Supplemental File 1:
Text file of the alignment corresponding to Supplemental Figure 3.
A:Tree of histone H3 and variants
Sequences in FASTA format
>AT1G01370.1_HTR12_AtCENH3
------MARTKHRVTRSQPRNQTDAAGASSSQAAGPTT
TPTRRGGEGGDNTQQTNPTTSPATGTRRGAKRSRQAMPRGSQKKSYRYRPGTVALKEIRH
FQKQTNLLIPAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSMLCA
IHARRVTLMRKDFELARRLGGKGRPW
>GRMZM2G158526_ZmCENH3
------MARTKHQAVRKTAEKPKKKLQFERSGGASTSA
TPERAAGT------GGRAASGGDSVKKTKPRHRWRPGTVALREIRK
YQKSTEPLIPFAPFVRVVRELTNFVTNGKVERYTAEALLALQEAAEFHLIELFEMANLCA
IHAKRVTIMQKDIQLARRIGGRRWA-
>AT1G19890.1_HTR10_AtMGH3
------MARTKQTARKST------GGKG---
-PRKELAT------KAARKTRRPYRGGVKRAHRFRPGTVALREIRK
YQKSTDLLIRKLPFQRLVREIAQDFK--VDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMSKDIQLARRIRGERA--
>AT4G40030.2_HTR4_H3.3
MFFLLLSPRSDFTTIEFRVLSHSSLKIKMARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>AT5G10980.1_HTR8_H3.3
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>AT4G40040.1_HTR5_H3.3
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>GRMZM2G051879_P01_H3.3
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>GRMZM2G176358_P02_H3.3
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>GRMZM2G118355_P03_H3.3
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>GRMZM2G171387_P01_H3.3
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>GRMZM2G145758_P01_ZmAPH3
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APTTGGVKKPHRYRPGTVALREIRK
YQKSTDLLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>AT3G27360.1_HTR3_H3.1
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APATGGVKKPHRFRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>AT5G10400.1_HTR9_H3.1
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APATGGVKKPHRFRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>AT1G09200.1_HTR2_H3.1
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APATGGVKKPHRFRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>AT5G10390.1_HTR13_H3.1
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APATGGVKKPHRFRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>AT5G65360.1_HTR1_H3.1
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APATGGVKKPHRFRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRGERA--
>GRMZM2G078314_P01_H3.1
------MARTKQTARKST------GGKA---
-PRKQLAT------KAARKS-APATGGVKKPHRFRPGTVALREIRK
YQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVAALQEASEAYLVGLFEDTNLCA
IHAKRVTIMPKDIQLARRIRVERA--
Alignment in PHYLIP format
17 206
AT1G01370.1_HTR12_AtCENH3------MA RTKHRVTRSQ PRNQTDAAGA SSSQAAGPTT
GRMZM2G158526_ZmCENH3------MA RTKHQAVRKT AEKPKKKLQF ERSGGASTSA
AT1G19890.1_HTR10_AtMGH3 ------MA RTKQTARKST ------GGKG---
AT4G40030.2_HTR4_H3.3MFFLLLSPRS DFTTIEFRVL SHSSLKIKMA RTKQTARKST ------GGKA---
AT5G10980.1_HTR8_H3.3------MA RTKQTARKST ------GGKA---
AT4G40040.1_HTR5_H3.3------MA RTKQTARKST ------GGKA---
GRMZM2G051879_P01_H3.3 ------MA RTKQTARKST ------GGKA---
GRMZM2G176358_P02_H3.3 ------MA RTKQTARKST ------GGKA---
GRMZM2G118355_P03_H3.3 ------MA RTKQTARKST ------GGKA---
GRMZM2G171387_P01_H3.3 ------MA RTKQTARKST ------GGKA---
GRMZM2G145758_P01_ZmAPH3 ------MA RTKQTARKST ------GGKA---
AT3G27360.1_HTR3_H3.1------MA RTKQTARKST ------GGKA---
AT5G10400.1_HTR9_H3.1------MA RTKQTARKST ------GGKA---
AT1G09200.1_HTR2_H3.1------MA RTKQTARKST ------GGKA---
AT5G10390.1_HTR13_H3.1 ------MA RTKQTARKST ------GGKA---
AT5G65360.1_HTR1_H3.1------MA RTKQTARKST ------GGKA---
GRMZM2G078314_P01_H3.1 ------MA RTKQTARKST ------GGKA---
TPTRRGGEGG DNTQQTNPTT SPATGTRRGA KRSRQAMPRG SQKKSYRYRP GTVALKEIRH
TPERAAGT------GG RAASGGDSVK KTKPRHRWRP GTVALREIRK
-PRKELAT------KA ARKTRRPYRG GVKRAHRFRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APTTG GVKKPHRYRP GTVALREIRK
-PRKQLAT------KA ARKS-APATG GVKKPHRFRP GTVALREIRK
-PRKQLAT------KA ARKS-APATG GVKKPHRFRP GTVALREIRK
-PRKQLAT------KA ARKS-APATG GVKKPHRFRP GTVALREIRK
-PRKQLAT------KA ARKS-APATG GVKKPHRFRP GTVALREIRK
-PRKQLAT------KA ARKS-APATG GVKKPHRFRP GTVALREIRK
-PRKQLAT------KA ARKS-APATG GVKKPHRFRP GTVALREIRK
FQKQTNLLIP AASFIREVRS ITHMLAPPQI NRWTAEALVA LQEAAEDYLV GLFSDSMLCA
YQKSTEPLIP FAPFVRVVRE LTNFVTNGKV ERYTAEALLA LQEAAEFHLI ELFEMANLCA
YQKSTDLLIR KLPFQRLVRE IAQDFK--VD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTDLLIR KLPFQRLVRE IAQDFK--TD LRFQSHAVLA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSSAVAA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSSAVAA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSSAVAA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSSAVAA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSSAVAA LQEAAEAYLV GLFEDTNLCA
YQKSTELLIR KLPFQRLVRE IAQDFK--TD LRFQSSAVAA LQEASEAYLV GLFEDTNLCA
IHARRVTLMR KDFELARRLG GKGRPW
IHAKRVTIMQ KDIQLARRIG GRRWA-
IHAKRVTIMS KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR GERA--
IHAKRVTIMP KDIQLARRIR VERA--
B: Tree of histone H2A and variants
Sequences in FASTA format
>GRMZM2G151826_P01_H2A
-----MAGRGKA------IG-----AGAAKKATSRSSKAGLQFPVGRIARFLKAGKY-
AERVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSKASTVDDDDN--
------
>GRMZM2G041381_P01_H2A
-----MAGRGKA------IG-----AGAAKKATSRSSKAGLQFPVGRIARFLKAGKY-
AERVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAASSKASVDDDDN---
------
>GRMZM2G042047_P01_H2A
-----MAGRGKA------IG-----SGAAKKAMSRSSKAGLQFPVGRIARFLKAGKY-
AERVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKSGGGSAKAAAGDED--
------
>GRMZM2G151726_P03_H2A
-----MAGRGKA------IG-----SGAAKKATSRSSKAGLQFPVGRIARFLKAGKY-
AERVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGGSAKAAAGDED--
------
>AT3G20670.1_HTA13_H2A.13
-----MAGRGKT------LG-----SGVAKKSTSRSSKAGLQFPVGRIARFLKNGKY-
ATRVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKPSADED-----
------
>AT1G51060.1_HTA10_H2A.10
-----MAGRGKT------LG-----SGSAKKATTRSSKAGLQFPVGRIARFLKKGKY-
AERVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAEDD-----
------
>AT5G54640.1_HTA1_H2A.1
-----MAGRGKT------LG-----SGGAKKATSRSSKAGLQFPVGRIARFLKAGKY-
AERVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASKPQED------
------
>AT4G27230.1_HTA2_H2A.2
-----MAGRGKQ------LG-----SGAAKKSTSRSSKAGLQFPVGRIARFLKAGKY-
AERVGAGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED------
------
>GRMZM5G883764_P02_H2A.X
--MSSGGGRG------KPKGSKALSRSTKAGLQFPVGRIARYLKAGKY-
AERVGGGAPVYLSAVLEYLAAE------VLELAGNAARDNKK
NRIVPRHIQLAVRNDEELSKLLGAVTIAAGGVLPNIHQTLLPKKAGGKGKADIGSASQEF
------
>AT1G54690.1_HTA3_H2A.X.3
--MSSGAGSGTT------KGG-RG-KPKATKSVSRSSKAGLQFPVGRIARFLKAGKY-
AERVGAGAPVYLSAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG-KNKGDIGSASQEF
------
>AT1G08880.1_HTA5_H2A.X.5
--MSTGAGSGTT------KGG-RG-KPKATKSVSRSSKAGLQFPVGRIARFLKSGKY-
AERVGAGAPVYLSAVLEYLAAE------VLELAGNAARDNKK
TRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG-KNKGDIGSASQEF
------
>GRMZM2G107540_P01_H2A.X
--MSSTGGSG------RGKAKPATKSVSRSSKAGLQFPVGRIARYLKAGKY-
AERVGAGAPVYLSAVLEYLAAE------VLELAGNAARDNKK
NRIVPRHIQLAVRNDEELSKLLGTVTIAAGGVMPNIHQNLLPKKAG--HKGDIGSASQEF
------
>GRMZM2G046055_P01_H2A.X
--MSSTGGGG------RGKAKPATKSVSRSSKAGLQFPVGRIARYLKAGKY-
AERVGAGAPVYLSAVLEYLAAE------VLELAGNAARDNKK
NRIVPRHIQLAVRNDEELSKLLGTVTIAAGGVMPNIHQTLLPKKAG--QKGDIGSASQEF
------
>AT5G27670.1_HTA7_H2A.W.7
--MESSQATTKP-----TRGAGGR--KGGDRKKSVSKSVKAGLQFPVGRIARYLKKGRY-
ALRYGSGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
NRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTASSSQAEKA----S
ATKSPKKA
>AT5G02560.2_HTA12_H2A.W.12
-----MDSGTKV-----KKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRY-
SKRVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKK
NRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSK
ATKSPKKS
>AT5G59870.1_HTA6_H2A.W.6
-----MESTGKV-----KKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRY-
AQRLGGGAPVYMAAVLEYLAAE------VLELAGNAARDNKK
SRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEE-KA--TKS
PVKSPKKA
>GRMZM2G028955_P01_H2A.W
--MDVSGAGGKA-----KKGAAGR-KAGGPTKKSVSRSSRAGLQFPVSRVGRYLKKGRY-
AQRVGTGAPVYLAAVLEYLAAE------VLELAGNAARDNKK
TRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNIHTVLLPKKVAEKAA-----KEPKK
AAKSPKKA
>GRMZM2G003306_P01_H2A.W
MDASAAGAGGKA-----KKGAAGR-KAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRY-
AQRVGTGAPVYLAAVLEYLAAE------VLELAGNAAKDNKK
TRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTAEKAAAK-EAKSPKK
AAKSPKKA
>AT4G13570.2_HTA4_H2A.Z.4
--MIMVEGEMTTPY----PPI--VTLINGSRSLSPAITNYKCIRFQVARIHKQLKNRVSA
HSSVGATDVVYMTSILEYLTTE------VLQLAENTSKDLKV
KRITPRHLQLAIRGDEELDTLIKG-TIIGGSVIPHIH------
------
>AT1G52740.1_HTA9_H2A.Z.9
-----MSGKGAKGLIMGKPS---GSDKDKDKKKPITRSSRAGLQFPVGRVHRLLKTRSTA
HGRVGATAAVYTAAILEYLTAE------VLELAGNASKDLKV
KRISPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSAKE------
------
>GRMZM2G149775_P01_H2A.Z
-----MAGKGGKGLLAAKTTAAKSAEKDKGKKAPISRSSRAGLQFPVGRIHRQLKQRTQA
NGRVGATAAVYSAAILEYLTAE------VLELAGNASKDLKV
KRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE------
------
>GRMZM2G050833_P01_H2A.Z
-----MAGKGGKGLLAAKTTAAKSAEKDKGKKAPISRSSRAGLQFPVGRIHRQLKQRTQA
NGRVGATAAVYSAAILEYLTAE------VLELAGNASKDLKV
KRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE------
------
>AT3G54560.1_HTA11_H2A.Z.11
-----MAGKGGKGLVAAKTMAA-NKDKDKDKKKPISRSARAGIQFPVGRIHRQLKTRVSA
HGRVGATAAVYTASILEYLTAE------VLELAGNASKDLKV
KRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKE------
------
>AT2G38810.1_HTA8_H2A.Z.8
-----MAGKGGKGLLAAKTTAA-AANKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSA
HGRVGATAAVYTASILEYLTAE------VLELAGNASKDLKV
KRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVTKD------
------
Alignment in PHYLIP format
24 188
GRMZM2G151826_P01_H2A -----MAGRG KA------IG-----AGA AKKATSRSSK AGLQFPVGRI ARFLKAGKY-
GRMZM2G041381_P01_H2A -----MAGRG KA------IG-----AGA AKKATSRSSK AGLQFPVGRI ARFLKAGKY-
GRMZM2G042047_P01_H2A -----MAGRG KA------IG-----SGA AKKAMSRSSK AGLQFPVGRI ARFLKAGKY-
GRMZM2G151726_P03_H2A -----MAGRG KA------IG-----SGA AKKATSRSSK AGLQFPVGRI ARFLKAGKY-
AT3G20670.1_HTA13_H2A.13-----MAGRG KT------LG-----SGV AKKSTSRSSK AGLQFPVGRI ARFLKNGKY-
AT1G51060.1_HTA10_H2A.10-----MAGRG KT------LG-----SGS AKKATTRSSK AGLQFPVGRI ARFLKKGKY-
AT5G54640.1_HTA1_H2A.1-----MAGRG KT------LG-----SGG AKKATSRSSK AGLQFPVGRI ARFLKAGKY-
AT4G27230.1_HTA2_H2A.2-----MAGRG KQ------LG-----SGA AKKSTSRSSK AGLQFPVGRI ARFLKAGKY-
GRMZM5G883764_P02_H2A.X --MSSGGGRG ------KPK GSKALSRSTK AGLQFPVGRI ARYLKAGKY-
AT1G54690.1_HTA3_H2A.X.3--MSSGAGSG TT------KGG-RG-KPK ATKSVSRSSK AGLQFPVGRI ARFLKAGKY-
AT1G08880.1_HTA5_H2A.X.5--MSTGAGSG TT------KGG-RG-KPK ATKSVSRSSK AGLQFPVGRI ARFLKSGKY-
GRMZM2G107540_P01_H2A.X --MSSTGGSG ------RGKAKP ATKSVSRSSK AGLQFPVGRI ARYLKAGKY-
GRMZM2G046055_P01_H2A.X --MSSTGGGG ------RGKAKP ATKSVSRSSK AGLQFPVGRI ARYLKAGKY-
AT5G27670.1_HTA7_H2A.W.7--MESSQATT KP-----TRG AGGR--KGGD RKKSVSKSVK AGLQFPVGRI ARYLKKGRY-
AT5G02560.2_HTA12_H2A.W.12-----MDSGT KV-----KKG AAGRRSGGGP KKKPVSRSVK SGLQFPVGRI GRYLKKGRY-
AT5G59870.1_HTA6_H2A.W.6-----MESTG KV-----KKA FGGRKPPGAP KTKSVSKSMK AGLQFPVGRI TRFLKKGRY-
GRMZM2G028955_P01_H2A.W --MDVSGAGG KA-----KKG AAGR-KAGGP TKKSVSRSSR AGLQFPVSRV GRYLKKGRY-
GRMZM2G003306_P01_H2A.W MDASAAGAGG KA-----KKG AAGR-KAGGP RKKSVTRSVK AGLQFPVGRI GRYLKKGRY-
AT4G13570.2_HTA4_H2A.Z.4--MIMVEGEM TTPY----PP I--VTLINGS RSLSPAITNY KCIRFQVARI HKQLKNRVSA
AT1G52740.1_HTA9_H2A.Z.9-----MSGKG AKGLIMGKPS ---GSDKDKD KKKPITRSSR AGLQFPVGRV HRLLKTRSTA
GRMZM2G149775_P01_H2A.Z -----MAGKG GKGLLAAKTT AAKSAEKDKG KKAPISRSSR AGLQFPVGRI HRQLKQRTQA
GRMZM2G050833_P01_H2A.Z -----MAGKG GKGLLAAKTT AAKSAEKDKG KKAPISRSSR AGLQFPVGRI HRQLKQRTQA
AT3G54560.1_HTA11_H2A.Z.11-----MAGKG GKGLVAAKTM AA-NKDKDKD KKKPISRSAR AGIQFPVGRI HRQLKTRVSA
AT2G38810.1_HTA8_H2A.Z.8-----MAGKG GKGLLAAKTT AA-AANKDSV KKKSISRSSR AGIQFPVGRI HRQLKQRVSA
AERVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
ATRVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AERVGGGAPV YLSAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLSAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLSAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLSAVLEYLA AE------VLEL AGNAARDNKK
AERVGAGAPV YLSAVLEYLA AE------VLEL AGNAARDNKK
ALRYGSGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
SKRVGTGAPV YLAAVLEYLA AENSCGFCSV ASLTIYRCRM SSSDFRVLEL AGNAARDNKK
AQRLGGGAPV YMAAVLEYLA AE------VLEL AGNAARDNKK
AQRVGTGAPV YLAAVLEYLA AE------VLEL AGNAARDNKK
AQRVGTGAPV YLAAVLEYLA AE------VLEL AGNAAKDNKK
HSSVGATDVV YMTSILEYLT TE------VLQL AENTSKDLKV
HGRVGATAAV YTAAILEYLT AE------VLEL AGNASKDLKV
NGRVGATAAV YSAAILEYLT AE------VLEL AGNASKDLKV
NGRVGATAAV YSAAILEYLT AE------VLEL AGNASKDLKV
HGRVGATAAV YTASILEYLT AE------VLEL AGNASKDLKV
HGRVGATAAV YTASILEYLT AE------VLEL AGNASKDLKV
TRIVPRHIQL AVRNDEELTK LLGGATIASG GVMPNIHQHL LPKKAGSSKA STVDDDDN--
TRIVPRHIQL AVRNDEELTK LLGGATIASG GVMPNIHQHL LPKKAASSKA SVDDDDN---
TRIVPRHIQL AVRNDEELSR LLGTVTIASG GVMPNIHNLL LPKKSGGGSA KAAAGDED--
TRIVPRHIQL AVRNDEELSR LLGTVTIASG GVMPNIHNLL LPKKAGGGSA KAAAGDED--
TRIVPRHIQL AVRNDEELSK LLGDVTIANG GVMPNIHSLL LPKKAGASKP SADED-----
TRIVPRHIQL AVRNDEELSK LLGDVTIANG GVMPNIHNLL LPKKTGASKP SAEDD-----
TRIVPRHIQL AVRNDEELSK LLGDVTIANG GVMPNIHNLL LPKKAGASKP QED------
TRIVPRHIQL AVRNDEELSK LLGDVTIANG GVMPNIHNLL LPKKAGSSKP TEED------
NRIVPRHIQL AVRNDEELSK LLGAVTIAAG GVLPNIHQTL LPKKAGGKGK ADIGSASQEF
TRIVPRHIQL AVRNDEELSK LLGSVTIANG GVLPNIHQTL LPSKVG-KNK GDIGSASQEF
TRIVPRHIQL AVRNDEELSK LLGSVTIANG GVLPNIHQTL LPSKVG-KNK GDIGSASQEF
NRIVPRHIQL AVRNDEELSK LLGTVTIAAG GVMPNIHQNL LPKKAG--HK GDIGSASQEF
NRIVPRHIQL AVRNDEELSK LLGTVTIAAG GVMPNIHQTL LPKKAG--QK GDIGSASQEF
NRINPRHLCL AIRNDEELGR LLHGVTIASG GVLPNINPVL LPKKSTASSS QAEKA----S
NRIIPRHVLL AVRNDEELGT LLKGVTIAHG GVLPNINPIL LPKKSEKAAS TTKTPKSPSK
SRIIPRHLLL AIRNDEELGK LLSGVTIAHG GVLPNINSVL LPKKSATKPA EE-KA--TKS
TRIIPRHVLL AIRNDEELGK LLAGVTIAHG GVLPNIHTVL LPKKVAEKAA -----KEPKK
TRIIPRHVLL AIRNDEELGK LLSGVTIAHG GVLPNINPVL LPKKTAEKAA AK-EAKSPKK
KRITPRHLQL AIRGDEELDT LIKG-TIIGG SVIPHIH------
KRISPRHLQL AIRGDEELDT LIKG-TIAGG GVIPHIHKSL INKSAKE------
KRITPRHLQL AIRGDEELDT LIKG-TIAGG GVIPHIHKSL INKSSKE------
KRITPRHLQL AIRGDEELDT LIKG-TIAGG GVIPHIHKSL INKSSKE------
KRITPRHLQL AIRGDEELDT LIKG-TIAGG GVIPHIHKSL INKTTKE------
KRITPRHLQL AIRGDEELDT LIKG-TIAGG GVIPHIHKSL VNKVTKD------
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ATKSPKKA
ATKSPKKS
PVKSPKKA
AAKSPKKA
AAKSPKKA
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