Supplementary Table 1: Annotation of Differentially Expressed Transcript Derived Fragments

Supplementary Table 1: Annotation of differentially expressed transcript derived fragments (DE-TDFs)

GA# / Length (bp) / TC# / Homology with BlastX / Blast
E-value
Binding
DV565225 / 181 / singleton / emb|CAI44933.1| N-rich protein (soybean) / 1E-05
DV565234 / 121 / singleton / gb|EEF29220.1| casein kinase II, alpha chain, putative / 1E-09
DV565282 / 67 / singleton / gbIAF300328I MAGE antigen CCF mRNA (human) / 3.0
DV565285 / 223 / singleton / gb|EEF43277.1| ubiquitin conjugating enzyme, putative (castor bean) / 1E-18
DV565222 / 178 / singleton / gb|AAQ16310.1| actin (tepary bean) / 9.0
DV565226 / 102 / TC3008 / emb|CAJ34351.1| phytohemagglutinin precursor (bean) / 5E-131
DV565218 / 253 / TC3093 / gb|AAM62421.1|AF515795_1 Drm3 (pea) / 7E-40
DV565249 / 142 / TC3697 / gb|EEF50807.1| interferon-induced guanylate-binding protein (castor bean) / 1E-59
DV565244 / 170 / TC5618 / gb|EEF37654.1| Speckle-type POZ protein, putative (castor bean) / 8E-162
DV565232 / 236 / TC7505 / gb|AAN32916.1| translation initiation factor (pea) / 1E-37
DV565280 / 115 / TC8072 / gb|ACD62790.1| BURP domain-containing protein (bean) / 3E-11
DV565225 / 181 / singleton / emb|CAI44933.1| N-rich protein (soybean) / 1E-05
Catalytic activity
DV565224 / 239 / singleton / gb|ABN05751.1| Esterase/lipase/thioesterase (Medicago) / 5E-25
DV565228 / 131 / singleton / gb|EEF28996.1| serine-threonine protein kinase, plant-type, putative / 4E-04
DV565229 / 132 / singleton / ref|XP_002283298.1| similar to Callose synthase 3 / 2E-16
DV565235 / 146 / singleton / ref|NP_192110.2| protein kinase family protein (Arabidopsis) / 1E-16
DV565237 / 136 / singleton / ref|NP_172158.1| pfkB-type carbohydrate kinase family protein (Arabidopsis) / 2E-11
DV565263 / 182 / singleton / gb|ACD56607.1| putative oxidoreductase protein (cotton) / 0.4
DV565281 / 218 / singleton / ref|NP_001130585.1| hypothetical protein LOC100191684 (maize) / 1.0
DV565283 / 142 / singleton / dbj|BAE71306.1| putative myosin heavy chain-like protein (red clover) / 0.4
DV565276 / 187 / TC3081 / ref|NP_174753.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein / 7E-138
DV565277 / 189 / TC3081 / ref|NP_174753.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein / 7E-138
DV565242 / 297 / TC7064 / emb|CAA04142.1| phospholipid glutathione peroxidase (pea) / 5E-61
DV565284 / 187 / TC7161 / gb|EEF33996.1| serine carboxypeptidase, putative (castor bean) / 1E-37
DV565268 / 263 / TC7387 / pdb|2P9O|A Chain A, Structure Of Dutpase (Arabidopsis) / 4E-37
DV565238 / 211 / TC7985 / ref|NP_172147.2| 2-oxoglutarate-dependent dioxygenase, putative (Arabidopsis) / 2E-58
Photosynthesis
DV565272 / 128 / TC3669 / sp|P16059.1|PSBP_PEA Oxygen-evolving enhancer protein 2 (pea) / 1E-64
DV565254 / 195 / TC5623 / gb|AAD27878.1| chlorophyll a/b binding protein CP29 (mung bean) / 2E-114
Transporter
DV565252 / 163 / singleton / ref|YP_303421.1| auxin efflux carrier (a-proteobacteria) / 0.6
DV565261 / 181 / singleton / gb|EEF43436.1| oligopeptide transporter, putative (castor bean) / 2E-18
DV565274 / 113 / singleton / gbIAF190652I putative integral membrane protein (sec61) (bean) / 1E-18
DV565267 / 289 / TC7269 / gb|ABY57763.1| extracellular Ca2+ sensing receptor (soybean) / 3E-71
Defence response
DV565214 / 71 / CB539429 / gbIAAV31175.1I putative disease resistance protein (potato) / 5.0
DV565273 / 91 / singleton / gbIAF506028.1I Poncirus trifoliata citrus tristeza virus resistance gene locus / 4E-03
DV565289 / 99 / singleton / dbj|BAG68656.1| jasmonate ZIM-domain protein 2 (tabacco) / 1.0
DV565278 / 199 / TC7791 / gb|ACA23207.1| Kunitz trypsin protease inhibitor (soybean) / 1E-48
DV565269 / 115 / TC7795 / gb|AAS57912.1| 70 kDa heat shock cognate protein 1 (mung bean) / 2E-96
DV565215 / 104 / TC8185 / gb|AAP22955.1| Potyvirus VPg interacting protein (pea) / 1E-12
Enzyme or transcription regulator
DV565251 / 155 / singleton / ref|NP_199814.1| invertase/pectin methylesterase inhibitor family protein / 0.1
DV565240 / 221 / singleton / gb|EEF43834.1| bcr-associated protein, bap, putative (castor bean) / 9E-08
DV565250 / 216 / singleton / gb|AAC62900.1| putative SNF2 subfamily transcriptional activator / 2E-16
DV565290 / 103 / singleton / gb|EEF37666.1| serine/threonine protein kinase, putative (castor bean) / 2E-08
DV565270 / 140 / TC4902 / sp|Q96453.1|1433D_SOYBN 14-3-3-like protein D / 5E-140
DV565239 / 227 / TC7634 / gb|EEF46896.1| two-component system sensor histidine kinase (castor bean) / 4E-36
DV565241 / 224 / TC7634 / gb|EEF46896.1| two-component system sensor histidine kinase (castor bean) / 4E-36
DV565287 / 207 / TC7680 / ref|NP_188044.1| phosphatidylinositol-4-phosphate 5-kinase family protein / 7E-72
Response to stimulus
DV565220 / 178 / singleton / gb|EEF35848.1| brca1 associated ring domain, putative (castor bean) / 6E-12
DV565245 / 170 / TC4349 / gb|AAB88172.1| catalase (soybean) / 0
DV565260 / 218 / TC4731 / sp|Q01516.1|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (pea) / 0
DV565262 / 228 / TC4731 / sp|Q01516.1|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (pea) / 0
DV565265 / 218 / TC4731 / sp|Q01516.1|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (pea) / 0
DV565266 / 224 / TC4731 / sp|Q01516.1|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (pea) / 0
DV565256 / 286 / TC7180 / gb|EEF37498.1| Poly(A) polymerase alpha, putative (castor bean) / 6E-42
DV565257 / 285 / TC7180 / gb|EEF37498.1| Poly(A) polymerase alpha, putative (castor bean) / 6E-42
Unknown function
DV565216 / 112 / singleton / gb|ACN57307.1| At1g65450-like protein [Capsella grandiflora] / 0.5
DV565221 / 174 / singleton / ref|XP_002277033.1| PREDICTED: hypothetical protein (wine grape) / 0.5
DV565271 / 258 / singleton / ref|XP_002277984.1| PREDICTED: hypothetical protein (wine grape) / 2E-03
DV565291 / 263 / singleton / ref|XP_002262625.1| PREDICTED: hypothetical protein (castor bean) / 1E-06
DV565219 / 269 / TC4581 / gb|EEF29051.1| conserved hypothetical protein (castor bean) / 9E-107
DV565246 / 200 / TC4965 / gb|EEF43054.1| conserved hypothetical protein (castor bean) / 1E-40
DV565247 / 220 / TC4965 / gb|EEF43054.1| conserved hypothetical protein (castor bean) / 1E-40
DV565264 / 203 / TC6787 / dbj|BAH20096.1| AT3G01130 (Arabidopsis) / 2E-10
DV565223 / 240 / TC6879 / gb|EEF28810.1| conserved hypothetical protein (castor bean) / 6E-94
DV565248 / 114 / TC7375 / ref|XP_002273337.1| PREDICTED: hypothetical protein (wine grape) / 5E-19
DV565217 / 115 / singleton / No significant similarity found
DV565227 / 77 / singleton / No significant similarity found
DV565230 / 182 / singleton / No significant similarity found
DV565231 / 231 / singleton / No significant similarity found
DV565233 / 88 / singleton / No significant similarity found
DV565236 / 134 / singleton / No significant similarity found
DV565243 / 87 / singleton / No significant similarity found
DV565253 / 174 / singleton / No significant similarity found
DV565275 / 128 / singleton / No significant similarity found
DV565279 / 99 / singleton / No significant similarity found
DV565286 / 106 / singleton / No significant similarity found
DV565288 / 128 / singleton / No significant similarity found
DV565258 / 112 / TC8093 / No significant similarity found
DV565259 / 115 / TC8093 / No significant similarity found