Instream Flow Council Instream Flow and Stream Ecology Literature (Last Updated 11/30/09)

Instream Flow Council – Instream flow and stream ecology literature (Last Updated 11/30/09)

IFC Instream Flow Literature Reference list (last updated March 30, 2008)

Aadland, Luther P. 1993. Stream habitat types: their fish assemblages and relationship to flow. North American Journal of Fisheries Management 13 (4): 790-805.

Aadland, L.P., C.M. Cook, M.T. Negus, H.G. Drewes, and C.S. Anderson. 1991. Microhabitat preferences of selected stream fishes and a community-oriented approach to instream flow assessments. Section of Fisheries, Minnesota Department of Natural Resources, St. Paul, MN.

Aadland, L., Waltner, C., Negus, M.T., Drews, H.,... 1989. Microhabitat criteria for selected stream fishes and methodological considerations for instream flow studies in Minnesota.: St. Paul, Minnesota Department of Natural Resources Technical Report

Abbe, T.B., and D.R. Montgomery. 1996. Large woody debris jams, channel hydraulics and habitat formation in large rivers. Regulated Rivers 12: 201-221.

Abe, T., and F. Nakamura. 1999. Effects of experimental removal of woody debris on channel morphology and fish habitats. Ecol. Civil. Eng. 2: 179-190. [in Japanese with English abstract]

Achord, S., P.S. Levin, and R.W. Zabel. 2003. Density dependent mortality in Pacific salmon: the ghost of impacts past? Ecology Letters 6: 335-342.

Adams, J.B., G.C. Bate, T.D. Harrison, P. Huizinga, S. Taljaard, L. van Niekerk, E.E. Plumstead, A.K. Whitfield, and T.H. Wooldridge. 2002. A method to assess the freshwater inflow requirements of estuaries and application to the Mtata Estuary, South Africa. Estuaries 25 (6B): 1382-1393.

Adams, J.B., W.T. Knoop, and G.C. Bate. 1992. The distribution of estuarine macrophytes in relation to freshwater. Botanica Marina 35: 69-75.

Adams, J.B. and M.M.B. Talbot. 1992. The influence of river impoundment on the estuarine seagrass Zostera capensis Setchall. Botanica Marina 35: 69-75.

Adams, K.N., and A.M. Fowler. 2006. Improving empirical relationships for predicting the effect of vegetation change on annual water yield. Journal of Hydrology 32: 90-115.

Adams, S.B., and M.L. Warren, Jr. 2005. Recolonization by warmwater fishes and crayfishes after severe drought in upper coastal plain hill streams. Transactions of the American Fisheries Society 134: 1173-1192.

Adams, S.R., J.J. Hoover, and K.J. Killgore. 1999. Swimming endurance of juvenile pallid sturgeon, Scaphirhynchus albus. Copeia 1999: 802-807.

Adams, S.R., J.J. Hoover, and K.J. Killgore. 2000. Swimming performance of the Topeka shiner (Notropis topeka) an endangered midwestern minnow. American Midland Naturalist 144: 178-186.

Adams, W.M. 1992. Wasting the Rain: Rivers, People, and Planning in Africa. Earthscan Publications, London.

Addley, R.C. 1993. A mechanistic approach to modeling habitat needs of drift-feeding salmonids. Masters thesis, Department of Civil and Environmental Engineering, Utah State University, Logan, Utah.

Aebischer, N.J., P.A. Robertson, and R.E. Kenward. 1993. Compositional analysis of habitat use from animal radio-tracking data. Ecology 74: 1313-1325.

Ahearn, D.S., R.W. Sheibley, and R.A. Dahlgren. 2005. Effects of river regulation on water quality in the lower Mokelumne River, California. River Research and Applications 21: 651-670.

Ahmadi-Nedush, B., A. St. Hilaire, M. Berube, E. Robichaud, N. Thiemonge, and B. Bobee. 2006. A review of statistical methods for the evaluation of aquatic habitat suitability for instream flow assessment. River Research and Applications 22: 503-523.

Aho, J.M., Anderson, C.S., and Terrell, J.W. 1986. Habitat suitability index models and instream flow suitability curves: redbreast sunfish. Washington, D.C.: U.S. Fish and Wildlife Service (Biological Report 82 [10.119]).

Alabaster, John S. 1970. River flow and upstream movement and catch of migratory salmonids. Journal of Fish Biology 2: 1-13.

Albanese, B., P.L. Angermeier, and S. Dorai-Raj. 2004. Ecological correlates of fish movement in a network of Virginia streams. Canadian Journal of Fisheries and Aquatic Sciences 61: 857-869.

Alber, M. 2002. A conceptual model of estuarine freshwater inflow management. Estuaries 25 (6B): 1246-1261.

Alber, M., and J.E. Sheldon. 1999. Use of a date-specific method to examine variability in the flushing times of Georgia estuaries. Estuaries, Coastal and Shelf Science 49: 469-482.

Al-Chokhachy, R., and P. Budy. 2007. Summer microhabitat use of fluvial bull trout in eastern Oregon streams. North American Journal of Fisheries Management 27 (4): 1068-1081.

Aleem, A.A. 1972. Effect of river outflow management on marine life. Marine Biology 15: 200-208.

Alexander, C.A.D., C.N. Peters, D.R. Marmorek, and P. Higgins. 2006. A decision analysis of flow management experiments for Columbia River mountain whitefish (Prosopium williamsoni) management. Canadian Journal of Fisheries and Aquatic Sciences 63 (5): 1142-1156.

Alexander, H.D., and K.H. Dunton. 2002. Freshwater inundation effects on emergent vegetation of a hypersaline salt marsh. Estuaries 25 (6B): 1426-1435.

Alexander, R.B., E.W. Boyer, R.A. Smith, and G.E. Schwarz. 2007. The role of headwater streams in downstream water quality. Journal of the American Water Resources Association 43: 41-59.

Alexander, R.B., R.A. Smith, and G.E. Schwarz. 2000. Effects of stream channel size on the delivery of nitrogen to the Gulf of Mexico. Nature 403:758-761.

Alfredsen, K. 1997. A modelling system for estimation of impacts on fish habitat. Page 6 in: 27th International Association for Hydraulic Research Congress: Water for a changing society. IAHR, San Francisco.

Alfredsen, K., P. Borsanyi, A. Harby, H.-P. Fjeldstad, and S.-E. Wersland. 2004. Application of habitat modelling in river rehabilitation and artificial habitat design. Hydroecologie Appliquee 14 (1): 105-117.

Alfredsen, K., W. Marchand, T.H. Bakken, and A. Harby. 1997. Application and comparison of computer models quantifying impacts of river regulation on fish habitat. In: Brodh, E., D.K. Lysne, N. Flatabo, and E. Helland-Hansen, eds. Proceedings of the 3rd international conference hydropower ‘97 - Trondheim/Norway 30 June-2 July 1997. A.A. Balkema Publishers, Rotterdam/Brookfield.

Alfredsen, K., and Tesaker. 2002. Winter habitat assessment strategies and incorporation of winter habitat in the Norwegian habitat assessment tools. Hydrological Processes 16 (4): 927-936.

Ali, A.B., and B.A. Kadir. 1996. The reproductive biology of the cyprinid, Thymnichthys thymnoides (Bleeker), in the Chenderoh Reservoir, a small tropical reservoir in Malaysia. Hydrobiologia 318: 139-151.

Alkins-Koo, M. 2000. Reproductive timing of fishes in a tropical intermittent stream. Environmental Biology of Fishes 57: 49-66.

Allan, J.D. 2004. Landscapes and riverscapes: the influence of land use on stream ecosystems. Annual Review of Ecology, Evolution, and Systematics 35: 257-284.

Allan, J.D., D.L. Erickson, and J. Fay. 1997. The influence of catchment land use on stream integrity across multiple spatial scales. Freshwater Biology 37: 149-162.

Allan, J.D., and B.P. Feifarek. 1989. Distances traveled by drifting mayfly nymphs: factors influencing return to the substrate. Journal of the North American Benthological Society 8: 322-330.

Allanson, B.R., and G.H.L. Read. 1995. Further comment on the response of Eastern Cape Province estuaries to variable freshwater inflows. Southern African Journal of Aquatic Science 21: 56-70.

Allee, B.A. 1974. Spatial requirements and behavioral interactions of juvenile coho salmon (Oncorhynchus kisutch) and steelhead trout (Salmo gairdneri). Doctoral dissertation, University of Washington, Seattle.

Allen, M.A. 1986. Population dynamics of juvenile steelhead trout in relation to density and habitat characteristics. Master’s thesis. Humboldt State University, Arcata, California.

Allen, M.A. 2000. Seasonal microhabitat use by juvenile spring chinook salmon in the Yakima River basin, Washington. Rivers 7 (4): 314-332.

Allison, S.K. 1996. Recruitment and establishment of salt marsh plants following disturbance by flooding. American Midland Naturalist 136: 232-247.

Allman, R.J., and C.B. Grimes. 1998. Growth and mortality of little tunny, Euthynnus alletteratus, from the Mississippi River discharge plume and Panama City, Florida. Bulletin of Marine Science 62 (1): 189-197.

Allouche, S., and P. Gaudin. 2001. Effects of avian predation threat, water flow, and cover on growth and habitat use by chub, Leuciscus cephalus, in an experimental stream. Oikos 94: 481-492.

Alpert, P., F.T. Griggs, and D.R. Peterson. 1999. Riparian forest restoration along large rivers: initial results from the Sacramento River Project. Restoration Ecology 7: 360-368.

Amadio, C.J., W.A. Hubert, K. Johnson, D. Oberlie, and D. Dufek. 2005. Factors affecting the occurrence of saugers in small, high-elevation rivers near the western edge of the species’ natural distribution. Transactions of the American Fisheries Society 134 (1): 160-171.

Ambuhl, Von Heins. 1959. The significance of flow as an ecological factor. (Transl. By John DeWitt, Humboldt State College, Arcata, California.)

American Rivers, Friends of the Earth, and Trout Unlimited. 1999. Dam Removal Success Stories: Restoring Rivers Through Selective Removal of Dams That Don’t Make Sense. Washington, D.C.

Ames, J. 1983. Salmon stock interactions in Puget Sound: a preliminary look. Pages 84‑95 in: M.A. Miller (ed.). Southeast Alaska coho salmon research and management review and planning workshop, May 18‑19, 1982. Alaska Dept. Fish and Game, Juneau.

Ames, J., and H. Beecher. 1995. Recommended spawning flows for Cedar River sockeye salmon: with a review of spawning distribution and flood risk studies. A report to the Cedar River Instream Flow Committee. Washington Department of Fish and Wildlife, Olympia. 108 pp.

Ames, J., and H. Beecher. 2001. Incorporating flood risk into controlled flow regimes for Pacific salmon: An example using Cedar River sockeye salmon. Report #FPT 01-13. Washington Department of Fish and Wildlife, Olympia. 123 pp.

Amlin, N.M., and S.B. Rood. 2002. Comparative tolerances of riparian willows and cottonwoods to water table decline. Wetlands 22: 338-346.

Amlin, N.M., and S.B. Rood. 2003. Drought stress and recovery of riparian cottonwoods due to water table alteration along Willow Creek, Alberta. Trees 17: 351-358.

Amoros, C. 1991. Changes in side-arm connectivity and implications for river system management. Rivers 2: 105-112.

Amoros, C., and G. Bornette. 2002. Connectivity and biocomplexity in water bodies of riverine floodplains. Freshwater Biology 47: 761-776.

Amoros, C., A.L. Roux, J.L. Reygrobellet, J.P. Bravard, and G. Pautou. 1987. A method for applied ecological studies of fluvial hydrosystems. Regulated Rivers Research & Management 1: 17-38.

Amos, C.L. 2006. The influence of vegetation on turbulence and flow velocities in European salt marshes. Sedimentology 53 (2): 259-277.

Anderson, A.A., C. Hubbs, K.O. Winemiller, and R.J. Edwards. 1995. Texas freshwater fish assemblages following three decades of environmental change. Southwestern Naturalist 40: 314-321.

Anderson, D.H. 1995. Microcrustacean growth and production in a forested floodplain swamp. Dissertation, University of Alabama, Tuscaloosa, Alabama, USA.

Anderson, H.W. 1976. Fire effects on water supply, floods, and sedimentation. Proceedings, Tall Timbers Fire Ecology Conference 15: 249-260.

Anderson, J.H., and T.P. Quinn. 2007. Movement of adult coho salmon (Oncorhynchus kisutch) during colonization of newly accessible habitat. Canadian Journal of Fisheries and Aquatic Sciences 64 (8): 1143-1154.

Anderson, K.E., A.J. Paul, E. McCauley, L.J. Jackson, J.R. Post, and R.M. Nisbet. 2006. Instream flow needs in streams and rivers: the importance of understanding ecological dynamics. Frontiers in Ecology and the Environment 4 (6): 309-318.

Anderson, P.C., T.B. Hardy, and C.M.U. Neale. 1993. Application of multispectral videography for the delineation of riverine depths and mesoscale hydraulic features. In: Neale, C.M.U. (Ed.), Proceedings of the 14th Biennial Workshop on Color Photography and Videography for Resource Monitoring. Utah State University, Logan, Utah, May 25-28, 1993.

Anderson, R.M., and Nehring, R.B. 1985. Impacts of stream discharge on trout rearing and recruitment in the South Platte River, Colorado. Pp. 59-64 in: Olson, F.W., White, R.G., and Hamre, R.H. (Eds.), Proceedings of the Symposium on Small Hydropower and Fisheries. American Fisheries Society, Bethesda.

Anderson, S.P., W.E. Dietrich, D.R. Montgomery, R. Torres, M.E. Conrad, and K. Loague. 1997. Subsurface flow paths in a steep, unchanneled catchment. Water Resources Research 33: 2637-2653.

Andersson, E., C. Nilsson, and M.E. Johansson. 2000. Effects of river fragmentation on plant dispersal and riparian flora. Regulated Rivers: Research and Management 16 (1): 83-89.

Andrew, F.J., and G.H. Green. 1960. Sockeye and pink salmon production in relation to proposed dams in the Fraser River system. Internat. Pac. Salmon Fish. Comm., Bull. 11. 257 p.

Andrews, E.D. 1980. Effective and bankfull discharges of streams in the Yampa River basin, Colorado and Wyoming. Journal of Hydrology 46: 311-330.

Andrews, E.D. 1983. Entrainment of gravel from naturally sorted riverbed material. Geological Society of America Bulletin 94: 1225-1231.

Andrews, E.D. 1984. Bed-material entrainment and hydraulic geometry of gravel-bed rivers in Colorado. Geological Society of America Bulletin 95: 371-378.

Andrews, E.D. 1986. Downstream effects of Flaming Gorge Reservoir on the Green River, Colorado and Utah. Geological Society of America Bulletin 97: 1012-1023.

Andrews, E.D., and J.M. Nankervis. 1995. Effective discharge and design of channel maintenance flows for gravel-bed rivers. Pp. 151-164 in: J.E. Costa, A.J. Miller, K.W. Potter, and P.R. Wilcock (eds.), Natural and Anthropogenic Influences in Fluvial Geomorphology, Geophysical Monograph 89, American Geophysical Union.

Angermeier, P.L. 1987. Spatiotemporal variation in habitat selection by fishes in small Illinois streams. Pp 52-60 in: W.J. Matthews and D.C. Heins (eds) Community and evolutionary ecology of North American stream fish. University of Oklahoma Press, Norman.

Angermeier, P.L. 1992. Predation by rock bass on other stream fishes: experimental effects of depth and cover. Environmental Biology of Fishes 34: 171-180.

Angermeier, P.L., and J.R. Karr. 1984. Relationships between woody debris and fish habitat in a small warmwater stream. Transactions of the American Fisheries Society 113: 716-726.

Angermeier, P.L., and I.J. Schlosser. 1989. Species-area relationships for stream fishes. Ecology 70 (5): 1450-1462.

Annear, T., I. Chisholm, H. Beecher, A. Locke, P. Aarrestad, N. Burkhart, C. Coomer, C. Estes, J. Hunt, R. Jacobson, G. Jobsis, J. Kauffman, J. Marshall, K. Mayes, C. Stalnaker, and R. Wentworth. 2002. Instream Flows for Riverine Resource Stewardship. Instream Flow Council, Cheyenne, WY.

Annear, T., I. Chisholm, H. Beecher, A. Locke, P. Aarrestad, C. Coomer, C. Estes, J. Hunt, R. Jacobson, G. Jobsis, J. Kauffman, J. Marshall, K. Mayes, G. Smith, R. Wentworth, and C. Stalnaker. 2004. Instream Flows for Riverine Resource Stewardship - Revised Edition. Instream Flow Council, Cheyenne, WY.

Annear, T.C., and A.L. Conder. 1984. Relative bias of several fisheries instream flow methods. North American Journal of Fisheries Management 4 (4B): 531-539.

Antolos, M., D.D. Roby, D.E. Lyons, K. Collis, A.F. Evans, M. Hawbecker, and B.A. Ryan. 2005. Caspian tern predation on juvenile salmonids in the mid-Columbia River. Transactions of the American Fisheries Society 134 (2): 466-480.

Antonnson, T., and S. Gudjonsson. 2002. Variability in timing and characteristics of Atlantic salmon smolt in Icelandic rivers. Transactions of the American Fisheries Society 131 (4): 643-655.

Ardisson, P.-L., and E. Bouget. 1997. A study of the relationship between freshwater runoff and benthic abundance: A scale-oriented approach. Estuarine, Coastal and Shelf Science 45: 535-545.

Armitage, P.D. 1978. Downstream changes in the composition, numbers and biomass of bottom fauna in the Tees below Cow Green Reservoir and in an unregulated tributary Maize Beck, in the first five years after impoundment. Hydrobiologia 58 (2): 145-156.

Armour, C.L. 1991. Evaluation of the instream flow incremental methodology by U.S. Fish and Wildlife Service field users. Fisheries 16: 36-43.