Table S3: Macroarray data of 107 transcripts identified in C306 and HI544

Gene ID. / C306 / ±SD value / HI1544 / ±SD value / Methods Used / Other reports / Gene ID. / C306 / ±SD value / HI1544 / ±SD value / Methods Used / Other reports
JK546454 / 1.546 / 0.27 / -1.592 / 0.37 / SSH / Lata et al. 2010 / JK546508 / 4.02 / 0.58 / 1.385 / 0.6 / cDNA library / Talame et al. 2007
JK546455* / 5.656 / 0.36 / 1.624 / 0.52 / JK546509 / 7.11 / 0.77 / 1.209 / 0.5 / cDNA library / Houde et al. 2006
JK546456 / 5.506 / 0.77 / -1.203 / 0.58 / Super SAGE / Molina et al. 2008 / JK546510 / 5.08 / 0.11 / 1.435 / 0.5 / cDNA-AFLP / Yang et al. 2003
JK546457 / 5.254 / 0.83 / -14.9 / 0.53 / cDNA library / Isrigler et al. 2007 / JK546511* / 4.95 / 0.99 / 2.197 / 0.7 / SSH / Houde et al. 2006
JK546458 / 3.206 / 0.10 / -1.363 / 0.39 / JK546512* / 2.16 / 0.98 / -0.689 / 0.5 / SSH / Zheng et al. 2004
JK546459 / 3.748 / 0.53 / -2.467 / 0.31 / JK546513 / 3.95 / 0.43 / 2.206 / 0.7 / SSH / Reddy et al. 2008
JK546460 / 1.553 / 0.65 / -1.95 / 0.38 / cDNA library / Gorantla et al. 2007 / JK546514 / 2.51 / 0.72 / 3.391 / 0.8 / Super SAGE / Molina et al. 2008
JK546461 / 3.348 / 0.33 / -1.613 / 0.44 / cDNA library / Gorantla et al. 2007 / JK546515 / 1.11 / 0.64 / 1.283 / 0.5 / cDNA microarray / Molina et al. 2008
JK546462 / 1.661 / 0.72 / -1.585 / 0.43 / JK546516 / 1.51 / 0.41 / -1.178 / 0.4
JK546463* / 3.292 / 0.42 / 1.021 / 0.59 / JK546517 / 2.23 / 0.36 / 1.09 / 0.5 / cDNA library / Rodrigues et al. 2008
JK546464 / 1.535 / 0.59 / -1.226 / 0.44 / cDNA library / Gorantla et al. 2007 / JK546518 / 2.26 / 0.53 / 1.401 / 0.7
JK546465 / 4.556 / 0.28 / 1.015 / 0.47 / cDNA library / Gao et al. 2008 / JK546519 / 3.05 / 0.54 / 1.589 / 0.6
JK546466 / 1.686 / 0.88 / -1.476 / 0.29 / JK546520 / 6.74 / 0.61 / 1.681 / 0.7
JK546467* / 4.405 / 0.39 / -1.265 / 0.43 / cDNA library / Mantri et al. 2007 / JK546521 / 1.79 / 0.19 / 1.392 / 0.5 / cDNA library / Oztruck et al. 2002
JK546468 / 3.577 / 0.80 / -2.884 / 0.34 / cDNA library / Gorantla et al. 2007 / JK546522 / 2.54 / 0.47 / 1.072 / 0.4 / SSH / Huang et al. 2002
JK546469 / 4.222 / 0.60 / -2.789 / 0.34 / cDNA library / Houde et al. 2006 / JK546523 / 5.8 / 0.63 / 4.477 / 0.1
JK546470 / 2.489 / 0.67 / -5.171 / 0.29 / cDNA library / Houde et al. 2006 / JK546524 / 1.58 / 0.11 / 1.26 / 0.5 / cDNA microarray / Mantri et al. 2007
JK546471 / 3.67 / 0.41 / -0.622 / 0.69 / SSH library / Way et al. 2005 / JK546525 / 2.47 / 0.44 / 1.686 / 0.7
JK546472 / 3.438 / 0.72 / -1.421 / 0.45 / cDNA library / Rodrigues et al. 2008 / JK546526 / 1.59 / 0.24 / -1.139 / 0.3 / cDNA microarray / Seki et al. 2002
JK546473 / 2.392 / 0.67 / -1.52 / 0.47 / JK546527 / 1.23 / 0.39 / -1.428 / 0.3 / cDNA microarray / Michelletto et al. 2007
JK546474 / 1.65 / 0.57 / -1.39 / 0.49 / cDNA library / Houde et al. 2006 / JK546528* / 3.09 / 0.45 / -1.119 / 0.5 / cDNA library / Talame et al. 2007
JK546475* / 2.835 / 0.46 / 1.07 / 0.12 / JK546529 / 1.66 / 0.68 / -2.177 / 0.4 / SSH / Lata et al. 2010
JK546476 / 1.495 / 0.69 / 1.07 / 0.69 / cDNA library / Gorantla et al. 2007 / JK546530* / 6.66 / 0.49 / 1.006 / 0.5 / SSH / Jain et al. 2010
JK546477 / 3.432 / 0.44 / 1.831 / 0.63 / cDNA library / Abe et al. 2011 / JK546531 / 4.97 / 0.14 / -1.059 / 0.5
JK546478 / 0.593 / 0.62 / -1.186 / 0.33 / JK546532 / 2.03 / 0.11 / 1.767 / 0.7
JK546479 / 6.282 / 0.33 / 1.436 / 0.54 / JK546533 / 4.07 / 0.43 / 4.128 / 0.2
JK546480 / 3.997 / 0.10 / 1.03 / 0.53 / JK546534 / 2.95 / 0.86 / 1.177 / 0.4 / SSH / Lata et al. 2010
JK546481 / 4.362 / 0.68 / -1.261 / 0.46 / SSH library / Zheng et al. 2004 / JK546535 / 4.25 / 0.69 / 1.344 / 0.5
JK546482* / 3.387 / 0.61 / 1.166 / 0.56 / JK546536 / 6.5 / 0.87 / -1.025 / 0.5 / Microarray / Cushman et al. 2008
JK546483 / 6.729 / 0.67 / 1.211 / 0.54 / JK546537 / 2.24 / 0.12 / -13.91 / 0.3 / SSH / Li et al. 2012
JK546484 / 5.991 / 0.13 / 1.215 / 0.59 / SSH library / Way et al. 2005 / JK546538 / 2.32 / 0.40 / -1.081 / 0.5 / cDNA library / Gorantla et al. 2007
JK546485 / 4.163 / 0.12 / 1.259 / 0.67 / cDNA library / Cushman et al. 2008 / JK546539 / 2.62 / 0.45 / 1.516 / 0.7 / cDNA library / Gorantla et al. 2007
JK546486 / 5.427 / 0.79 / -0.97 / 0.54 / cDNA library / Talame et al. 2007 / JK546540 / 1.14 / 0.52 / -7.787 / 0.2
JK546487 / 4.918 / 0.10 / 2.262 / 0.91 / cDNA library / Molina et al. 2008 / JK546541 / 2.83 / 0.33 / 1.025 / 0.5 / SSH / Lata et al. 2010
JK546488 / 5.567 / 0.95 / 1.765 / 0.8 / cDNA SSH / Boominathan et al. 2004 / JK546542* / 2.55 / 0.53 / -3.026 / 0.3
JK546489 / 4.433 / 0.99 / 2.368 / 0.84 / JK546543 / 2.36 / 0.51 / 1.023 / 0.5
JK546490 / 4.3 / 0.71 / 1.311 / 0.5 / SSH / Li et al. 2012 / JK546544 / 2.87 / 0.42 / -6.884 / 0.3 / cDNA library / Gorantla et al. 2007
JK546491* / 2.448 / 0.75 / -1.522 / 0.37 / JK546545 / 2.16 / 0.46 / -2.335 / 0.2 / cDNA library / Gorantla et al. 2007
JK546492 / 5.559 / 0.49 / 1.069 / 0.51 / cDNA library / Milla et al. 2002 / JK546546 / 4.97 / 0.44 / 1.951 / 0.7
JK546493 / 3.516 / 0.68 / -1.104 / 0.56 / cDNA AFLP / Rodriguez et al. 2006 / JK546547 / 1.41 / 0.90 / 1.433 / 0.5 / cDNA library / Stolf-Moreira et al. 2011
JK546494 / 5.037 / 0.60 / -0.581 / 0.76 / cDNA library / Houde et al. 2006 / JK546548 / 5.15 / 0.38 / -1.13 / 0.5
JK546495 / 5.083 / 0.90 / 1.867 / 0.86 / cDNA library / Gorantla et al. 2007 / JK546549 / 4.75 / 0.54 / 3.135 / 0.1 / cDNA AFLP / Yang et al. 2003
JK546496* / 1.431 / 0.93 / -1.459 / 0.38 / SSH / Houde et al. 2006 / JK546550 / 2.5 / 0.55 / -1.177 / 0.4
JK546497 / 2.328 / 0.36 / 2.528 / 0.1 / SSH / Zheng et al. 2004 / JK546551 / 3.16 / 0.14 / 1.084 / 0.4
JK546498 / 5.059 / 0.44 / 1.92 / 0.8 / JK546552 / 3.71 / 0.57 / 1.802 / 0.6 / Macroarray / Rodrigues et al. 2008
JK546499 / 3.543 / 0.93 / 1.543 / 0.6 / cDNA library / Talame et al. 2007 / JK546553 / 2.28 / 0.53 / 1.484 / 0.5
JK546500 / 2.722 / 0.69 / 1.878 / 0.77 / cDNA library / Gorantla et al. 2007 / JK546554 / 3.75 / 0.11 / 2.217 / 0.7
JK546501 / 3.741 / 0.54 / -1.119 / 0.43 / JK546555 / 3.65 / 0.69 / -1.063 / 0.2
JK546502 / 2.855 / 0.63 / 2.132 / 0.71 / cDNA library / Rodrigues et al. 2008 / JK546556 / 2.68 / 0.64 / 1.785 / 0.5 / SSH / Jain et al. 2010
JK546503 / 3.634 / 0.69 / 1.851 / 0.73 / JK546557 / 4.26 / 0.40 / 1.36 / 0.4
JK546504 / 5.842 / 0.90 / 1.643 / 0.58 / cDNA library / Gorantla et al. 2007 / JK546558 / 4.26 / 0.72 / 1.861 / 0.5
JK546505* / 3.658 / 0.11 / 1.529 / 0.72 / JK546559 / 5.21 / 0.59 / 1.511 / 0.5
JK546506* / 5.329 / 0.60 / 1.16 / 0.54 / cDNA library / Gorantla et al. 2007 / JK546560 / 5.16 / 0.56 / 1.245 / 0.4
JK546507 / 2.906 / 0.94 / 1.161 / 0.5

* = Selected for qRT-PCR analysis; n= no hit; ±SD value = Standard Deviation

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