Supplementary Table 1. List of Accessions Used in Analysis, Berry Skin

Supplementary Table 1. List of accessions used in analysis, berry skin

color phenotype, source of accession and indication of inclusion in color

sport or mutation pool..

Accession / Berry skin colora / Location / Mutant pool
Aramon blanc / B / Vassal / X
Arbois / B / Vassal
Aspiran blanc / B / Vassal / X
Assali al arous / B / Vassal
Attilio Ragioneri= Pirovano 150 / B / Vassal
Aubin / B / Vassal
Avgoulato / B / Vassal
Bayad / B / Vassal
Beala debela / B / Vassal
Bia blanc / B / Vassal
Blanc Dame / B / Vassal
Botun / B / Vassal
Buckland sweet water / B / Vassal
Calitor blanc / B / Vassal / X
Cannon Hall p.e. / B / Vassal
Chardonnay / B / Vassal / X
Chardonnay musqué / B / Vassal / X
Chasselas / B / Vassal / X
Chasselas lacinifolié / B / Vassal / X
Chenin blanc / B / Vassal
Ciclopica = Pirovano 60 / B / Vassal
Citronelle / B / Vassal
Clairette / B / Vassal
Colombard / B / Vassal
Conca d'ora = Paulsen 152 / B / Vassal
Dimiat / B / Vassal
Dona Maria =Leao Ferreira da Almeida 31-54-41 / B / Vassal
Emerald seedless / B / Vassal
Ezerjo / B / Vassal
Gamay Castille mutation blanche / B / Vassal / X
Grenache blanc / B / Vassal / X
Grolleau blanc / B / Vassal / X
Hassaine / B / Davis
Honigler / B / Vassal
Jahafi / B / Vassal
Kishmishi / B / Davis
Krakhouna / B / Vassal
Latina =Pirovano 711 / B / Vassal
Madeleine angevine Oberlin / B / Vassal
Mantheudo / B / Vassal
Mauzac / B / Vassal / X
Monemvassia / B / Vassal
Montils / B / Vassal
Mouchketny / B / Vassal
Muscat d'Alexandrie / B / Vassal / X
Muscat d'Ouzbekistan / B / Vassal
Muscat Oberlin / B / Vassal
Muscat Ottonel / B / Vassal
Muscat pt gr / B / Vassal / X
Ofner / B / Vassal
Ortega = Würzburg B 48-21-4 / B / Vassal
Pascal / B / Vassal
Pergrandis =Pirovano 388 / B / Vassal
Perruno / B / Vassal
Peverella / B / Vassal
Phakhri / B / Vassal
Picadillo blanco / B / Vassal
Picolit / B / Vassal
Pinot blanc / B / Vassal / X
Piquepoul blanc / B / Vassal / X
Princeps = Pirovano 357 / B / Vassal
Ribolla gialla / B / Vassal
Riesling / B / Vassal / X
Sacy / B / Vassal
Sarfeher / B / Vassal
Sauvignon / B / Vassal / X
Savagnin blanc / B / Vassal / X
Scheurebe / B / Vassal
Shenidani / B / Vassal
Subirat Parent / B / Vassal
Sult- Gora Chirine / B / Vassal / X
Sultanina / B / Vassal / X
Sylvaner / B / Vassal / X
Taschly / B / Vassal
Terret blanc / B / Vassal / X
Treixadura / B / Vassal
Trieste = Pirovano 299 = / B / Vassal
Trollingi feher / B / Vassal
Turruntes / B / Vassal
Ugni blanc / B / Vassal / X
Verjus / B / Vassal
Vernaccina / B / Vassal
Vidal 31 / B / Vassal
Viognier / B / Vassal
Aramon gris / G / Vassal / X
Aspiran gris / G / Vassal / X
Béquignol gris / G / Vassal / X
Calitor gris / G / Vassal / X
Carignan gris / G / Vassal / X
Gamay gris / G / Vassal / X
Grenache gris / G / Vassal / X
Grolleau gris / G / Vassal / X
Merlot gris / G / Vassal / X
Mourvèdre gris / G / Vassal / X
Pinot gris / G / Vassal / X
Piquepoul gris / G / Vassal / X
Sauvignon gris / G / Vassal / X
Terret gris / G / Vassal / X
Affenthaler / N / Vassal
Aglianico / N / Vassal
Alabar noir / N / Vassal
Aramon / N / Vassal / X
Aspiran noir / N / Vassal / X
Béquignol / N / Vassal / X
Borraçal / N / Vassal
Bouillet / N / Vassal
Cabernet Franc / N / Vassal
Cabernet x Malbec n°1 / N / Vassal
Calitor / N / Vassal / X
Camaraou / N / Vassal
Carignan / N / Vassal
Cep rouge / N / Vassal
Chirvan chakhi / N / Vassal
Csoka szöllö / N / Vassal
Durif / N / Vassal
Estaca saoumo / N / Vassal
Gamay / N / Vassal / X
Gouget / N / Vassal
Grenache / N / Vassal / X
Grolleau / N / Vassal / X
Gros Colman = Dodrelabi = Fruher welscher / N / Vassal
Gueuche noir / N / Vassal
Jardovany fekete / N / Vassal
Joubertin / N / Vassal
Kadarka / N / Vassal
Kandahari / N / Davis
Lledoner pelut / N / Vassal
Malbec / N / Vassal
Malvarisco / N / Vassal
Mancin / N / Vassal
Merlot / N / Vassal / X
Meunier / N / Vassal
Meunier Court Maillé / N / Vassal
Molinara / N / Vassal
Morenillo / N / Vassal
Mourisco tinto / N / Vassal
Mourvèdre / N / Vassal / X
Nava / N / Vassal
Negrara trentina / N / Vassal
Nerello mascalese / N / Vassal
Odesky tcherny / N / Vassal
Oeillade bouschet n°4 / N / Vassal
Papadiko / N / Vassal
Petit Bouschet x Aramon n°1 / N / Vassal
Petit Bouschet x Aramon n°4 / N / Vassal
Pinot noir / N / Vassal / X
Pinot précoce noir / N / Vassal / X
Pinot teinturier / N / Vassal / X
Pinot tête de nègre / N / Vassal / X
Piquepoul noir / N / Vassal / X
Pizzutello nero / N / Vassal
Pletchistik / N / Vassal
Saint Laurent / N / Vassal
Salba / N / Vassal
Skylopnichtis / NR / Vassal
Soinouri / N / Vassal
Syrah / N / Vassal
Tempranillo / N / Vassal
Terret noir / N / Vassal / X
Verdejo negro / N / Vassal
Viola = Dalmasso XVIII-3 / N / Vassal
Negra corriente / NR / Vassal
Pinot rouge / NR / Vassal / X
Sauvignon rouge / NR / Vassal
Alicante Bouschet / N / Vassal
Gamay Fréaux / N / Vassal / X
Aspiran rouge foncé / Rg / Vassal / X
Chasselas rouge / Rg / Vassal / X
Ferral tamara / Rg / Vassal
Flame seedless / Rg / Vassal
Frankenthal rouge foncé / Rg / Vassal
Kincsem / Rg / Vassal
Molinera gorda / Rg / Vassal
Monukka / Rg / Davis
Muscat d'Alexandrie Rg / Rg / Vassal / X
Muscat pt gr Rg / Rg / Vassal / X
Roussaïtis / Rg / Vassal
Santa Morena / Rg / Vassal
Sultanina rouge / Rg / Vassal / X
Sylvaner blau / NR / Vassal / X
Sylvaner rot / Rg / Vassal / X
Takhani / Rg / Davis
Ugni rouge / Rg / Vassal / X
Chardonnay rose / Rs / Vassal / X
Chasselas rose / Rs / Vassal / X
Coada vulpii / Rs / Vassal
Gewürztraminer / Rs / Vassal / X
Goher valtözö / Rs / Vassal
Grec rouge / Rs / Vassal
Hansen rot / Rs / Vassal
Heunisch rose / Rs / Vassal
Kandahar / Rs / Davis
Kishmish Sork / Rs / Davis
Mauzac rose / Rs / Vassal / X
Moscatel rosado / Rs / Vassal
Principessa di Piemonte = Pirovano 108 / Rs / Vassal
Riesling rouge / Rs / Vassal
Savagnin rose / Rs / Vassal / X
Siegerrebe = Scheu 7957 / Rs / Vassal
Sultanina rose / Rs / Vassal / X
Yaï isioum rosovy / Rs / Vassal

aB=blanc/white, N=noir/black, Rs=rose/pink, Rg=rouge/red, G=gris/grey,

NR=dark red/violet

Supplementary Table 2. Polymorphic

sites identified within pigmented alleles

of VvmybA1

Sitea / Polymorphism
698 / SNP [a c]
700 / SNP [g a]
701 / SNP [a t]
702 / SNP [t a]
703 / SNP [a t]
704 / SNP [c t]
705 / SNP [t a]
706 / SNP [a t]
707 / SNP [g a]
708 / SNP [t g]
709 / SNP [c g]
710 / SNP [a g]
712 / SNP [c a]
713 / SNP [a c]
714 / SNP [a c]
717 / SNP [a c]
728 / Indel [44]
787 / Indel [829]
1630 / SNP [t c]
1634 / SNP [a c]
1647 / SNP [t c]
1659 / Indel [1]
1679 / SNP [t g]
1688 / SNP [a c]
1743 / Indel [111]
1886 / SNP [c t]
1910 / SNP [g t]
1979 / SNP [a g]
2058 / SNP [t a]
2068 / SNP [t g]
2070 / SNP [t a]
2098 / SNP [a g]
2146 / SNP [g a]
2202 / SNP [g a]
2213 / SNP [t c]
2321 / SNP [g a]
2329 / Indel [1]
2343 / SNP [a c]
2344 / Indel [1]
2378 / SNP [g a]
2386 / Indel [1]
2398 / Indel [1]
2408 / SNP [a g]
2409 / Indel [2]
2418 / Indel [1]
2422 / SNP [c t]

a Nucleotide positions are reported

relative to VvmybA1 sequence alignment