Supplementary Table S2: List of the Elements Detected in RIP1 Promoter by In-Silico Analysis

Supplementary Table S2: List of the elements detected in RIP1 promoter by in-silico analysis.

Database File: user.dat Factor or Site Name Loc.(Str.) Signal Sequence SITE # ______-10PEHVPSBD site 743 (-) TATTCT S000392 -300ELEMENT site 723 (+) TGHAAARK S000122 -300ELEMENT site 555 (-) TGHAAARK S000122 -300ELEMENT site 1047 (-) TGHAAARK S000122 ACGTABOX site 142 (+) TACGTA S000130 ACGTABOX site 142 (-) TACGTA S000130 ACGTATERD1 site 110 (+) ACGT S000415 ACGTATERD1 site 143 (+) ACGT S000415 ACGTATERD1 site 1011 (+) ACGT S000415 ACGTATERD1 site 110 (-) ACGT S000415 ACGTATERD1 site 143 (-) ACGT S000415 ACGTATERD1 site 1011 (-) ACGT S000415 ACGTCBOX site 1010 (+) GACGTC S000131 ACGTCBOX site 1010 (-) GACGTC S000131 ANAERO1CONSENSUS site 767 (+) AAACAAA S000477 ANAERO1CONSENSUS site 1493 (+) AAACAAA S000477 ANAERO1CONSENSUS site 175 (-) AAACAAA S000477 ANAERO2CONSENSUS site 58 (-) AGCAGC S000478 ANAERO2CONSENSUS site 73 (-) AGCAGC S000478 ARR1AT site 337 (+) NGATT S000454 ARR1AT site 398 (+) NGATT S000454 ARR1AT site 562 (+) NGATT S000454 ARR1AT site 1286 (+) NGATT S000454 ARR1AT site 404 (+) NGATT S000454 ARR1AT site 840 (+) NGATT S000454 ARR1AT site 87 (+) NGATT S000454 ARR1AT site 190 (+) NGATT S000454 ARR1AT site 231 (+) NGATT S000454 ARR1AT site 439 (+) NGATT S000454 ARR1AT site 213 (-) NGATT S000454 ARR1AT site 508 (-) NGATT S000454 ARR1AT site 522 (-) NGATT S000454 ARR1AT site 541 (-) NGATT S000454 ASF1MOTIFCAMV site 1009 (+) TGACG S000024 BIHD1OS site 1207 (-) TGTCA S000498 BIHD1OS site 1248 (-) TGTCA S000498 BIHD1OS site 1363 (-) TGTCA S000498 BOXIINTPATPB site 673 (+) ATAGAA S000296 CAATBOX1 site 425 (+) CAAT S000028 CAATBOX1 site 448 (+) CAAT S000028 CAATBOX1 site 461 (+) CAAT S000028 CAATBOX1 site 511 (+) CAAT S000028 CAATBOX1 site 526 (+) CAAT S000028 CAATBOX1 site 540 (+) CAAT S000028 CAATBOX1 site 586 (+) CAAT S000028 CAATBOX1 site 596 (+) CAAT S000028 CAATBOX1 site 647 (+) CAAT S000028 CAATBOX1 site 696 (+) CAAT S000028 CAATBOX1 site 811 (+) CAAT S000028 CAATBOX1 site 1175 (+) CAAT S000028 CAATBOX1 site 1214 (+) CAAT S000028 CAATBOX1 site 1377 (+) CAAT S000028 CAATBOX1 site 233 (-) CAAT S000028 CAATBOX1 site 379 (-) CAAT S000028 CAATBOX1 site 649 (-) CAAT S000028 CAATBOX1 site 1151 (-) CAAT S000028 CAATBOX1 site 1200 (-) CAAT S000028 CACTFTPPCA1 site 23 (+) YACT S000449 CACTFTPPCA1 site 273 (+) YACT S000449 CACTFTPPCA1 site 860 (+) YACT S000449 CACTFTPPCA1 site 979 (+) YACT S000449 CACTFTPPCA1 site 1092 (+) YACT S000449 CACTFTPPCA1 site 1104 (+) YACT S000449 CACTFTPPCA1 site 148 (+) YACT S000449 CACTFTPPCA1 site 276 (+) YACT S000449 CACTFTPPCA1 site 311 (+) YACT S000449 CACTFTPPCA1 site 797 (+) YACT S000449 CACTFTPPCA1 site 935 (+) YACT S000449 CACTFTPPCA1 site 956 (+) YACT S000449 CACTFTPPCA1 site 1130 (+) YACT S000449 CACTFTPPCA1 site 282 (-) YACT S000449 CACTFTPPCA1 site 375 (-) YACT S000449 CACTFTPPCA1 site 736 (-) YACT S000449 CACTFTPPCA1 site 827 (-) YACT S000449 CACTFTPPCA1 site 870 (-) YACT S000449 CACTFTPPCA1 site 891 (-) YACT S000449 CACTFTPPCA1 site 911 (-) YACT S000449 CACTFTPPCA1 site 914 (-) YACT S000449 CACTFTPPCA1 site 1118 (-) YACT S000449 CACTFTPPCA1 site 1143 (-) YACT S000449 CACTFTPPCA1 site 1333 (-) YACT S000449 CACTFTPPCA1 site 1462 (-) YACT S000449 CACTFTPPCA1 site 1490 (-) YACT S000449 CANBNNAPA site 923 (+) CNAACAC S000148 CARGCW8GAT site 473 (+) CWWWWWWWWG S000431 CARGCW8GAT site 1255 (+) CWWWWWWWWG S000431 CARGCW8GAT site 1318 (+) CWWWWWWWWG S000431 CARGCW8GAT site 1414 (+) CWWWWWWWWG S000431 CARGCW8GAT site 473 (-) CWWWWWWWWG S000431 CARGCW8GAT site 1255 (-) CWWWWWWWWG S000431 CARGCW8GAT site 1318 (-) CWWWWWWWWG S000431 CARGCW8GAT site 1414 (-) CWWWWWWWWG S000431 CARGNCAT site 1254 (+) CCWWWWWWWWGG S000446 CARGNCAT site 1254 (-) CCWWWWWWWWGG S000446 CATATGGMSAUR site 1224 (+) CATATG S000370 CATATGGMSAUR site 1224 (-) CATATG S000370 CBFHV site 1409 (+) RYCGAC S000497 CCAATBOX1 site 525 (+) CCAAT S000030 CCAATBOX1 site 539 (+) CCAAT S000030 CCAATBOX1 site 695 (+) CCAAT S000030 CCAATBOX1 site 1213 (+) CCAAT S000030 CCAATBOX1 site 1200 (-) CCAAT S000030 CGACGOSAMY3 site 1076 (+) CGACG S000205 CGCGBOXAT site 968 (+) VCGCGB S000501 CGCGBOXAT site 968 (-) VCGCGB S000501 CIACADIANLELHC site 210 (-) CAANNNNATC S000252 CPBCSPOR site 1139 (+) TATTAG S000491 CTRMCAMV35S site 161 (+) TCTCTCTCT S000460 CURECORECR site 568 (+) GTAC S000493 CURECORECR site 796 (+) GTAC S000493 CURECORECR site 568 (-) GTAC S000493 CURECORECR site 796 (-) GTAC S000493 DOFCOREZM site 48 (+) AAAG S000265 DOFCOREZM site 465 (+) AAAG S000265 DOFCOREZM site 634 (+) AAAG S000265 DOFCOREZM site 727 (+) AAAG S000265 DOFCOREZM site 732 (+) AAAG S000265 DOFCOREZM site 771 (+) AAAG S000265 DOFCOREZM site 851 (+) AAAG S000265 DOFCOREZM site 868 (+) AAAG S000265 DOFCOREZM site 889 (+) AAAG S000265 DOFCOREZM site 1195 (+) AAAG S000265 DOFCOREZM site 1373 (+) AAAG S000265 DOFCOREZM site 1460 (+) AAAG S000265 DOFCOREZM site 1497 (+) AAAG S000265 DOFCOREZM site 168 (-) AAAG S000265 DOFCOREZM site 204 (-) AAAG S000265 DOFCOREZM site 308 (-) AAAG S000265 DOFCOREZM site 556 (-) AAAG S000265 DOFCOREZM site 611 (-) AAAG S000265 DOFCOREZM site 937 (-) AAAG S000265 DOFCOREZM site 953 (-) AAAG S000265 DOFCOREZM site 960 (-) AAAG S000265 DOFCOREZM site 1245 (-) AAAG S000265 DPBFCOREDCDC3 site 1331 (-) ACACNNG S000292 EBOXBNNAPA site 23 (+) CANNTG S000144 EBOXBNNAPA site 97 (+) CANNTG S000144 EBOXBNNAPA site 647 (+) CANNTG S000144 EBOXBNNAPA site 860 (+) CANNTG S000144 EBOXBNNAPA site 1224 (+) CANNTG S000144 EBOXBNNAPA site 1331 (+) CANNTG S000144 EBOXBNNAPA site 1359 (+) CANNTG S000144 EBOXBNNAPA site 23 (-) CANNTG S000144 EBOXBNNAPA site 97 (-) CANNTG S000144 EBOXBNNAPA site 647 (-) CANNTG S000144 EBOXBNNAPA site 860 (-) CANNTG S000144 EBOXBNNAPA site 1224 (-) CANNTG S000144 EBOXBNNAPA site 1331 (-) CANNTG S000144 EBOXBNNAPA site 1359 (-) CANNTG S000144 EECCRCAH1 site 841 (+) GANTTNC S000494 EECCRCAH1 site 917 (-) GANTTNC S000494 ELRECOREPCRP1 site 458 (-) TTGACC S000142 GATABOX site 196 (+) GATA S000039 GATABOX site 210 (+) GATA S000039 GATABOX site 330 (+) GATA S000039 GATABOX site 155 (-) GATA S000039 GATABOX site 713 (-) GATA S000039 GATABOX site 950 (-) GATA S000039 GATABOX site 1221 (-) GATA S000039 GATABOX site 1292 (-) GATA S000039 GATABOX site 1368 (-) GATA S000039 GATABOX site 1439 (-) GATA S000039 GATABOX site 1450 (-) GATA S000039 GT1CONSENSUS site 33 (+) GRWAAW S000198 GT1CONSENSUS site 34 (+) GRWAAW S000198 GT1CONSENSUS site 123 (+) GRWAAW S000198 GT1CONSENSUS site 210 (+) GRWAAW S000198 GT1CONSENSUS site 330 (+) GRWAAW S000198 GT1CONSENSUS site 382 (+) GRWAAW S000198 GT1CONSENSUS site 388 (+) GRWAAW S000198 GT1CONSENSUS site 590 (+) GRWAAW S000198 GT1CONSENSUS site 663 (+) GRWAAW S000198 GT1CONSENSUS site 724 (+) GRWAAW S000198 GT1CONSENSUS site 894 (+) GRWAAW S000198 GT1CONSENSUS site 1154 (+) GRWAAW S000198 GT1CONSENSUS site 287 (-) GRWAAW S000198 GT1CONSENSUS site 392 (-) GRWAAW S000198 GT1CONSENSUS site 842 (-) GRWAAW S000198 GT1CONSENSUS site 875 (-) GRWAAW S000198 GT1CONSENSUS site 303 (-) GRWAAW S000198 GT1CONSENSUS site 606 (-) GRWAAW S000198 GT1CONSENSUS site 1041 (-) GRWAAW S000198 GT1CONSENSUS site 1290 (-) GRWAAW S000198 GT1CONSENSUS site 1437 (-) GRWAAW S000198 GT1GMSCAM4 site 34 (+) GAAAAA S000453 GT1GMSCAM4 site 590 (+) GAAAAA S000453 GT1GMSCAM4 site 724 (+) GAAAAA S000453 GT1GMSCAM4 site 894 (+) GAAAAA S000453 GT1GMSCAM4 site 303 (-) GAAAAA S000453 GT1GMSCAM4 site 606 (-) GAAAAA S000453 GTGANTG10 site 226 (+) GTGA S000378 GTGANTG10 site 283 (+) GTGA S000378 GTGANTG10 site 819 (+) GTGA S000378 GTGANTG10 site 871 (+) GTGA S000378 GTGANTG10 site 892 (+) GTGA S000378 GTGANTG10 site 915 (+) GTGA S000378 GTGANTG10 site 1121 (+) GTGA S000378 GTGANTG10 site 1206 (+) GTGA S000378 GTGANTG10 site 1352 (+) GTGA S000378 GTGANTG10 site 96 (-) GTGA S000378 GTGANTG10 site 272 (-) GTGA S000378 GTGANTG10 site 493 (-) GTGA S000378 GTGANTG10 site 543 (-) GTGA S000378 GTGANTG10 site 549 (-) GTGA S000378 GTGANTG10 site 846 (-) GTGA S000378 GTGANTG10 site 1103 (-) GTGA S000378 GTGANTG10 site 1282 (-) GTGA S000378 GTGANTG10 site 1468 (-) GTGA S000378 HDZIP2ATATHB2 site 665 (-) TAATMATTA S000373 HEXMOTIFTAH3H4 site 1009 (-) ACGTCA S000053 IBOXCORE site 210 (+) GATAA S000199 IBOXCORE site 330 (+) GATAA S000199 IBOXCORE site 1291 (-) GATAA S000199 IBOXCORE site 1438 (-) GATAA S000199 INRNTPSADB site 1432 (+) YTCANTYY S000395 INRNTPSADB site 383 (-) YTCANTYY S000395 INRNTPSADB site 868 (-) YTCANTYY S000395 INRNTPSADB site 889 (-) YTCANTYY S000395 LECPLEACS2 site 1134 (+) TAAAATAT S000465 MARTBOX site 429 (+) TTWTWTTWTT S000067 MYB1AT site 975 (+) WAACCA S000408 MYB1AT site 220 (-) WAACCA S000408 MYB2AT site 1295 (-) TAACTG S000177 MYB2CONSENSUSAT site 1295 (-) YAACKG S000409 MYBCORE site 1295 (+) CNGTTR S000176 MYCATERD1 site 97 (-) CATGTG S000413 MYCATRD22 site 97 (+) CACATG S000174 MYCCONSENSUSAT site 23 (+) CANNTG S000407 MYCCONSENSUSAT site 97 (+) CANNTG S000407 MYCCONSENSUSAT site 647 (+) CANNTG S000407 MYCCONSENSUSAT site 860 (+) CANNTG S000407 MYCCONSENSUSAT site 1224 (+) CANNTG S000407 MYCCONSENSUSAT site 1331 (+) CANNTG S000407 MYCCONSENSUSAT site 1359 (+) CANNTG S000407 MYCCONSENSUSAT site 23 (-) CANNTG S000407 MYCCONSENSUSAT site 97 (-) CANNTG S000407 MYCCONSENSUSAT site 647 (-) CANNTG S000407 MYCCONSENSUSAT site 860 (-) CANNTG S000407 MYCCONSENSUSAT site 1224 (-) CANNTG S000407 MYCCONSENSUSAT site 1331 (-) CANNTG S000407 MYCCONSENSUSAT site 1359 (-) CANNTG S000407 NODCON1GM site 48 (+) AAAGAT S000461 NODCON1GM site 951 (-) AAAGAT S000461 NODCON2GM site 77 (+) CTCTT S000462 NODCON2GM site 166 (+) CTCTT S000462 NODCON2GM site 880 (+) CTCTT S000462 NODCON2GM site 958 (+) CTCTT S000462 NODCON2GM site 733 (-) CTCTT S000462 NODCON2GM site 1239 (-) CTCTT S000462 NTBBF1ARROLB site 936 (+) ACTTTA S000273 NTBBF1ARROLB site 464 (-) ACTTTA S000273 NTBBF1ARROLB site 633 (-) ACTTTA S000273 NTBBF1ARROLB site 867 (-) ACTTTA S000273 OSE1ROOTNODULE site 48 (+) AAAGAT S000467 OSE1ROOTNODULE site 951 (-) AAAGAT S000467 OSE2ROOTNODULE site 77 (+) CTCTT S000468 OSE2ROOTNODULE site 166 (+) CTCTT S000468 OSE2ROOTNODULE site 880 (+) CTCTT S000468 OSE2ROOTNODULE site 958 (+) CTCTT S000468 OSE2ROOTNODULE site 733 (-) CTCTT S000468 OSE2ROOTNODULE site 1239 (-) CTCTT S000468 P1BS site 1056 (+) GNATATNC S000459 P1BS site 1056 (-) GNATATNC S000459 POLASIG1 site 462 (+) AATAAA S000080 POLASIG1 site 631 (+) AATAAA S000080 POLASIG1 site 745 (+) AATAAA S000080 POLASIG1 site 244 (-) AATAAA S000080 POLASIG1 site 428 (-) AATAAA S000080 POLASIG2 site 170 (-) AATTAAA S000081 POLASIG2 site 353 (-) AATTAAA S000081 POLASIG2 site 1036 (-) AATTAAA S000081 POLASIG3 site 667 (-) AATAAT S000088 POLASIG3 site 995 (-) AATAAT S000088 POLASIG3 site 1024 (-) AATAAT S000088 POLASIG3 site 1158 (-) AATAAT S000088 POLASIG3 site 1319 (-) AATAAT S000088 POLASIG3 site 1381 (-) AATAAT S000088 POLLEN1LELAT52 site 624 (+) AGAAA S000245 POLLEN1LELAT52 site 641 (+) AGAAA S000245 POLLEN1LELAT52 site 675 (+) AGAAA S000245 POLLEN1LELAT52 site 1326 (+) AGAAA S000245 POLLEN1LELAT52 site 66 (-) AGAAA S000245 POLLEN1LELAT52 site 305 (-) AGAAA S000245 POLLEN1LELAT52 site 608 (-) AGAAA S000245 POLLEN1LELAT52 site 877 (-) AGAAA S000245 PREATPRODH site 1115 (-) ACTCAT S000450 PYRIMIDINEBOXOSRAMY1A site 726 (-) CCTTTT S000259 QELEMENTZMZM13 site 457 (+) AGGTCA S000254 RAV1AAT site 415 (+) CAACA S000314 RAV1AAT site 1191 (+) CAACA S000314 RAV1AAT site 1275 (-) CAACA S000314 RAV1AAT site 1342 (-) CAACA S000314 RAV1AAT site 1397 (-) CAACA S000314 RBCSCONSENSUS site 522 (+) AATCCAA S000127 RBCSCONSENSUS site 402 (-) AATCCAA S000127 RHERPATEXPA7 site 846 (+) KCACGW S000512 ROOTMOTIFTAPOX1 site 787 (+) ATATT S000098 ROOTMOTIFTAPOX1 site 902 (+) ATATT S000098 ROOTMOTIFTAPOX1 site 993 (+) ATATT S000098 ROOTMOTIFTAPOX1 site 1022 (+) ATATT S000098 ROOTMOTIFTAPOX1 site 1070 (+) ATATT S000098 ROOTMOTIFTAPOX1 site 1138 (+) ATATT S000098 ROOTMOTIFTAPOX1 site 1379 (+) ATATT S000098 ROOTMOTIFTAPOX1 site 127 (-) ATATT S000098 ROOTMOTIFTAPOX1 site 697 (-) ATATT S000098 ROOTMOTIFTAPOX1 site 786 (-) ATATT S000098 ROOTMOTIFTAPOX1 site 901 (-) ATATT S000098 ROOTMOTIFTAPOX1 site 1019 (-) ATATT S000098 ROOTMOTIFTAPOX1 site 1069 (-) ATATT S000098 ROOTMOTIFTAPOX1 site 1137 (-) ATATT S000098 ROOTMOTIFTAPOX1 site 1378 (-) ATATT S000098 S1FBOXSORPS1L21 site 1043 (-) ATGGTA S000223 SEF3MOTIFGM site 419 (+) AACCCA S000115 SEF3MOTIFGM site 536 (+) AACCCA S000115 SEF4MOTIFGM7S site 476 (+) RTTTTTR S000103 SEF4MOTIFGM7S site 943 (+) RTTTTTR S000103 SEF4MOTIFGM7S site 747 (-) RTTTTTR S000103 SEF4MOTIFGM7S site 782 (-) RTTTTTR S000103 SORLIP1AT site 1090 (+) GCCAC S000482 SORLIP1AT site 828 (-) GCCAC S000482 SURECOREATSULTR11 site 362 (-) GAGAC S000499 SV40COREENHAN site 8 (+) GTGGWWHG S000123 SV40COREENHAN site 219 (+) GTGGWWHG S000123 TAAAGSTKST1 site 464 (+) TAAAG S000387 TAAAGSTKST1 site 633 (+) TAAAG S000387 TAAAGSTKST1 site 867 (+) TAAAG S000387 TAAAGSTKST1 site 1372 (+) TAAAG S000387 TAAAGSTKST1 site 308 (-) TAAAG S000387 TAAAGSTKST1 site 937 (-) TAAAG S000387 TAAAGSTKST1 site 953 (-) TAAAG S000387 TATABOX3 site 137 (-) TATTAAT S000110 TATABOX3 site 628 (-) TATTAAT S000110 TATABOX3 site 1415 (-) TATTAAT S000110 TATABOX4 site 131 (+) TATATAA S000111 TATABOX5 site 185 (+) TTATTT S000203 TATABOX5 site 245 (+) TTATTT S000203 TATABOX5 site 429 (+) TTATTT S000203 TATABOX5 site 996 (+) TTATTT S000203 TATABOX5 site 1025 (+) TTATTT S000203 TATABOX5 site 1159 (+) TTATTT S000203 TATABOX5 site 1320 (+) TTATTT S000203 TATABOX5 site 1382 (+) TTATTT S000203 TATABOXOSPAL site 1026 (+) TATTTAA S000400 TATABOXOSPAL site 1034 (+) TATTTAA S000400 TBOXATGAPB site 770 (-) ACTTTG S000383 TBOXATGAPB site 1459 (-) ACTTTG S000383 TGACGTVMAMY site 1009 (+) TGACGT S000377 TGTCACACMCUCUMISIN site 1205 (-) TGTCACA S000422 WBOXATNPR1 site 1247 (+) TTGAC S000390 WBOXATNPR1 site 459 (-) TTGAC S000390 WBOXATNPR1 site 637 (-) TTGAC S000390 WBOXHVISO1 site 636 (-) TGACT S000442 WBOXNTERF3 site 636 (-) TGACY S000457 WBOXNTERF3 site 458 (-) TGACY S000457 WRKY71OS site 1009 (+) TGAC S000447 WRKY71OS site 1207 (+) TGAC S000447 WRKY71OS site 1248 (+) TGAC S000447 WRKY71OS site 1363 (+) TGAC S000447 WRKY71OS site 459 (-) TGAC S000447 WRKY71OS site 637 (-) TGAC S000447 XYLAT site 1193 (+) ACAAAGAA S000510 ------