Table S2 Features of Pantoea genomes used in this study

Species / Subspecies / Strain / Genbank
accessionno. / Genome status / Genome size (Mb) / No.
ofCDSs / No.
ofcontigs / Contig
N50 (Kb) / Source or Reference
agglomerans / Tx10 / GCA_000475055.1 / Draft / 4.9 / 4500 / 25 / 587.0 / (Smith et al. 2013a)
agglomerans / Eh318 / GCA_000687245.1 / Draft / 5.0 / 4627 / 37 / 376.9 / (Walterson et al. 2014)
agglomerans / 299R / GCF_000330765.1 / Draft / 4.6 / 4157 / 109 / 109.4 / (Remus-Emsermann et al. 2013)
agglomerans / RIT273 / GCA_000627115.1 / Draft / 5.4 / 4914 / 26 / 573.7 / Monash University Malaysia
agglomerans / DAPP-PG734 / GCA_000710215.1 / Draft / 5.4 / 5016 / 195 / 53.9 / (Moretti et al. 2014)
agglomerans / R190 / GCA_000731125.1 / Draft / 5.0 / 4778 / 5 / 3393.5 / (Lim et al. 2014)
ananatis / AJ13355 / GCA_000270125.1 / Complete / 4.9 / 4067 / (Hara et al. 2012)
ananatis / LMG20103 / GCA_000025405.2 / Complete / 4.7 / 4241 / (De Maayer et al. 2010)
ananatis / PA13 / GCA_000233595.1 / Complete / 4.9 / 4372 / (Choi et al. 2012)
ananatis / LMG 5342 / GCA_000283875.1 / Complete / 4.9 / 4664 / (De Maayer et al. 2012)
ananatis / BRT175 / GCA_000475035.1 / Draft / 4.9 / 4563 / 43 / 256.0 / (Smith et al. 2013b)
ananatis / PaMB1 / GCA_000766045.1 / Draft / 4.8 / 4197 / 180 / 117.5 / Huazhong Agricultural University (China)
ananatis / LMG2665 / GCA_000710035.1 / Draft / 5.0 / 4787 / 17 / 1193.2 / (Adam et al. 2014)
ananatis / BD442 / GCA_000709995.1 / Draft / 4.8 / 4647 / 11 / 629.1 / (Weller-Stuart et al. 2014)
ananatis / PA4 / GCA_000710015.1 / Draft / 5.2 / 5094 / 17 / 726.2 / (Weller-Stuart et al. 2014)
dispersa / EGD-AAK13 / GCA_000465555.1 / Draft / 4.8 / 4420 / 40 / 237.7 / National Environmental Engineering Research Institute, India
stewartii / stewartii / DC283 / GCA_000248395.2 / Draft / 5.2 / 4937 / 65 / 201.7 / Ohio State University (USA)
stewartii / indologenes / LMG 2632 / GCA_000757405.1 / Draft / 4.7 / 3936 / 35 / 304.9 / University of Pretoria (South Africa)
stewartii / M009 / GCA_000786255.1 / Draft / 4.8 / 4307 / 56 / 223.2 / (Tan et al. 2015)
stewartii / M073a / GCA_000803205.1 / Draft / 4.8 / 4298 / 39 / 375.2 / (Izzati Mohamad et al. 2015)
vagans / MP7 / GCA_000757435.1 / Draft / 4.6 / 4005 / 8 / 877.2 / University of Pretoria (South Africa)
vagans / C9-1 / GCA_000148935.1 / Complete / 4.9 / 4590 / (Smits et al. 2010)
other / At-9b / GCA_000175935.2 / Complete / 6.3 / 5770 / DOE Joint Genome Institute (JGI) (USA)

References

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