Table S2. Human genes that contain 7 or more CAG or CUG repeats

CAG-containing genes
achaete-scute complex homolog 1 (Drosophila)
AF4/FMR2 family, member 3
androgen receptor
arginine-fifty homeobox pseudogene 2
AT rich interactive domain 1A (SWI-like)
AT rich interactive domain 1B (SWI1-like)
AT rich interactive domain 3B (BRIGHT-like)
ataxin 1
ataxin 2
ataxin 3
ataxin 7
atrophin 1
basic helix-loop-helix family, member e22
B-cell CLL/lymphoma 6, member B (zinc finger protein)
BMP2 inducible kinase
BTB and CNC homology 1, basic leucine zipper transcription factor 2
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
calpain 6
chromosome 14 open reading frame 4
chromosome 14 open reading frame 43
connector enhancer of kinase suppressor of Ras 2
dachshund homolog 1 (Drosophila)
DCP1 decapping enzyme homolog B (S. cerevisiae)
delta/notch-like EGF repeat containing
DENN/MADD domain containing 4B
distal-less homeobox 6
E1A binding protein p400
E2F transcription factor 4, p107/p130-binding
eukaryotic translation initiation factor 2C, 1
family with sequence similarity 104, member A
family with sequence similarity 155, member A
family with sequence similarity 157, member A
family with sequence similarity 157, member B
family with sequence similarity 157, member C
FERM and PDZ domain containing 3
forkhead box J2
forkhead box P2
formin 2
glucuronidase, beta/ immunoglobulin lambda-like polypeptide 1 pseudogene
glutaminase
histone deacetylase 2
huntingtin
hypothetical protein LOC730130
insulin receptor substrate 1
interleukin 9 receptor
keratin 76
KIAA1462
KIAA2018
mab-21-like 1 (C. elegans)
mastermind-like 2 (Drosophila)
mastermind-like 3 (Drosophila)
mastermind-like domain containing 1
mediator complex subunit 12
mediator complex subunit 15
membrane associated guanylate kinase, WW and PDZ domain containing 1; CNKSR family member 3
meningioma (disrupted in balanced translocation) 1
microtubule-associated protein 2
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
myeloid/lymphoid or mixed-lineage leukemia 2
myocyte enhancer factor 2A
myosin phosphatase Rho interacting protein; similar to Myosin phosphatase Rho-interacting protein (Rho-interacting protein 3) (M-RIP) (RIP3) (p116Rip)
natriuretic peptide precursor B
neuregulin 2
nicotinamide nucleotide adenylyltransferase 2
NPC-A-5
nuclear receptor coactivator 3
nuclear receptor coactivator 6
nuclear receptor co-repressor 2
numb homolog (Drosophila)-like
PAX interacting (with transcription-activation domain) protein 1
pim-1 oncogene
polymerase (DNA directed), gamma
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
POU class 6 homeobox 2
PR domain containing 10
prodynorphin
protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform
retinoic acid induced 1
S100 calcium binding protein A16
sal-like 1 (Drosophila)
SATB homeobox 1
signal recognition particle 14kDa (homologous Alu RNA binding protein) pseudogene 1; signal recognition particle 14kDa (homologous Alu RNA binding protein)
similar to family with sequence similarity 157, member B
similar to hCG1654959
similar to RNA binding motif protein 39; RNA binding motif protein 39
small nuclear RNA activating complex, polypeptide 4, 190kDa
solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
splicing factor, arginine/serine-rich 15
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
suppressor of cytokine signaling 7
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
TATA box binding protein
tensin 1
THAP domain containing 11
trinucleotide repeat containing 18
trinucleotide repeat containing 4
trinucleotide repeat containing 6B
ubiquitin specific peptidase 7 (herpes virus-associated)
vascular endothelial zinc finger 1
zinc finger homeobox 3; hypothetical LOC100132068
zinc finger protein 36, C3H type-like 2
zinc finger protein 384
zinc finger protein 790
CUG-containing genes
2,3-bisphosphoglycerate mutase
3'-phosphoadenosine 5'-phosphosulfate synthase 2
ADAM metallopeptidase with thrombospondin type 1 motif, 2
ADAM metallopeptidase with thrombospondin type 1 motif, 8
alkaline phosphatase, placental (Regan isozyme)
angiomotin
apelin
ATXN8 opposite strand (non-protein coding)
basic leucine zipper and W2 domains 2
beta-1,4-N-acetyl-galactosaminyl transferase 4
BRI3 binding protein
calcium/calmodulin-dependent serine protein kinase (MAGUK family)
canopy 3 homolog (zebrafish)
carboxypeptidase A6
cathepsin A
CD93 molecule
cholinergic receptor, nicotinic, alpha 3
chromosome 18 open reading frame 1
chromosome 4 open reading frame 48
cytochrome b5 type B (outer mitochondrial membrane)
dachsous 1 (Drosophila)
dystrophia myotonica-protein kinase
eukaryotic translation initiation factor 2-alpha kinase 3
family with sequence similarity 155, member B
family with sequence similarity 48, member B1
G protein-coupled receptor 37 like 1
GH3 domain containing
histidine rich carboxyl terminus 1
hypocretin (orexin) neuropeptide precursor
hypothetical LOC283314
Janus kinase and microtubule interacting protein 2
latent transforming growth factor beta binding protein 3
low density lipoprotein receptor-related protein 5
low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
membrane metallo-endopeptidase-like 1
mitogen-activated protein kinase kinase kinase 4
Notch homolog 4 (Drosophila)
parathyroid hormone 2
PAS domain containing 1
phospholipase A2 receptor 1, 180kDa
phospholipase B domain containing 1
programmed cell death 1
proprotein convertase subtilisin/kexin type 9
ribosomal protein L14
salt-inducible kinase 1
sialic acid binding Ig-like lectin 8
signal peptide, CUB domain, EGF-like 2
smoothened homolog (Drosophila)
sortilin-related VPS10 domain containing receptor 2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
stereocilin; stereocilin pseudogene
sushi-repeat-containing protein, X-linked
transmembrane and coiled-coil domain family 1
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
zinc finger protein 395