Person al information
First name / Surname / Guillaume Sallé
Address(es) / INRA Val de Loire – Site 213 37380 NOUZILLY
Telephone / +33 02 47 42 75 67
Mobile / +33 06 37 08 70 69
E-mail /
Nationality / French
Date of birth / 4 September 1984
Gender / Male
Education and training / Specify information regarding PhD and MSc
Location and dates / TOULOUSE, 2014
Title of qualification awarded / None
Principal subjects/occupational skills covered / De novo RNAseq data assembly
Initiation to sequences alignment and phylogeny
Name of Institute / INRA GenoToul
Location and dates / TOULOUSE, 2009 – 2012
Title of qualification awarded / PhD (under the direction of P. Jacquiet and C. Moreno)
Principal subjects/occupational skills covered / Detection and functional investigation of genomic regions affecting resistance to parasitic nematodes in sheep
QTL detection analyses with SNP markers (Linkage analysis, GWAS)
Marker-assisted selection
Gene expression study (qPCR)
Parasitology
Name of Institute / Institut National Polytechnique de Toulouse
Location and dates / LIEGE (BELGIUM), 2009
Title of qualification awarded / Summer Institute in Statistical Genetics
Principal subjects/occupational skills covered / QTL detection methods
Micro-array data analysis
Name of Institute / Liège university
Location and dates / TOULOUSE, 2009
Title of qualification awarded / Msc training
Principal subjects/occupational skills covered / QTL detection for resistance to S. abortusovis in sheep
- 6-month training
- under the direction of C. Moreno
- Linkage analysis (microsatellite markers)
Name of Institute / INRA
Location and dates / PARIS, 2008-2009
Title of qualification awarded / Msc in Animal Genetics and Breeding
Principal subjects/occupational skills covered / Quantitative genetics, Population genetics, Genome structure
Name of Institute / Agroparistech
Location and dates / EDINBURGH (UK)
2007
Title of qualification awarded / DVM Training
Principal subjects/occupational skills covered / Genetic parameter estimation for resistance to parasitic nematodes in sheep
- under the direction of S. Bishop
- 3-month training
- EU Leonardo funded project
Name of Institute / The Roslin Institute
Location and dates / TOULOUSE, 2004-2009 (MUNICH, 2007-2008)
Title of qualification awarded / Doctor in Veterinary Medicine
Principal subjects/occupational skills covered / Veterinary sciences
Name of Institute / Ecole Nationale Vétérinaire de Toulouse
(Ludwig-Maximilians Universität München, 2007-2008)
Work experience
Location and dates / Nouzilly FRANCE2012 – to date
Occupation or position held / Research Engineer
Main activities and responsibilities / Mining nematode genomes for novel therapeutic options
- genetic structure of H. contortus populations
- looking for levamisole associated resistance genes
Research on integrated management of gastro-intestinal nematodes in sheep and horses
- Dissecting the anthelmintic potential of nicotinic-derivative containing plants
- Development of innovative biomarkers of nematode infection
- Mining the sheep genome for resistance genes to nematodes
Management of a parasitic nematode biological databank
Name of employer / INRA Animal Health division
Location and dates / Toulouse, FRANCE
2009 – 2012
Occupation or position held / PhD candidate
Main activities and responsibilities / Detection and functional investigation of genomic regions affecting resistance to parasitic nematodes in sheep
QTL detection analyses with SNP markers (Linkage analysis, GWAS)
Marker-assisted selection
Gene expression study (qPCR)
Parasitology
Name of employer / INRA / Ecole Nationale Vétérinaire de Toulouse
Languages
Mother tongue(s) / FRENCH
Other language(s) / Understanding / Speaking / Writing
European level (*) / Listening / Reading / Spoken interaction / Spoken production
ENGLISH / C1 / C1 / C1 / C1 / C1
GERMAN / B2 / B1 / B2 / B1 / B1
Add more languages if relevant / (*) Common European Framework of Reference for Languages http://europass.cedefop.europa.eu/en/resources/european-language-levels-cefr
Academic Record / Add as many lines as needed, delete fields which are not relevant to your profile
Publications
The list of your publications must be numbered, in chronological order with the most recent first.
Publication details must be according to standard systems of referencing e.g. Authors (x, y, z...), year, title, journal, issue n°/volume/page range).
Please specify all contributing authors, highlighting your name in bold and respecting the authors’ order.
Provide any other essential details that will help reviewers fully assess your contribution to the publication. / Accepted, in press and published articles / papers:
PAPERS
· Sallé G., Cortet J., Reigner F., Koch C., Cabaret J. Economical optimization os targeted-selective treatment in horses. Vet Parasitol. 2015. doi: 10.1016/j.vetpar.2015.09.006
· Sallé G., Cabaret J. A survey on parasite management by equine veterinarians highlights the need for a regulation change. Vet Rec Open. 2015 doi: 10.1136/vetreco-2014-000104
· S. Kornas*, G. Sallé*, M. Skalska, I. David, A. Ricard, J. Cabaret, 2015. Estimation of genetic parameters for the resistance to gastro-intestinal nematodes in thoroughbred Arabian horses. Int. J. Para. Mar;45(4):237-42. doi: 10.1016/j.ijpara.2014.11.003
· C.Chylinski, J. Cortet, G. Sallé, P. Jacquiet, J. Cabaret, 2014. Storage of gastrointestinal nematode infective larvae for species preservation and experimental infections, 2015. Parasitol. Res.114(2):715-20. doi: 10.1007/s00436-014-4238-5
· Hazard D, Moreno C, Foulquié D, Delval E, François D, Bouix J, Sallé G, Boissy A., 2014. Identification of QTLs for behavioral reactivity to social separation and humans in sheep using the OvineSNP50 BeadChip. BMC Genomics. 9;15:778. doi: 10.1186/1471-2164-15-778.
· Sallé G., Moreno C.R., Boitard, S., Ruesche, J., Tircazes-Sécula, A., Bouvier, F., Aletru, M., Weisbecker, J-L, Prévot, F., Bergeaud, J-P, Trumel, C., Grisez, C., Liénard, E., Jacquiet, P., 2014. Functional investigation of a QTL affecting resistance to Haemonchus contortus in sheep. Vet. Res., 17;45:68. doi: 10.1186/1297-9716-45-68.
· Assenza F, Elsen JM, Legarra A, Carré C, Sallé G, Robert-Granié C, Moreno CR., 2014. Genetic parameters for growth and faecal worm egg count following Haemonchus contortus experimental infestations using pedigree and molecular information. Genet Sel Evol. 14;46:13. doi: 10.1186/1297-9686-46-13.
· Riggio V, Pong-Wong R, Sallé G, Usai MG, Casu S, Moreno CR, Matika O, Bishop SC., 2014. A joint analysis to identify loci underlying variation in nematode resistance in three European sheep populations. J Anim Breed Genet. 8. doi: 10.1111/jbg.12071.
· Baloche G, Legarra A, Sallé G, Larroque H, Astruc JM, Robert-Granié C, Barillet F.,2014. Assessment of accuracy of genomic prediction for French Lacaune dairy sheep. J Dairy Sci ;97(2):1107-16. doi: 10.3168/jds.2013-7135
· G. Sallé, P. Jacquiet, L. Gruner, J. Cortet, C. Sauvé, F. Prévot, C. Grisez, J. P. Bergeaud, L. Schibler, A. Tircazes, D. Francois, C. Pery, F. Bouvier, J. C. Thouly, J. C. Brunel, A. Legarra, J. M. Elsen, J. Bouix, R. Ruppand C. R. Moreno. 2012. A genome scan for QTL affecting resistance to Haemonchus contortus in sheep. J Anim Sci., 90(13):4690-705. doi: 10.2527/jas.2012-5121
· I. Lantier, C.R. Moreno, P. Berthon, G. Sallé, F. Pitel, L. Schibler, A.V. Gautier-Bouchardon, R. Boivin, J.L. Weisbecker, D. François, J. Bouix, E.P. Cribiu, J.M.Elsen, F. Lantier. Quantitative trait loci for resistance to infection in sheep using a live Salmonella abortusovisvaccine. Animal genet. 2012 Oct;43(5):632-5. doi: 10.1111/j.1365-2052.2011.02291.x
CONGRESS ARTICLES
· Sallé G., Cabaret J. Meta-analysis of the cyathostomin communities’ structure. World Association for Advances in Veterinary Parasitology, Liverpool, 2015.
- Sallé G., Cabaret J. Economical optimization of targeted-selective treatment in horses. World Association for Advances in Veterinary Parasitology, Liverpool, 2015.
- C R Moreno, P Jacquiet, F Bouvier, J Cortet, A Blanchard-Letort, F Guégnard, D Francois, Y Bourdillon, C Grisez, F Prevot, A Averadère, J Demars, J Sarry, A Stella, F Woloszyn, K Canale-Tabet, J Cabaret, G Tosser-Klopp and G Sallé.Validation of QTL affecting resistance to nematodes in sheep identified in a back-cross design in a pure breed population. World Congress of Genetics Applied to Livestock Production, Vancouver, 2014
· Sallé G., Moreno C.R., Boitard, S., Ruesche, J., Tircazes-Sécula, A., Bouvier, F., Aletru, M., Weisbecker, J-L, Prévot, F., Bergeaud, J-P, Trumel, C., Grisez, C., Liénard, E., Jacquiet, P. Functional investigation of a QTL affecting resistance to Haemonchus contortus in sheep. 64th annual meeting of the European Association for Animal Production. Nantes 2013
· G.Sallé, P.Jacquiet, L. Gruner, J. Cortet, C. Sauvé, F. Prévot, F. Bouvier, D.François, C.Pery, J.Bouix, A.Legarra, R.Rupp and C.R.Moreno. Genomic Mapping of Resistance to Haemonchus contortusUsing the High-density OvineSNP50 Beachchip. 23th conference of theWorld Association for Advances in Veterinary Parasitology, Buenos Aires, 2011.
· G.Sallé, P.Jacquiet, L. Gruner, J. Cortet, C. Sauvé, F. Prévot, F. Bouvier, D.François, C.Pery, J.Bouix, A.Legarra, R.Rupp and C.R.Moreno. QTL detection for resistance to Haemonchuscontortus in sheep: preliminary study using the OvineSNP50 beadchip. World Congress of Genetics Applied to Livestock Production, Leipzig, 2010.
OTHER ARTICLES
Sallé G, Moreno C.R. Apports de la génomique en élevage de petits ruminants. Le nouveau praticien vétérinaire. Vol 4, n° 17. 2011
Submitted publications:
- Collas, CC., Sallé, G., Dumont, BB., Cortet, J., Martin-Rosset, W., Wimel, L., Fleurance, G. Sainfoin (Onobrychis viciifolia) or extra proteins in the diet as an alternative to control horse strongyle infection?, Plos One, in revision.
Participation in open calls for proposals as contributor or leader / - CORE Organic grant call 2014 (ECOGRASS project, contributor)
- Institut Carnot Santé Animale 2014 (GEMANEMA project, leader)
- Marie-Curie 2014 (QuantMolPara project, contributor)
- Institut Français du Cheval et de l’Equitation 2013 (VERMISEL project, leader)
- French Région Centre 2013 (LUPINEMA project, leader)
- Institut Carnot Santé Animale 2013 (PARASTRESS project, contributor)
- Appel à projets France génomique 2013 (PARCYGEN project, leader)
- ANIHWA grant call 2012 (happysheep&goat,contributor)
Graduate teaching as lecturer or training coordinator / Training coordinator of Msc students :
- M. Michaud (M1 student, Université de Tours): in vitro assay for anthelmintic resistance detection in cyasthotomins (2013)
- H. Février (M1 student, Université Rennes 1): in vitro study of lupine seed extracts on nematodes (2013)
- C. Evrard (Ecole Nationale Vétérinaire Maisons-Alfort): sociological approach of the anthelmintic use in French trotters breeders (2012)
Awards and prizes, if any / Léopold Escande prize for PhD work, Toulouse University (2013)
Collaboration and Networking
Participation in collaborative projects funded by competitive programmes (specify if at leading position) / Leader of:
· GEMANEMA project (Institut Carnot Santé Animale 2015-2018): validation of a set of SNPs for breeding nematode resistant sheep
· HCOMICS project (AgreenSkills postdoctoral project 2015-2016): exploration of H. contortus diversity (in partnership with the Sanger Institute)
· BIOREQUI project (Institut Français du Cheval et de l’Equitation, 2015-2017): Anthelmintic and antibiotic resistances in equids
· VERMISEL project (Institut Français du Cheval et de l’Equitation, 2014-2015): Targeted selective treatment in horses
Involved in:
· EQUIBOV project (French Horse Riding Institute, 2015-2018): impact of mixed grazing of horse and cattle on parasitism and production parameters
· SALAMIXproject (INRA metaprogram, 2015-2018): impact of mixed grazing of sheep and cattle on parasitism and production parameters
· STROMAEQ project (French Horse Riding Institute, 2015-2017): identification of biomarkers of infection by cyathostomins in equids
· FOETALIMproject (French Horse Riding Institute, 2014-2017): impact of foetal life on foal life trait
· BIOVIPARproject (French Région Centre, 2012-2015): sheep-nematode interaction
· EQUIPAR project (Institut Carnot Santé Animale & Institut Français du cheval et de l’équitation 2012-2015): Integrated management of parasitic nematodes in horses
Graduate teaching as lecturer or training coordinator; PhD supervision / Took part to C. Collas’ thesis committee (2013) in collaboration with G. Fleurance and B. Dumont (INRA UMRH, Clermont)
Training coordinator of Msc students :
- S. Marschesseau (M2 student, Université Rennes 1): behavioral assessment of parasitic infection in horses; in collaboration with M. Hausberger (CNRS, Université Rennes 1)
Membership of professional bodies and committees / Member of the Val de Loire ethics committee (from 2013 to date)
Guillaume SALLÉ [2]