Table 2 Sequence characterization of the selected Cot-1 DNA clones

Clone type / Clone No. / Size,bp / Naturea / NCBI Accession no./Identity / Clone type / Clone No. / Size,bp / Naturea / NCBI Accession no./Identity
type 1 / 3 / 74 / Mt / AC130807.30/85% / type 2 / 67 / 141 / C300 / U83398.1/78%
type 1 / 10 / 199 / Mt / AC130807.30/84% / type 2 / 78 / 115 / C300 / U83398.1/71%
type 1 / 16 / 117 / Mt / AC130807.30/83% / type 2 / 80 / 115 / C300 / U83398.1/70%
type 1 / 19 / 125 / Mt / AC130807.30/84% / type 2 / 90 / 107 / C300 / U83398.1/80%
type 1 / 76 / 174 / Mt / AC130807.30/87.5% / type 2 / 94 / 63 / Mt / CT573078.1 /92%
type 1 / 81 / 102 / Mt / AC130807.30/88% / type 2 / 65 / 204 / Mt / AC143337.27/87%
type 1 / 89 / 46 / Mt / AC166314.2/96% / type 2 / 74 / 327 / C / AC093544.8/97%
type 1 / 91 / 91 / Mt / AC130807.30/85% / type 3 / 17 / 143 / E180 / L07381.1/91%
type 1 / 95 / 49 / Mt / AC130807.30/91% / type 3 / 26 / 183 / E180 / L07381.1/90%
type 1 / 70 / 150 / Mt / AC151462.30/86% / type 3 / 34 / 470 / E180 / L07381.1/90%
type 1 / 79 / 380 / Mt / AC151462.30/85% / type 3 / 36 / 172 / E180 / L07381.1/94%
type 1 / 29 / 183 / Mt / AC157371.4/92% / type 3 / 37 / 142 / E180 / L07381.1/95%
type 1 / 123 / 245 / Mt / AC157371.4/93% / type 3 / 54 / 135 / E180 / L07381.1/95%
type 1 / 11 / 127 / RPG / AF439380.1/96% / type 3 / 59 / 157 / E180 / L07381.1/95%
type 1 / 38 / 128 / Mt / AC162787.39 /84% / type 3 / 102 / 259 / E180 / L07381.1/91%
type 2 / 18 / 115 / T / / / type 3 / 139 / 253 / E180 / L07381.1/94%
type 2 / 14 / 223 / C300 / U83398.1/77% / type 3 / 161 / 179 / E180 / L07381.1/92%
type 2 / 39 / 259 / C300 / U83398.1/74% / type 3 / 68 / 163 / Mt / AC157374.4/75%
type 2 / 53 / 141 / C300 / U83398.1/80% / type 3 / 87 / 227 / Mt / FP016157.1/82%
a Mt = M. truncatula genomic clone sequence; RPG = M. sativa retrotransposon polyprotein gene sequence; T = telomere-like sequence; C300 = higly repeated sequence in M. sativa subsp. caerulea (Calderini et al. 1997); C = Chloroplast DNA of M. truncatula; E180 = an AT-rich satellite DNA sequence in M. sativa (Xia and Erickson 1993).

Supplementary Fig. 1