Afalse Discovery Rate-Adjusted P-Value

Supplementary Table S1 Minor allele frequencies, and age- and centre-adjusted odds ratios for the associations between SNPs in vitamin D-related genes and breast cancer risk among South Asian and Mixed/Other subgroups

Gene / SNP / South Asian
(31 cases, 31 controls) / Mixed/Other
(60 cases, 45 controls)
Minor Allele Frequency (Controls) / OR (95% CI) / p-valuea / Minor Allele Frequency (Controls) / OR (95% CI) / p-valuea
GC / rs7041 / 0.42 / 1.34 (0.65, 2.77) / 0.79 / 0.51 / 0.80 (0.47, 1.36) / 0.68
VDR / rs757343 / 0.11 / 0.42 (0.09, 1.82) / 0.73 / 0.10 / 3.03 (1.34, 6.89) / 0.08
VDR / rs1544410 / 0.45 / 1.24 (0.62, 2.48) / 0.79 / 0.31 / 0.78 (0.44, 1.41) / 0.68
VDR / rs7967152 / 0.44 / 0.94 (0.46, 1.90) / 0.83 / 0.57 / 0.67 (0.38, 1.19) / 0.68
VDR / rs2239182 / 0.45 / 1.18 (0.60, 2.32) / 0.79 / 0.57 / 1.06 (0.60, 1.89) / 0.97
VDR / rs2107301 / 0.32 / 1.42 (0.69, 2.91) / 0.79 / 0.34 / 1.45 (0.80, 2.63) / 0.68
VDR / rs12717991 / 0.35 / 1.12 (0.54, 2.34) / 0.83 / 0.40 / 1.72 (0.95, 3.12) / 0.52
VDR / rs12721370 / 0.08 / 2.89 (0.89, 9.36) / 0.54 / 0.09 / 3.66 (1.51, 8.87) / 0.08
VDR / rs886441 / 0.21 / 0.90 (0.36, 2.27) / 0.83 / 0.23 / 0.66 (0.32, 1.36) / 0.68
VDR / rs3819545 / 0.32 / 1.23 (0.58, 2.60) / 0.79 / 0.46 / 1.31 (0.72, 2.39) / 0.68
VDR / rs2239186 / 0.23 / 0.49 (0.19, 1.29) / 0.60 / 0.29 / 0.66 (0.32, 1.33) / 0.68
VDR / rs10875693 / 0.26 / 0.45 (0.18, 1.18) / 0.55 / 0.17 / 1.06 (0.54, 2.07) / 0.97
VDR / rs11168275 / 0.42 / 0.87 (0.40, 1.91) / 0.83 / 0.44 / 0.78 (0.43, 1.41) / 0.68
VDR / rs2254210 / 0.24 / 0.19 (0.05, 0.66) / 0.19 / 0.30 / 1.03 (0.53, 2.03) / 0.97
VDR / rs2238136 / 0.24 / 0.71 (0.26, 1.89) / 0.79 / 0.18 / 1.19 (0.61, 2.30) / 0.92
VDR / rs2853564 / 0.31 / 0.34 (0.13, 0.91) / 0.33 / 0.30 / 1.09 (0.59, 2.04) / 0.97
VDR / rs11168287 / 0.48 / 0.83 (0.39, 1.76) / 0.79 / 0.53 / 0.77 (0.44, 1.35) / 0.68
VDR / rs4328262 / 0.39 / 1.24 (0.56, 2.73) / 0.79 / 0.45 / 0.66 (0.36, 1.20) / 0.68
VDR / rs7302235 / 0.29 / 1.25 (0.53, 2.95) / 0.79 / 0.28 / 0.94 (0.49, 1.78) / 0.97
VDR / rs11168292 / 0.26 / 0.53 (0.21, 1.32) / 0.60 / 0.26 / 1.01 (0.56, 1.81) / 0.98
VDR / rs11568820 / 0.32 / 1.33 (0.57, 3.08) / 0.79 / 0.24 / 1.05 (0.55, 1.99) / 0.97

aFalse discovery rate-adjusted p-value