Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
Illmn IDa / Nameb / oligo1 / oligo2 / oligo3 / IllumiCode Namec / Illumicode Seqd / Illmn Strande / SNPf / TopGenomicSeqg / Customer Strandhapyrase_SNP1-0_T_R_2027881511 / apyrase_SNP1 / ACTTCGTCAGTAACGGACATCGTCGGGGACGACATCTTCTC / GAGTCGAGGTCATATCGTATCGTCGGGGACGACATCTTCTG / TTGCTCTAAAAGTGGAATGAGAGTACCGGGCATTACTCACTCCAGTCTGCCTATAGTGAGTC / 2361 / GTACCGGGCATTACTCACTCCA / TOP / [C/G] / TTTGGAATAACAAGTCTRACGGGTGTSWTGGGTTGAAGATCGTCGGGGACGACATCTTCT[C/G]CTTGCTCTAAAAGTGGAATGAGAGATTTTGCAGCCTGTTCTGGATTATTAGCGTATGAAC / BOT
ARBA10426_104-0_B_F_2027881405 / ARBA10426_104 / ACTTCGTCAGTAACGGACAGGCTTCAAGGGCTTGAAATCTTT / GAGTCGAGGTCATATCGTAGGCTTCAAGGGCTTGAAATCTTC / ATTCTTGCAATGTTAAGCTCGTCATAACGATTCGTGTGACAGTTCGTCTGCCTATAGTGAGTC / 4974 / TCATAACGATTCGTGTGACAGTTC / BOT / [T/C] / CACCMGAAAGTTTGCTATCGGTCTCAACAACATCGACGATAACATTAGCAGTGCCTGGTAATTCTCGAGGTCCAGCTTCGAGCTTAACATTGCAAGAATC[G/A]AAGATTTCAAGCCCTTGAAGCCTTGAAATAGCGATTTGCGAAGCTTGCATGAGTTCCTGCATTGTAGTGGCTTTCTCGATTYCATTGAGTTCGGCTTCGA / BOT
ARBA10426_200-0_B_F_2027881407 / ARBA10426_200 / ACTTCGTCAGTAACGGACTTGTTGAGACCGATAGCAAACTTTCT / GAGTCGAGGTCATATCGTTTGTTGAGACCGATAGCAAACTTTCG / GTGGATTTGGTGTTTATATGAAATTCAAAGGTAGACCCGACACGTTTGTCTGCCTATAGTGAGTC / 5221 / TTCAAAGGTAGACCCGACACGTTT / BOT / [T/G] / CACTAGATTTCTAAAGTAAGATTTCTCACAGAGTCAACACATTAYGAAAAAGAGAAAAATAAGARAGTACCGATGGTTTCATATAAACACCAAATCCACC[C/A]GAAAGTTTGCTATCGGTCTCAACAACATCGACGATAACATTAGCAGTGCCTGGTAATTCTCGAGGTCCAGCTTCGAGCTTAACATTGCAAGAATCRAAGA / BOT
ARBA10426_677-0_B_R_2027881410 / ARBA10426_677 / ACTTCGTCAGTAACGGACGTGAGAAAGCATGAACATTCGTGCT / GAGTCGAGGTCATATCGTGTGAGAAAGCATGAACATTCGTGCC / CAAGAGGAGTTAAAACCCCTTATTCTAAGGACTCAAATCGCGGTTGTCTGCCTATAGTGAGTC / 5933 / ATTCTAAGGACTCAAATCGCGGTT / BOT / [T/C] / ATATATGGGATGCTTCTTTAGCCTATGGTGGCAGCCAAGCGACAGAGGTGAGCTTAGGGGTGTATGCTCCTCGCCTCAAAGGGGTTTTAACTCCTCTTGT[A/G]GCACGAATGTTCATGCTTTCTCAAGATTGGCAGGAGTTTTCTTCGTATAAAGAGCAGTTGTTAGGCATGTCTCTTGACTTGATTTCAACAAAGCACCAGG / TOP
ARBA10806_623-0_T_F_2027881411 / ARBA10806_623 / ACTTCGTCAGTAACGGACGATGGGAATTGGGACAGGCTCTA / GAGTCGAGGTCATATCGTGATGGGAATTGGGACAGGCTCTC / CTAAGACGTTAGCTGCTGATGGACATGAGTGCATTGCTCCGCTGTCTGCCTATAGTGAGTC / 3014 / GACATGAGTGCATTGCTCCGCT / TOP / [A/C] / TCGTCTTTGTTTGTTGCTAGTACTTTTGTATATCATGCTGCATTTATGCTTCCCACTAACTGACTAGTATTTTATATTCATGGGAATTGGGACAGGCTCT[A/C]TCTAAGACGTTAGCTGCTGATGAGCTGAACTATTTGAAGGAGCAGTTTTCACTTTTAGAACCAAACAAAAATGGCACAATTAGCTTGGAAAATATCAAAG / TOP
ARBA17882_414-0_T_F_2027881413 / ARBA17882_414 / ACTTCGTCAGTAACGGACTGTCTATTGAACTGTATTCATTGATTGTAA / GAGTCGAGGTCATATCGTTGTCTATTGAACTGTATTCATTGATTGTAC / ATTTTCTATAGTAGAATCGAAGAAAACTGCTACTTGTGACGATGCGCGTCTGCCTATAGTGAGTC / 2152 / ACTGCTACTTGTGACGATGCGC / TOP / [A/C] / AAATTTCTGTCAAGTTTGATTGTGGTTTGAATCTTCGGTACCAGTTATTCATGATGCTATTATTCCCATAATGTCTATTGAACTGTATTCATTGATTGTA[A/C]TATTTTCTATAGTAGAATCGAAGAAATAACTTTAATTTCATGATTTTTTAGGGAATGTGCTATAGTTTACCTACGCTAGATGATCCATTCAATGATAGAC / TOP
ARBA17882_646-0_B_F_2027881415 / ARBA17882_646 / ACTTCGTCAGTAACGGACCGGTTGGTGGAAGTATTTCACAGAAAT / GAGTCGAGGTCATATCGTCGGTTGGTGGAAGTATTTCACAGAAAC / AAATAGACAAACAGGAAAAGATGTTTCGCACGAGGTGATATGCGTGGTCTGCCTATAGTGAGTC / 3896 / TTTCGCACGAGGTGATATGCGTG / BOT / [T/C] / TGATGTTGATCACAGCAAAGGTCACCAATCTGATCCATCTTAACATTTTCCTTCTCTAAGTGACTTTTATTGTTCGCATCTTTTCCTGTTTGTCTATTTG[G/A]TTTCTGTGAAATACTTCCACCAACCGTGCCTTTCCCGCTTGGTGCACTCTTCCCTTTAACATGATCTGTCTTTTCTTTTGGGGAAGTTGTTTTCGTTTCC / BOT
Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
(continued)
ARBA3199_340-0_T_F_2027881417 / ARBA3199_340 / ACTTCGTCAGTAACGGACAAGAGGCTGTTGCAACGACATTA / GAGTCGAGGTCATATCGTAAGAGGCTGTTGCAACGACATTG / GAAGGGGATTGAATTTCTATTCGGCAGAGGGTTCCCGTTACTCAGTCTGCCTATAGTGAGTC / 2081 / GGCAGAGGGTTCCCGTTACTCA / TOP / [A/G] / CAATGTAGTTTGCGAAAGAGAACCCTATGAACGAAGTTTTACCTAAAGTGAAAGTCAAAGATGTCGAGGATGTAACGGAAGAGGCTGTTGCAACGACATT[A/G]AGAAGGGGATTGAATTTCTATTCAAMTATCCAGAGTCATGATGGACACTGGCCAGGAGATTATGGAGGTCCCATGTTTCTTATGCCTGGATTGGTAATAT / TOP
ARBA3199_567-0_B_R_2027881420 / ARBA3199_567 / ACTTCGTCAGTAACGGACACTGCATTCAAAGCCCCGGTT / GAGTCGAGGTCATATCGTACTGCATTCAAAGCCCCGGTG / CAGACAGAGTAATAACCTGTTTAATCAATCGTCTATGCCGAGGTACGTCGTCTGCCTATAGTGAGTC / 3704 / AATCGTCTATGCCGAGGTACGTC / BOT / [T/G] / ATTGCCTTCAAAATTTGGGTGTTTTCATATAGTTTTTGTTTTCACTTTTCATTGATAATGACAAGARCTCTATGATTAAACAGGTTATTACTCTGTCTGT[A/C]ACCGGGGCTTTGAATGCAGTCTTAACAGACGAGCATAGAAAGGARATGCGTCGTTACCTTTATAATCATCAGGTAAGAGGTTCACTCTATCTCTCACACT / TOP
ARBA3199_612-0_B_R_2027881422 / ARBA3199_612 / ACTTCGTCAGTAACGGACGTGATGATTATAAAGGTAACGACGCATT / GAGTCGAGGTCATATCGTGTGATGATTATAAAGGTAACGACGCATC / CCTTTCTATGCTCGTCTGTTAAATCAGTCGTGCGATGTTCCAAGCGTCTGCCTATAGTGAGTC / 3906 / ATCAGTCGTGCGATGTTCCAAGC / BOT / [T/C] / TTTTCATTGATAATGACAAGARCTCTATGATTAAACAGGTTATTACTCTGTCTGTMACCGGGGCTTTGAATGCAGTCTTAACAGACGAGCATAGAAAGGA[A/G]ATGCGTCGTTACCTTTATAATCATCAGGTAAGAGGTTCACTCTATCTCTCACACTAATCTRCMGTTCTTCTAAYTAGTTAAATGTAATTGCAGAACAAGG / TOP
ARBA4694_128-0_B_F_2027881423 / ARBA4694_128 / ACTTCGTCAGTAACGGACGTGATAATGCTGGTGGGAATGACAT / GAGTCGAGGTCATATCGTGTGATAATGCTGGTGGGAATGACAC / GAATGTTGAAGTTGAGTGCAATAGTCGGTAGATCACGTTCAGCACGTCTGCCTATAGTGAGTC / 1333 / GTCGGTAGATCACGTTCAGCAC / BOT / [T/C] / GCTTGAAATCAAAGCCTTAGCAGCATGTTACTGAAACTATAATCCCAATCAGTTATTATTGCATAATGCCCATGAATATTGCACTCAACTTCAACATTCT[G/A]TGTCATTCCCACCAGCATTATCAATTCATCCTTATGCAATCAACAAACACGGTAAAACAGGGTAAAATagaAGAAGCGGACTAATCAAAATGGTYAGCCA / BOT
ARBA4694_869-0_T_R_2027881426 / ARBA4694_869 / ACTTCGTCAGTAACGGACCCAACTTATCACAAACAAACAACAAAGAAA / GAGTCGAGGTCATATCGTCCAACTTATCACAAACAAACAACAAAGAAT / GATTATTTGAGAATGTCTTTTGTTTCACGGGTAACTCACTCGGTGTGGTCTGCCTATAGTGAGTC / 1241 / CACGGGTAACTCACTCGGTGTG / TOP / [A/T] / AGAAAAGATACAGATATCATCAAACAAGTTAACCAATGAAATCAACTACACATAATCATCTaacAAGTATACCAACTTATCACAAACAAACAACAAAGAA[A/T]AGATTATTTGAGAATGTCTTTTGTTTAGCCTACCCGTTGAYKTACCAACAAATCTTCAAATCCTCAGTATAAACAACAATTAATTATTTATATGCAACTA / BOT
ARBA5046_271-0_B_R_2027881430 / ARBA5046_271 / ACTTCGTCAGTAACGGACGGAAGAGCACTCTACATAATCGATCAAT / GAGTCGAGGTCATATCGTGGAAGAGCACTCTACATAATCGATCAAC / AAAATTCAGTTGTAGATAATAGCAAAATGTTGACCCGGATCTCGTCCGTCTGCCTATAGTGAGTC / 515 / AATGTTGACCCGGATCTCGTCC / BOT / [T/C] / GCTTACTCGGCGATGATTTGTTTTTGAAAACTAGCATAGAGTGYAGAATTTAACTCAAATACATGTGATTACTTTTGCTATTATCTACAACTGAATTTTC[A/G]TTGATCGATTATGTAGAGTGCTCTTCCTCAGAGAGGCGGGGAAGTAAACCTGACTTTGGGCGGTATTGACCTAAACAACTCGGGGAGGTATGTTTGGTGA / TOP
Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
(continued)
ARBA5046_85-0_B_F_2027881427 / ARBA5046_85 / ACTTCGTCAGTAACGGACGTCCCACCATTCTTAAGATGTTTTCTTT / GAGTCGAGGTCATATCGTGTCCCACCATTCTTAAGATGTTTTCTTC / GTATTTTTTGTCTCTTATGTTGTTCGAAGGGTATCGCCTTGTATGTCGGTCTGCCTATAGTGAGTC / 3826 / GAAGGGTATCGCCTTGTATGTCG / BOT / [T/C] / CATCGCCGAGTAAGCTTAACCAATCACTTATCATTGTATGYTTTTCTTGTTTAATTAGAGAGTYGCAACATACAGAACAACATAAGAGACAAAAAATACC[G/A]AAGAAAACATCTTAAGAATGGTGGGAAAGATCTGAGTGATACTAACAGGGTCATTTTTGAAGAAA / BOT
ARBA6998_282-0_B_F_2027881433 / ARBA6998_282 / ACTTCGTCAGTAACGGACGCAACTGAGAGGCGTGCTACAATT / GAGTCGAGGTCATATCGTGCAACTGAGAGGCGTGCTACAATC / TAACACGTCCTACTTTTGAAGAATAGGATTGCGCCAGTCTTACATGAGTCTGCCTATAGTGAGTC / 5350 / TAGGATTGCGCCAGTCTTACATGA / BOT / [T/C] / GATTCTGTTTGAGCATATTGGAAGTKAGCACTTTCTTTTTATTTACAGATTTTACTCCGTTGCCGYCCTTGTTATCTTCTTCAAAAGTAGGACGTGTTAC[G/A]ATTGTAGCACGCCTCTCAGTTGCTAGGGAAAATGGTTGCGGAACGGTAGGTTTGATTTGAACACTTCCATTACACTTACTGCGAATACCCCCAACAGAAG / BOT
ARBA6998_69-0_T_R_2027881432 / ARBA6998_69 / ACTTCGTCAGTAACGGACGAAAATCCGAGGCTAACTTCTCGTCA / GAGTCGAGGTCATATCGTGAAAATCCGAGGCTAACTTCTCGTCG / TTTTTCTAATGTTAGGAACATCAGATAGTCCGAAGGAATGCTGACAGGGTCTGCCTATAGTGAGTC / 6131 / ATAGTCCGAAGGAATGCTGACAGG / TOP / [A/G] / GCTTCACAGTATCYCRCGGCTTGTCACCACCCCTTGTCTTATACGGTTTCGAGTTTTTCCCATTGAGAACGCCCTCAAAATCCGAGGCTAACTTCTCGTC[G/A]CTTTTTCTAATGTTAGGAACATCAGACGCCGCCTTAACAGAAACCTCCGTTGTACATTCCTTCACCTc / BOT
ARBA6998_753-0_B_R_2027881436 / ARBA6998_753 / ACTTCGTCAGTAACGGACGTTGGAGCAGAAGCAACAGTTGCT / GAGTCGAGGTCATATCGTGTTGGAGCAGAAGCAACAGTTGCC / TGGACTTGTATGATTGCACAGGTTGCACCATACATCGAAGTGAGAGTCTGCCTATAGTGAGTC / 5003 / GTTGCACCATACATCGAAGTGAGA / BOT / [T/C] / TTCtttcGTGTTCTTGCAATGATTCWTTCATTTTATGAAWTTGATATTGCTCCTTGACCATGTAAAGAACTGCTGCTTCTGTGCAATCATACAAGTCCAG[A/G]GCAACTGTTGCTTCTGCTCCAAGCTTTCGGTCGACTGAGCGTGCACAAAGAAGGAAGGAGGTAAAACTTGTGGATTAATTAGAGCCTCTTTACTTAAGAC / TOP
ARBA8726_429-0_B_R_2027881438 / ARBA8726_429 / ACTTCGTCAGTAACGGACGTTGGAATATATCCAAAGGCTTCACAT / GAGTCGAGGTCATATCGTGTTGGAATATATCCAAAGGCTTCACAA / CAAAGCCAGATACTGTCTCATATCGTATGTGGCGCAAGTGCATTACGTCTGCCTATAGTGAGTC / 4002 / CGTATGTGGCGCAAGTGCATTAC / BOT / [T/A] / CCCCATATCGCAAAATCCRTTTAAGATYTGTGGGCCTCGTAACACGATAGTTACTTCTATTTTTTCAGGGTCACCAATATGAGACAGTATCTGGCTTTGT[A/T]TGTGAAGCCTTTGGATATATTCCAAGGACAGGAGAGAGCATCAAGATAGTTCTTGAAAGGGACGATGAAGATGAYGAAGATGATTCCAATGGTGATCACC / TOP
ARBA8726_644-0_T_R_2027881440 / ARBA8726_644 / ACTTCGTCAGTAACGGACCATTTCCTGCTAGTACCTGCATCAAA / GAGTCGAGGTCATATCGTCATTTCCTGCTAGTACCTGCATCAAT / AGAAGGAGAGGTGTTGAATTCTCTCAGATACCGAGACTTGGGCCGTCTGCCTATAGTGAGTC / 1340 / CTCAGATACCGAGACTTGGGCC / TOP / [A/T] / GTGTTACYTCTTTCGTCTCCAACATTTCGTCTCCATTATTAAGCCTTTCAAACCGAACAGCRCTCACCTTTCTCGCATTTCCTGCTAGTACCTGCATCAA[A/T]GAGAAGGAGAGGTGTTGAATTCTTATAAATAAAAACTACCGTAAGGGACAATATTTGATAGCAACAAAGTGATTACCTCGAGTTTGAAAATATGTTTCTT / BOT
ARBA8726_782-0_T_R_2027881442 / ARBA8726_782 / ACTTCGTCAGTAACGGACGCGTCATCTTCAGATTCCTCACCA / GAGTCGAGGTCATATCGTGCGTCATCTTCAGATTCCTCACCG / TGTTCCATTTTCTTTTTACAATTTTGCGTTGCGACTACCGATACGTGTCTGCCTATAGTGAGTC / 10 / TGCGTTGCGACTACCGATACGT / TOP / [A/G] / AATTTTCCTGATCAACTACATATTCATTAGAAATGTCTTCCTCTCGTCTCTTTGGAAATGCATATCCATCATATTCAGCGTCATCTTCAGATTCCTCACC[G/A]GTGTTCCATTTTCTTTTTACAATTTTTGGGAACATTCGTGTTACYTCTTTCGTCTCCAACATTTCGTCTCCATTATTAAGCCTTTCAAACCGAACAGCRC / BOT
Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
(continued)
ARBA9082_266-0_T_F_2027881443 / ARBA9082_266 / ACTTCGTCAGTAACGGACTTCTGGTGTAAAATGTGGTTCAATTTA / GAGTCGAGGTCATATCGTTTCTGGTGTAAAATGTGGTTCAATTTG / AGATGATAATTTCCTGTTGATTTTGCTACAAGTTGAAACTGTCGGAGTGTCTGCCTATAGTGAGTC / 6117 / GCTACAAGTTGAAACTGTCGGAGT / TOP / [A/G] / AGTGGTATTGCAATTTGATTCCTATGTTTTGTTGTAATCATTTTTCTGTTTGATCTGTTTAGTTTGGACTATAGTTCTGGTGTAAAATGTGGTTCAATTT[A/G]GAGATGATAATTTCCTGTTGATTTTGTTGTCCTGCAGCTATCTATCAAAGCTGGAGGTGTCGGGTTAACATTGACTGCTGCCAGCACCGTCCTCTTTGCA / TOP
ARBA9082_801-0_B_R_2027881446 / ARBA9082_801 / ACTTCGTCAGTAACGGACGAATGCATCAAAGATGTCAGGTCAATT / GAGTCGAGGTCATATCGTGAATGCATCAAAGATGTCAGGTCAATC / GAGGACTGCTAAAAAACACAACATATCACGGGCAACCTCGTCACGTCTGCCTATAGTGAGTC / 651 / ATATCACGGGCAACCTCGTCAC / BOT / [T/C] / GCTTTTGTTTTCAGGTGTCTTCAGTAAATATATACTACTTGCTTGCAAATGACACAGTTGATGATATCATGTGGTAGGTTGTGTTTTTTAGCAGTCCTCT[A/G]ATTGACCTGACATCTTTGATGCATTGATGATCTTATAATTTTCCACATCACAGGGACGTAGTGCAAAGCAAACTGGACAATTTAGGACAGGTATATCTCT / TOP
ARBA9082_927-0_T_F_2027881447 / ARBA9082_927 / ACTTCGTCAGTAACGGACTTTTGTTTGGGAACTCTGTCACATC / GAGTCGAGGTCATATCGTTTTTGTTTGGGAACTCTGTCACATG / AGTGCAATTTGAAAGTAATTGTAAGGATCTCTCATGGACGCAGTTGGTCTGCCTATAGTGAGTC / 2651 / GGATCTCTCATGGACGCAGTTG / TOP / [C/G] / GATGATCTTATAATTTTCCACATCACAGGGACGTAGTGCAAAGCAAACTGGACAATTTAGGACAGGTATATCTCTATTTTGTTTGGGAACTCTGTCACAT[C/G]TAGTGCAATTTGAAAGTAATTGTAAAAACAGTTTCTGCACAGTATGGTGCTAAGAGGTTCAGTTCTGCTTTTGTGTCTATATCTTTTWGAGAAGATTTAT / TOP
ARBA924_403-0_T_F_2027881449 / ARBA924_403 / ACTTCGTCAGTAACGGACGGGCCTCGGTTACAAATGGATGAA / GAGTCGAGGTCATATCGTGGGCCTCGGTTACAAATGGATGAG / ATTTCTTAAAGCTTTCTAAACAATTGTACCAGTGTTTCGACGGGCTAGTCTGCCTATAGTGAGTC / 1784 / GTACCAGTGTTTCGACGGGCTA / TOP / [A/G] / TTtGGATTCAAATGAATCATTTTATGTTTCTCATGTTGTTAATTTATTACAGTGATTTTGTTTTTGATCATGTTAAATGGCCTCGGTTACAAATGGATGA[A/G]GATTTCTTAAAGCTTTCTAAACAATTYAATGCTGTGAGATCTATCTTAAGGGTCCCATCTCTTGATCCTAGATATAAGGTTGCTGTTCTTGCATCAAACC / TOP
ARBA924_430-0_T_R_2027881452 / ARBA924_430 / ACTTCGTCAGTAACGGACGGACCCTTAAGATAGATCTCACAGCATTA / GAGTCGAGGTCATATCGTGGACCCTTAAGATAGATCTCACAGCATTG / ATTGTTTAGAAAGCTTTAAGAAATCTATCGTCAACCTTATTGCGCTCAGGTCTGCCTATAGTGAGTC / 5021 / TATCGTCAACCTTATTGCGCTCAG / TOP / [A/G] / CATTCGAATCAAACATGAAACTAACCTGGTTTGATGCAAGAACAGCAACCTTATATCTAGGATCAAGAGATGGGACCCTTAAGATAGATCTCACAGCATT[G/A]AATTGTTTAGAAAGCTTTAAGAAATCYTCATCCATTTGTAACCGAGGCCATTTAACATGATCAAAAACAAAATCACTGTAATAAATTAACAACATGAGAA / BOT
ARBB22348_316-0_B_R_2027881454 / ARBB22348_316 / ACTTCGTCAGTAACGGACGAAACCCCAACACCACAACCCTT / GAGTCGAGGTCATATCGTGAAACCCCAACACCACAACCCTA / TCCACACCAACCTAATCAACCCGATGTATTACGCCGAGAAGCGTCTGCCTATAGTGAGTC / 130 / CCGATGTATTACGCCGAGAAGC / BOT / [T/A] / CAAATTACAAAATTGATTGAGAGTTAATTACGATTGATTGATGATAGAAGTACCTTGTTGACGAAGTGAAAGCAGAAGGGTTGATTAGGTTGGTGTGGAA[A/T]AGGGTTGTGGTGTTGGGGTTTGAAGGAATCGTACCAACGTGCTTTGGCTTGTTTGTGTTGASTGCCTGCGGCGTGGCGTTTCCGATCCGACGGTGTGTCT / TOP
Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
(continued)
ARBB22348_378-0_B_R_2027881456 / ARBB22348_378 / ACTTCGTCAGTAACGGACACGCCACGCCGCAGGCAG / GAGTCGAGGTCATATCGTACGCCACGCCGCAGGCAC / CAACACAAACAAGCCAAAGCGACTGTCCGAGGTTGTAATCCGTCTGCCTATAGTGAGTC / 1407 / CGACTGTCCGAGGTTGTAATCC / BOT / [G/C] / GAAGTGAAAGCAGAAGGGTTGATTAGGTTGGTGTGGAAWAGGGTTGTGGTGTTGGGGTTTGAAGGAATCGTACCAACGTGCTTTGGCTTGTTTGTGTTGA[C/G]TGCCTGCGGCGTGGCGTTTCCGATCCGACGGTGTGTCTTGAAATTGCTTTTCRCAATATTCGCAGAAATACTTCTTTATCGCCat / TOP
ARBB5875_168-0_T_F_2027881457 / ARBB5875_168 / ACTTCGTCAGTAACGGACGTTTGAGCAATGGTGGCAAACTCA / GAGTCGAGGTCATATCGTGTTTGAGCAATGGTGGCAAACTCG / TCGAAGTACTGGTGATAATCGGAGTGTGGAGTTCGTTCCTAAGCGTCTGCCTATAGTGAGTC / 4092 / GAGTGTGGAGTTCGTTCCTAAGC / TOP / [A/G] / TTAAGGAAACTTATACAGGGTTTTTGCTGATGTTAAAGTGGGACAAGCAGCTCAAGTTCCAGGAAAGAGTAAACATTCTTTGAGCAATGGTGGCAAACTC[A/G]TTCGAAGTACTGGTGATAATCGGAGACCTGTTGCAGGGGCTAGTCATTTGGCTCCTAAACCGCAATCCAATTATAAGTTAAGTTCTTCCAGCCAGGCCAG / TOP
ARBB5875_428-0_B_R_2027881460 / ARBB5875_428 / ACTTCGTCAGTAACGGACAAACCTTTGACGGAGGCTGCTTT / GAGTCGAGGTCATATCGTAAACCTTTGACGGAGGCTGCTTC / GTACACCATTCACAGGATTTCTAGCAGGAGAGCTAGTTCCGTCGGTCTGCCTATAGTGAGTC / 3038 / AGCAGGAGAGCTAGTTCCGTCG / BOT / [T/C] / GGCCAGTGGGGTCAAAAGGCATGCCTTCAAAGATGCCTGTTAATACCATGGGGAGTAAATCAGTCACACCTGGCATGAGAAATCCTGTGAATGGTGTACA[A/G]AAGCAGCCTCCGTCAAAGGTTTTGTCATCTGTTCCAAAGCATAGTATGGATCAAAGAAAAGATGTACGAGAACTGCATAAACCCAAAATGTTACCGAGAC / TOP
ARBB5875_626-0_B_F_2027881461 / ARBB5875_626 / ACTTCGTCAGTAACGGACTGGATCCCATAAATTTGATTCACTGG / GAGTCGAGGTCATATCGTTGGATCCCATAAATTTGATTCACTGC / CCTTATTACTTCTTTTTGTTCAATTATGCCAGGTCGGAACTTGGTCTGTCTGCCTATAGTGAGTC / 1002 / ATGCCAGGTCGGAACTTGGTCT / BOT / [G/C] / CTCTTGGGGCGCTGATCATGAAAATCAGGACGCTTAGGAACTTGTTTAAGTGGTGGTTTACTGACCTGTCAAGCAATTGAACAAAAAGAAGTAATAAGGA[C/G]CAGTGAATCAAATTTATGGGATCCATAACATGTGCACGCATATGTGTATCGCTGTATACCTGAGCTCTTGATGACGCTACYGGTGGTCGCGGTGGTGGTC / BOT
ARBB8745_109-0_T_F_2027881463 / ARBB8745_109 / ACTTCGTCAGTAACGGACGGAAGAAAAGCCTAAGGAAAAAGAGAA / GAGTCGAGGTCATATCGTGGAAGAAAAGCCTAAGGAAAAAGAGAT / GGAAAGTCAAGGAATATTGATCATTCTCGGACAGGAGCACGAGTCGTCTGCCTATAGTGAGTC / 1825 / TTCTCGGACAGGAGCACGAGTC / TOP / [A/T] / TTGACATCTGGTTTTATTTTCAATGTTGAGATGTATACAGATCTAATGCTTGTGTGTTGTACGTTTCAGAAAGAGGAAGAAAAGCCTAAGGAAAAAGAGA[A/T]AGGAAAGTCAAGGAATATTGATCATTTTATGGAGGAGCTAAAGCAAGAGCAAGAGATGAGGGAAAGACGAAATCAAGATCGTGAACAATGGCGTGATGGG / TOP
ARBB8745_745-0_T_F_2027881465 / ARBB8745_745 / ACTTCGTCAGTAACGGACTCTTTCACCCCAGGTTTGACAATC / GAGTCGAGGTCATATCGTTCTTTCACCCCAGGTTTGACAATG / GCTCAATGAGTGAGATTTGTTGGATCTCAGCATCGCCTAGCAACGTCTGCCTATAGTGAGTC / 1935 / GATCTCAGCATCGCCTAGCAAC / TOP / [C/G] / GATTTTGATCCAAGTGGAAAACTTCCAGGATCTTTTGATGATGGTGATCCACAAACTACAAATCTTTACGTTGGAAATCTTTCACCCCAGGTTTGACAAT[C/G]TGCTCAATGAGTGAGATTTGTTGTTCTTTGAGAATTAAGGTGTGTAGTCTCATGTTGCTAACTTTACAATTTTTAGGTTGATGAAAACTTTCTTCTGCGC / TOP
CNE007J09_619-0_T_R_2027881468 / CNE007J09_619 / ACTTCGTCAGTAACGGACGCCAAAAAGCACAACACAAAGAACAAAA / GAGTCGAGGTCATATCGTGCCAAAAAGCACAACACAAAGAACAAAG / ATCAAAGTATATTCATGCATCTCCTACATCGGAGTCAGAATTGTGACGGTCTGCCTATAGTGAGTC / 6140 / TACATCGGAGTCAGAATTGTGACG / TOP / [A/G] / CACCCGGAATCACCTATACCAAAATTACCACAAAAACACATCAAAACTAATCTCAAAACCAAATCTTTTCATCCCCAAAAAGCACAACACAAAGAACAAA[G/A]AATCAAAGTATATTCATGCATCTCCAAWAAGCACAACACAAAGAACAAAGAATCRAAGTATWTTCATGCATCTCCAA / BOT
Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
(continued)
CNE007J09_850-0_B_R_2027881470 / CNE007J09_850 / ACTTCGTCAGTAACGGACGTCACTAGCCTCAAATTGAAACAGAACT / GAGTCGAGGTCATATCGTGTCACTAGCCTCAAATTGAAACAGAACC / CCTCTTGTCCAACTTTAGTGAAAGGGCGCTTGCAGGTATGTCATGTCTGCCTATAGTGAGTC / 2729 / AGGGCGCTTGCAGGTATGTCAT / BOT / [T/C] / GTCGTCACCTCAAGAAGAGACCAACCGAGTTCAGAGTCGATAAGGTTCTTCAGCCTTTTGACGGAAACAAATTCAACTTCACTAAAGTTGGACAAGAGGA[A/G]GTTCTGTTTCAATTTGAGGCTAGTGAAGACGGTGAAGTCCAGTTCCATCCAAATGCTCCGATTGATGTTGACAATTCTCCAAGTTTCGTTGCCATCAACG / TOP
COLc_525-0_B_R_2027881472 / COLc_525 / ACTTCGTCAGTAACGGACGCGAAGTTACCGTGATCGGGAACTAT / GAGTCGAGGTCATATCGTGCGAAGTTACCGTGATCGGGAACTAC / CCATCAACGTTTTTATGTTCGATGCGGTCGTTTTCTAACCCAGAGGTCTGCCTATAGTGAGTC / 5799 / ATGCGGTCGTTTTCTAACCCAGAG / BOT / [T/C] / GGCAGATCTCAATTCATCTCCTTACATGTTCTCCGATTCCGAAGCTATTCCGTTCATGGATCTTGATTACGGTGTTATCGAACATAAAAACGTTGATGGT[A/G]TAGTTCCCGATCACGGTAACTTCGATCTTTTCGCTTATGCGTTCAAAAACAACAACGTGCAGCCACATACGGAGATAGAGACACCGTCACCGTCACCGTC / TOP
COLc_949-0_T_R_2027881474 / COLc_949 / ACTTCGTCAGTAACGGACTCCTTTGATCCTTGGCCTAGTTTCC / GAGTCGAGGTCATATCGTTCCTTTGATCCTTGGCCTAGTTTCG / CATAAGCTTTACGAGAAGCGTAGGGAGCATGGACTCTATACGGCGTCTGCCTATAGTGAGTC / 2994 / GGGAGCATGGACTCTATACGGC / TOP / [C/G] / AAAAAAGAAATCAACAAGTGGGAACGACGCCGTATCCASCGAGAGAATCARCGGCATCTGTACGTTTCGCAAACCGTCCTTTGATCCTTGGCCTAGTTTC[C/G]GCATAAGCTTTACGAGAAGCGTAACGAATCGTCTTCTCGAACCTTCGATTCTTCCTCTTCTCCCTATACCTCATTACCTTAGCTTCACGATCCGCCGCCA / BOT
Nitrans_134-0_B_F_2027881478 / Nitrans_134 / ACTTCGTCAGTAACGGACGTCGTCTTGCTTCTGCTTCTCTCATT / GAGTCGAGGTCATATCGTGTCGTCTTGCTTCTGCTTCTCTCATC / TCTTAACTTCACCAGCTGTGTACAGTCTAAGTTCCGGTTCGACGTGGTCTGCCTATAGTGAGTC / 3780 / AGTCTAAGTTCCGGTTCGACGTG / BOT / [T/C] / CAAACGTGGCTAAAGAAAAGCCGGTGAAGAAACGCACCAGAAGAAAACTTGTAGGAGAATCAATGATAGAAGTGAAGTACACAGCTGGTGAAGTTAAGAG[G/A]ATGAGAGAAGCAGAAGCAAGACGAGGACCAACTAAATCACAAGCTGTTCCCATGGCGATTCTTGCGAAAACAGCACCGGAAACAGAAGCTACACCGGCAT / BOT
Pea4_1_499-0_T_R_2027881487 / Pea4_1_499 / ACTTCGTCAGTAACGGACGAGTTCGTGCCAAATCTGAAAACTTA / GAGTCGAGGTCATATCGTGAGTTCGTGCCAAATCTGAAAACTTC / TCAACAGCTTAGTAGTTAAGCAATGTCCCTGGAACCAACGACCTGTGTCTGCCTATAGTGAGTC / 3262 / GTCCCTGGAACCAACGACCTGT / TOP / [A/C] / ATATATAGACCAGATGCATYAGTGATTGGATGAACCTGAAAACAATGAATTTTAGCTTATAATGGTGAGTGGAAGGAGTTCGTGCCAAATCTGAAAACTT[C/A]ATCAACAGCTTAGTAGTTAAGCAATCTTACAGAGTCCATATATTGGTTGAAGTCCAGCCAATTTTGCATATGACATAGACTGAATGAACAAAAATAACTT / BOT
Pea4_1_580-0_T_F_2027881488 / Pea4_1_580 / ACTTCGTCAGTAACGGACTTGTTTTCAGGTTCATCCAATCACTA / GAGTCGAGGTCATATCGTTTGTTTTCAGGTTCATCCAATCACTG / TGCATCTGGTCTATATATAGACCGCAGCCGGTTGAGTATCCTAACGTCTGCCTATAGTGAGTC / 2091 / GCAGCCGGTTGAGTATCCTAAC / TOP / [A/G] / TAACTACTAAGCTGTTGATKAAGTTTTCAGATTTGGCACGAACTCCTTCCACTCACCATTATAAGCTAAAATTCATTGTTTTCAGGTTCATCCAATCACT[A/G]ATGCATCTGGTCTATATATAGACCAGATACATCCATTATTCATTGAATCTAAAAAWTRATTTTAATCACGGATACACCTGGtssgtctatatatagacca / TOP
Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
(continued)
PsANR1b_458-0_T_F_2027881490 / PsANR1b_458 / ACTTCGTCAGTAACGGACAAAGGGAACCCTAATCCATCAAGAA / GAGTCGAGGTCATATCGTAAAGGGAACCCTAATCCATCAAGAG / ATGTGGAACTCTATAAGAAGGTAACATGTCGTACTTTTGCCGTACCCAGGTCTGCCTATAGTGAGTC / 4908 / ATGTCGTACTTTTGCCGTACCCAG / TOP / [A/G] / AACTCGAACTTAGTCTCCAAGAAGTCCGAACGAAAAAGGAGAAAATTCTGACAGACGAAATCCATGAGCTGAACCAAAAGGGAACCCTAATCCATCAAGA[A/G]AATGTGGAACTCTATAAGAAGGTAACCTCATTCAACAAGAAAACACACAACTACRTGTTCRAATTTTACTGACTCTATATACTAAATCGCGTGCTGCGGA / TOP
PsANR1b_588-0_T_F_2027881492 / PsANR1b_588 / ACTTCGTCAGTAACGGACAGGTTTGTTCAAGTTCCGCTGCA / GAGTCGAGGTCATATCGTAGGTTTGTTCAAGTTCCGCTGCG / TATAGTCTCTATTTGACAACACTGCTGCGTAGGGACTATCAGGGAACGTCTGCCTATAGTGAGTC / 2216 / TGCGTAGGGACTATCAGGGAAC / TOP / [A/G] / ATTCAACAAGAAAACACACAACTACRTGTTCRAATTTTACTGACTCTATATACTAAATCGCGTGCTGCGGAACAATAGAGGTTTGTTCAAGTTCCGCTGC[A/G]CTATAGTCTCTATTTGACAACACTGCRTCACATTCACTTATRCCATTAAGTGAATGTGACAATTTAAATTTGAAAACACATATTGCTTAACAATGAGGTT / TOP
PsANR1b_880-0_T_F_2027881494 / PsANR1b_880 / ACTTCGTCAGTAACGGACGGTAGTGCAAGTGCAACAAAATGAAA / GAGTCGAGGTCATATCGTGGTAGTGCAAGTGCAACAAAATGAAC / AGTTAGAAAGACTTGGAAGTTTTGTCTATATCCCGAAAGTACAGGCCCGTCTGCCTATAGTGAGTC / 5176 / TCTATATCCCGAAAGTACAGGCCC / TOP / [A/C] / GGAGGAGAGTATCCACAAACATTATTTCAACTTCAGTTATGCCAGCCTGAGCAAGAACAGTATTGTGAAACCTCAGGTAGTGCAAGTGCAACAAAATGAA[A/C]GAGTTAGAAAGACTTGGAAGTTTTGTGAGATTTTATTAATACATTTGGAAAAGAATGACTTAAGTAGCAATGGTATGTAATMWATMataatcacattcaa / TOP
PsDHN1_124-0_B_F_2027881498 / PsDHN1_124 / ACTTCGTCAGTAACGGACGAATATGGAAACCCAGTGAACCAAG / GAGTCGAGGTCATATCGTGAATATGGAAACCCAGTGAACCAAC / TGATCAATATGGCAACCCTATCTTCCGTACTGTTACAATGTGCGCGTCTGCCTATAGTGAGTC / 5858 / CTTCCGTACTGTTACAATGTGCGC / BOT / [G/C] / CCATGGCCATGATCASTAGCACCACCGGTAGTTCCAAAATGCTGTCTACCGGCTTCACCGGTGAACCCACCGCCACTAATAGGGTTGCCATATTGATCAA[C/G]TTGGTTCACTGGGTTTCCATATTCRTCGGTCATACCTGTTTGAGCACCATATTGGTTTTGATACTGAGACATTGTTATTGTTATTCTTCACAAACAAACT / BOT
PsDHN1_320-0_T_F_2027881500 / PsDHN1_320 / ACTTCGTCAGTAACGGACTGGAACCAATCCTGAGTATGGAAA / GAGTCGAGGTCATATCGTTGGAACCAATCCTGAGTATGGAAG / ACCAACACTGGAAGTGGTTATATTGCTCCACTCCTCGACGAGAGTCTGCCTATAGTGAGTC / 3057 / ATTGCTCCACTCCTCGACGAGA / TOP / [A/G] / CATGGTCATGGTCAACAACATCGYGGAGTTGATCAAACYACAGGGTATGGGACCCACACAGGTGGTGTGGGTGGTTATGGAACCAATCCTGAGTATGGAA[A/G]CACCAACACTGGAAGTGGTTATGGTACAGGAACAGGRTACGGTGGAAGTGGAASCAATGAGTATGTGAGAGAGGATCATCATGGAGATAAGAAAGGGGTT / TOP
PsDHN1_597-0_B_F_2027881502 / PsDHN1_597 / ACTTCGTCAGTAACGGACTGGAGAGAAGAAAGGGATTATGGAT / GAGTCGAGGTCATATCGTTGGAGAGAAGAAAGGGATTATGGAC / AGATTAAGGAGAAGCTTCCTGTCTGCAATCCACGATGGACATCCGTCTGCCTATAGTGAGTC / 4012 / TCTGCAATCCACGATGGACATCC / BOT / [T/C] / ATATGCATATATCNATAGATATTAATCATGATGATGATCTAGTGTCCAGTACATCCTCCAGTACCAGGAAGCTTCTCCTTAATCTT[G/A]TCCATAATCCCTTTCTTCTCTCCATGATCAACACGATGCTCCTCTCTCACATACTCTTGACCGGTGTTTCCAATTCCACCACCACTAGCTCCGTAACCAG / BOT
Table S2. Description of the new markers surveyed on P665 x Mess RIL population map.
(continued)
PsDHN2_306-0_B_F_2027881504 / PsDHN2_306 / ACTTCGTCAGTAACGGACGACCCACACAGGTGGTGTGGT / GAGTCGAGGTCATATCGTGACCCACACAGGTGGTGTGGG / GGTTATGGAACCAAACCTGAGCCAATTCACCATGTATGCGCGATAGTCTGCCTATAGTGAGTC / 5985 / CCAATTCACCATGTATGCGCGATA / BOT / [T/G] / TCTCACATACTCAGTGGTTCCACTTCCACCGTACCCTGTTCCTGTACCATAACCACTTCCAGTGTTGGTGCTTCCATACTCAGGTTTGGTTCCATAACCM[C/A]CCACACCACCTGTGTGGGTCCCATACCCCGTGGTTTGATCAACTCCACGATGTTGTTGACCATGACCATGATCAGTAGCACCACCGGTAGTTCCATAATG / BOT
PsDHN2_485-0_B_R_2027881506 / PsDHN2_485 / ACTTCGTCAGTAACGGACGTGATCCATACCCTGTTCCATCAGTATT / GAGTCGAGGTCATATCGTGTGATCCATACCCTGTTCCATCAGTATG / GTTCTTGATTGTTCAGTACCAGTCAAGCCCGTCTAATGACCTTCTGGTCTGCCTATAGTGAGTC / 5790 / TCAAGCCCGTCTAATGACCTTCTG / BOT / [T/G] / TGGAACCACTGAGTATGTGAGAGAGGAGCATCATGGAGATAAGAAAGGGGTTATGGACAAGATTAAGGAAAAGATTCCTGGTACTGAACAATCAAGAACC[A/C]ATACTGATGGAACAGGGTATGGATCAACTGGTTATGGAGCTAGTGGTGGTGGAATTGGAAACACTGGTCAAGAGTATGTGAGAGAGGAGCGTCATGTTCA / TOP
PsDHN3_69-0_T_R_2027881508 / PsDHN3_69 / ACTTCGTCAGTAACGGACTCATACCTGTTTGAGCACCATATTGA / GAGTCGAGGTCATATCGTTCATACCTGTTTGAGCACCATATTGG / TTTGATACTGAGACATTGTTATTGTCCCACTTACGTCGCATGGGACTGTCTGCCTATAGTGAGTC / 178 / CCCACTTACGTCGCATGGGACT / TOP / [A/G] / ACCGCCACTAAYAGGGTTGCCATATTGATCAACTTGGTTCACTGGGTTTCCATATTCRTCGGTCATACCTGTTTGAGCACCATATTG[G/A]TTTTGATACTGAGACATTGTTATTGTTATTCTTCACAAACAAACTAAATAAAACAAGGTGAAGTTTTT / BOT
PUB1_153-0_T_R_2027881481 / PUB1_153 / ACTTCGTCAGTAACGGACGCGAGGAGGCGAATCTCGTAA / GAGTCGAGGTCATATCGTGCGAGGAGGCGAATCTCGTAC / CGGATTGTCTTTGGATATCAGTGAACCTATCTTCACGAGCGACACGTCTGCCTATAGTGAGTC / 4107 / GAACCTATCTTCACGAGCGACAC / TOP / [A/C] / CTTTGGAGACTAGAAGTGTTACTAGAAASGGAATCGCGCCTACCTCGGCTATGATWCGTCGGTTGTCCATACCAGTTTTYGCGAGGAGGCGAATCTCGTA[C/A]GCGGATTGTCTTTGGATATCAGTCGAACCGGTTGCTAATTTTCCAACAAGAAACTCTGCTGTCATCTTGACAGCATCTTTTGATGCTTTGTTTGCTGAAA / BOT
PUB1_225-0_B_F_2027881482 / PUB1_225 / ACTTCGTCAGTAACGGACGCGAGGTAGGCGCGATTCCG / GAGTCGAGGTCATATCGTGCGAGGTAGGCGCGATTCCC / TTCTAGTAACACTTCTAGTCTCCAACTTTGTCGAAGAAACGCAGGACAGGTCTGCCTATAGTGAGTC / 5074 / CTTTGTCGAAGAAACGCAGGACAG / BOT / [G/C] / TTAGGATCTTGTTATTGTCGTAAATCGATAGGTTGAATAGCGCTGTCACGACGTGTTCTTGGATTCTTGAATCTTTGGAGACTAGAAGTGTTACTAGAAA[C/G]GGAATCGCGCCTACCTCGGCTATGATWCGTCGGTTGTCCATACCAGTTTTYGCGAGGAGGCGAATCTCGTAMGCGGATTGTCTTTGGATATCAGTCGAAC / BOT
PUB1_363-0_B_R_2027881485 / PUB1_363 / ACTTCGTCAGTAACGGACGCCATTGTTTTTCCCGACTCGAGT / GAGTCGAGGTCATATCGTGCCATTGTTTTTCCCGACTCGAGC / CTTCGACTATGTTGTCGATCGTTAGGAAACGTCATCCACGCGGGTCTGCCTATAGTGAGTC / 1030 / TTAGGAAACGTCATCCACGCGG / BOT / [T/C] / TCCAAGAACACGTCGTGACAGCGCTATTCAACCTATCGATTTACGACAATAACAAGATCCTAATCATGGCGGCCGGAGCGATCGACAACATAGTCGAAGT[A/G]CTCGAGTCGGGAAAAACAATGGAAGCGCGRGAAAACGCYGCAGCGGCTATATATAGTTTATCAATGATAGATGATTGTAAAGTGCAAATTGGAGCAAGCT / TOP
aIllumn ID, Illumina Gene Call Software Identification. eIlumn Strand, Illumina Gene Call Software Strand.
bName, SNP marker name. fSNP, type of single nucleotide polymorphism.
cIllumiCode Name, Illumina Gene Call Software Name. gTopGenomic Seq, Top genomic sequence.
dIllumiCode Seq, Illumina Gene Call Software Code Sequence. hCustomer Strand.