Supplementary Table S1. Begomoviruses Used for Pairwise Sequence Comparisons and Recombination

Supplementary Table S1. Begomoviruses used for pairwise sequence comparisons and recombination analyses.

Virus species / Acronym / GenBanK access #
Brazil
Abutilon Brazil virus / AbBV / NC_014138
Abutilon mosaic Brazil virus / AbMBV / NC_ 016574
Bean golden mosaic virus / BGMV / NC_004042
Blainvillea yellow spot virus / BlYSV / NC_010837
Centrosema yellow spot virus / CenYSV / NC_016998
Cleome golden mosaic virus / ClGMV / NC_015397
Cleome leaf crumple virus / ClLCrV / NC_016578
Corchorus mottle virus / CoMoV / JQ805781
Euphorbia yellow mosaic virus / EuYMV / NC_012553
Macroptilium yellow net virus / MaYNV / NC_017001
Macroptilium yellow spot virus / MaYSV / NC_016999
Macroptilium yellow vein virus / MaYVV / NC_017000
Okra mottle virus / OMoV / NC_011181
Passionfruit severe leaf distortion virus / PSLDV / NC_012786
Sida common mosaic virus / SiCmMV / EU710751
Sida micrantha mosaic virus / SiMMV / NC_005330
Sida mosaic Alagoas virus / SiMAlV / NC_016573
Sida mosaic Brazil virus / SiMBV / FN436001
Sida mottle Alagoas virus / SiMoAV / NC_020256
Sida mottle virus / SiMoV / NC_004637
Sida yellow blotch virus / SiYBlV / NC_020254
Sida yellow mosaic Alagoas virus / SiYMAV / NC_020255
Sida yellow mosaic virus / SiYMV / NC_004639
Sida yellow leaf curl virus / SiYLCV / EU710750
Sida yellow net virus / SiYNV / NC_020253
Soybean chlorotic spot virus / SoClSV / NC_018457
Tomato chlorotic mottle virus / ToCMoV / NC_003664
Tomato common mosaic virus / ToCmMV / NC_010835
Tomato golden mosaic virus / TGMV / NC_001507
Tomato leaf distortion virus / ToLDV / EU710749
Tomato mild mosaic virus / ToMlMV / NC_010833
Tomato mottle leaf curl virus / ToMoLCV / JF803250
Tomato rugose mosaic virus / ToRMV / NC_002555
Tomato severe rugose virus / ToSRV / NC_009607
Tomato yellow spot virus / ToYSV / NC_007726
Tomato yellow vein streak virus / ToYVSV / NC_010949
Other countries in South America
Abutilon mosaic Bolivia virus / AbMBoV / NC_015045
Bean chlorosis virus / BeCV / NC_019569
Melon chlorotic mosaic virus / MClMV / NC_014380
Potato yellow mosaic virus / PYMV / NC_001934
Sida mosaic Bolivia vírus 1 / SiMBolV1 / NC_015046
Sida mosaic Bolivia vírus 2 / SiMBoV2 / NC_015043
Soybean blistering mosaic virus / SoBlMV / EF016486
Tomato chlorotic leaf distortion virus / TCLDV / NC_015962
Tomato dwarf leaf virus / ToDLV / NC_016580
Tomato leaf deformation virus / ToLDeV / NC_019032
Tomato mosaic leaf curl virus / ToMLCV / NC_005850
Tomato rugose yellow leaf curl virus / ToRYLCV / NC_020257
Tomato yellow margin leaf curl virus / ToYMLCV / NC_005852