The List of These 135 Pfam Family Ids and Names
The list of these 135 Pfam family IDs and names
Pfam ID / Pfam namePF00001 / 7 transmembrane receptor (rhodopsin family)
PF00002 / 7 transmembrane receptor (Secretin family)
PF00003 / 7 transmembrane receptor (metabotropic glutamate family)
PF00004 / ATPase family associated with various cellular activities (AAA)
PF00005 / ABC transporter
PF00008 / EGF-like domain
PF00010 / Helix-loop-helix DNA-binding domain
PF00017 / Src homology domain 2
PF00018 / SH3 domain
PF00020 / TNFR/NGFR cysteine-rich region
PF00023 / Ank repeat
PF00027 / Cyclic nucleotide-binding domain
PF00028 / Cadherin domain
PF00031 / Cystatin domain
PF00035 / Double-stranded RNA binding motif
PF00036 / EF hand
PF00038 / Intermediate filament protein
PF00041 / Fibronectin type III domain
PF00043 / Glutathione S-transferase; C-terminal domain
PF00046 / Homeobox domain
PF00047 / Immunoglobulin domain
PF00048 / Small cytokines (intecrine/chemokine), interleukin-8 like
PF00053 / Laminin EGF-like (Domains III and V)
PF00054 / Laminin G domain
PF00057 / Low-density lipoprotein receptor domain class A
PF00058 / Low-density lipoprotein receptor repeat class B
PF00059 / Lectin C-type domain
PF00061 / Lipocalin / cytosolic fatty-acid binding protein family
PF00063 / Myosin head (motor domain)
PF00065 / Neurotransmitter-gated ion-channel
PF00067 / Cytochrome P450
PF00069 / Protein kinase domain
PF00071 / Ras family
PF00076 / RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00079 / Serpin (serine protease inhibitor)
PF00084 / Sushi domain (SCR repeat)
PF00089 / Trypsin
PF00090 / Thrombospondin type 1 domain
PF00092 / von Willebrand factor type A domain
PF00093 / von Willebrand factor type C domain
PF00096 / Zinc finger; C2H2 type
PF00097 / Zinc finger; C3HC4 type (RING finger)
PF00098 / Zinc knuckle
PF00100 / Zona pellucida-like domain
PF00102 / Protein-tyrosine phosphatase
PF00104 / Ligand-binding domain of nuclear hormone receptor
PF00105 / Zinc finger, C4 type (two domains)
PF00106 / short chain dehydrogenase
PF00107 / Zinc-binding dehydrogenases
PF00122 / E1-E2 ATPase
PF00130 / Phorbol esters/diacylglycerol binding domain (C1 domain)
PF00135 / Carboxylesterase
PF00147 / Fibrinogen beta and gamma chains, C-terminal globular domain
PF00149 / Ser/Thr protein phosphatase
PF00153 / Mitochondrial carrier protein
PF00168 / C2 domain
PF00169 / PH domain
PF00170 / bZIP transcription factor
PF00171 / Aldehyde dehydrogenase family
PF00176 / SNF2 and others N-terminal domain
PF00178 / Ets-domain
PF00179 / Ubiquitin-conjugating enzyme
PF00225 / Kinesin motor domain
PF00233 / 3prime5prime-cyclic nucleotide phosphodiesterase
PF00249 / Myb-like DNA-binding domain
PF00250 / Fork head domain
PF00270 / DEAD/DEAH box helicase
PF00271 / Helicase conserved C-terminal domain
PF00307 / Calponin homology (CH) domain
PF00341 / Platelet-derived growth factor (PDGF)
PF00397 / WW domain
PF00400 / WD domain, G-beta repeat
PF00412 / LIM domain
PF00431 / CUB domain
PF00433 / Protein kinase C terminal domain
PF00435 / Spectrin repeat
PF00439 / Bromodomain
PF00442 / Ubiquitin carboxyl-terminal hydrolases family 2
PF00443 / Ubiquitin carboxyl-terminal hydrolase family 2
PF00498 / FHA domain
PF00503 / G-protein alpha subunit
PF00505 / HMG (high mobility group) box
PF00514 / Armadillo/beta-catenin-like repeat
PF00515 / TPR Domain
PF00520 / Ion transport protein
PF00531 / Death domain
PF00533 / BRCA1 C Terminus (BRCT) domain
PF00536 / SAM domain (Sterile alpha motif)
PF00560 / Leucine Rich Repeat
PF00571 / CBS domain
PF00595 / PDZ domain (Also known as DHR or GLGF).
PF00611 / Fes/CIP4 homology domain
PF00612 / IQ calmodulin-binding motif
PF00615 / Regulator of G protein signaling domain
PF00620 / RhoGAP domain
PF00621 / RhoGEF domain
PF00622 / SPRY domain
PF00627 / UBA domain
PF00628 / PHD-finger
PF00630 / Filamin/ABP280 repeat.
PF00632 / HECT-domain (ubiquitin-transferase).
PF00640 / Phosphotyrosine interaction domain (PTB/PID).
PF00642 / Zinc finger C-x8-C-x5-C-x3-H type (and similar).
PF00643 / B-box zinc finger.
PF00646 / F-box domain
PF00651 / BTB/POZ domain
PF00664 / ABC transporter transmembrane region.
PF00702 / haloacid dehalogenase-like hydrolase
PF00788 / Ras association (RalGDS/AF-6) domain
PF00822 / PMP-22/EMP/MP20/Claudin family
PF00856 / SET domain
PF00884 / Sulfatase
PF00969 / Class II histocompatibility antigen, beta domain
PF00989 / PAS domain
PF01007 / Inward rectifier potassium channel
PF01049 / Cadherin cytoplasmic region
PF01094 / Receptor family ligand binding region
PF01302 / CAP-Gly domain
PF01344 / Kelch motif
PF01352 / KRAB box
PF01391 / Collagen triple helix repeat (20 copies)
PF01392 / Fz domain
PF01403 / Sema domain
PF01410 / Fibrillar collagen C-terminal domain
PF01437 / Plexin repeat
PF01462 / Leucine rich repeat N-terminal domain
PF01463 / Leucine rich repeat C-terminal domain
PF01582 / TIR domain
PF01833 / IPT/TIG domain
PF02023 / SCAN domain
PF02214 / K+ channel tetramerisation domain
PF02373 / jmjC domain
PF02518 / Histidine kinase-, DNA gyrase B-, phytochrome-like ATPase
PF02793 / Hormone receptor domain
PF02798 / Glutathione S-transferase,B31 N-terminal domain