q98S33 / Q9I304
T03 / PF01019 (Gamma-glutamyltranspeptidase) / O76033 P71828 Q50143 Q987N3 Q9BX51 Q9BYP5 Q9BYP6 Q9D347 Q9F5N9 Q9JUL8 Q9LGJ1 Q9N2V0 Q9N5V4 Q9R5M9 Q9UEN8 Q9UEN9 Q9ZBG9
U32 / PF01136 (Peptidase family U32) / Q9ZNF7
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