Table S1 List of species analyzed in this study.
Family / GenBank Accession Number / Species / A+T (%) / G+C (%) / Total (bp)Calliphoridae / EF061800 / Calliphora vomitoria a / 80.8 / 19.2 / 318
EF061799 / Calliphora vomitoria a / 80.1 / 19.8 / 312
AF498021 / Calliphora vomitoria c / 81.1 / 18.9 / 312
AF498020 / Calliphora vomitoria c / 81.1 / 18.9 / 312
AF498019 / Calliphora vomitoria c / 81.1 / 18.9 / 312
AF498018 / Calliphora vomitoria c / 81.1 / 18.9 / 312
EF560179 / Calliphora vomitoria b / 81.2 / 18.8 / 314
EF061801 / Aldrichina grahami a,f / 80.4 / 19.6 / 337
EF061802 / Aldrichina grahami a,f / 80.4 / 19.6 / 336
EF061803 / Calliphora vicina a / 81.3 / 18.7 / 326
EF560178 / Calliphora vicina b / 81.3 / 18.7 / 327
AF498026 / Calliphora vicina c / 81.3 / 18.7 / 327
AF498025 / Calliphora vicina c / 81.3 / 18.7 / 327
AF498024 / Calliphora vicina c / 81.3 / 18.7 / 327
AF498023 / Calliphora vicina c / 81.3 / 18.7 / 327
AF498022 / Calliphora vicina c / 81.3 / 18.7 / 327
AF498034 / Lucilia caesar c / 81.8 / 18.2 / 312
AF498033 / Lucilia caesar c / 81.8 / 18.2 / 312
AF498032 / Lucilia caesar c / 81.8 / 18.2 / 312
AF498031 / Lucilia caesar c / 81.8 / 18.2 / 312
AF498038 / Lucilia illustris c / 82.1 / 17.9 / 314
AF498037 / Lucilia illustris c / 82.1 / 17.9 / 314
AF498036 / Lucilia illustris c / 82.1 / 17.9 / 314
AF498035 / Lucilia illustris c / 82.1 / 17.9 / 314
EF061804 / Hemipyrellia ligurriens a / 82.6 / 17.4 / 312
EF560185 / Lucilia cuprina b / 81.6 / 18.4 / 336
EF061805 / Lucilia cuprina a / 81.3 / 18.7 / 333
EF061793 / Lucilia sericata a / 79.6 / 20.4 / 318
EF560187 / Lucilia sericata b / 79.4 / 20.6 / 321
EF061796 / Lucilia sericata a / 79.3 / 20.7 / 318
EF061795 / Lucilia sericata a / 79.3 / 20.7 / 318
EF061794 / Lucilia sericata a / 79.0 / 21.0 / 318
AF498030 / Lucilia ampullacea c / 82.4 / 17.6 / 300
AF498029 / Lucilia ampullacea c / 82.4 / 17.6 / 300
AF498028 / Lucilia ampullacea c / 82.4 / 17.6 / 300
AF498027 / Lucilia ampullacea c / 82.4 / 17.6 / 300
EF061798 / Lucilia porphyrina a / 82.8 / 17.2 / 301
EF061797 / Lucilia porphyrina a / 82.8 / 17.2 / 301
EF061785 / Lucilia bazini a / 82.7 / 17.3 / 317
EF061784 / Lucilia bazini a / 82.8 / 17.2 / 315
EF560186 / Lucilia eximia b / 82.5 / 17.5 / 326
EF061788 / Chrysomya megacephala a / 78.9 / 21.1 / 303
EF061787 / Chrysomya megacephala a / 78.9 / 21.1 / 303
EF061786 / Chrysomya megacephala a / 78.1 / 21.9 / 302
EF071964 / Chrysomya megacephala d / 79.0 / 21.0 / 306
EF071965 / Chrysomya megacephala d / 79.0 / 21.0 / 306
EF071966 / Chrysomya megacephala d / 79.0 / 21.0 / 306
EF560175 / Chrysomya megacephala b / 79.0 / 21.0 / 306
DQ310488 / Chrysomya megacephala e / 79.0 / 21.0 / 306
EF560174 / Chrysomya bezziana b / 79.2 / 20.8 / 302
DQ310490 / Chrysomya saffranea e / 79.3 / 20.7 / 310
EF071971 / Chrysomya saffranea d / 79.3 / 20.7 / 309
EF071970 / Chrysomya saffranea d / 79.3 / 20.7 / 309
EF071969 / Chrysomya saffranea d / 79.3 / 20.7 / 309
EF071968 / Chrysomya saffranea d / 79.3 / 20.7 / 309
EF071967 / Chrysomya saffranea d / 79.3 / 20.7 / 309
EF071972 / Chrysomya saffranea d / 79.2 / 20.8 / 308
EF061792 / Chrysomya pinguis a / 79.8 / 20.2 / 303
EF061791 / Chrysomya pinguis a / 79.9 / 20.1 / 304
EF071963 / Chrysomya latifrons d / 78.5 / 21.5 / 316
EF071962 / Chrysomya latifrons d / 78.5 / 21.5 / 316
EF071961 / Chrysomya latifrons d / 78.5 / 21.5 / 316
EF071960 / Chrysomya latifrons d / 78.5 / 21.5 / 316
DQ310492 / Chrysomya latifrons e / 78.5 / 21.5 / 316
DQ310493 / Chrysomya semimetallica e / 78.5 / 21.5 / 321
EF071981 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071980 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071979 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071978 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071977 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071976 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071975 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071974 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF071973 / Chrysomya semimetallica d / 78.5 / 21.5 / 321
EF560173 / Chrysomya albiceps b / 81.7 / 18.3 / 317
EF560172 / Chrysomya albiceps b / 81.7 / 18.3 / 317
EF061790 / Chrysomya rufifacies a / 80.7 / 19.3 / 317
EF061789 / Chrysomya rufifacies a / 80.7 / 19.3 / 317
DQ310487 / Chrysomya rufifacies e / 80.7 / 19.3 / 321
EF560177 / Chrysomya rufifacies b / 81.0 / 19.0 / 320
DQ310486 / Chrysomya incisuralis e / 80.9 / 19.1 / 319
DQ310489 / Chrysomya nigripes e / 78.5 / 21.5 / 325
EF560176 / Chrysomya putoria b / 79.8 / 20.2 / 302
DQ310497 / Chrysomya flavifrons e / 80.7 / 19.3 / 322
DQ310494 / Chrysomya flavifrons e / 81.2 / 18.8 / 329
DQ310496 / Chrysomya flavifrons e / 80.7 / 19.3 / 322
DQ310495 / Chrysomya flavifrons e / 80.5 / 19.5 / 323
DQ310491 / Chrysomya varipes e / 81.0 / 19.0 / 310
EF560181 / Cochliomyia hominivorax b / 81.2 / 18.8 / 351
EF560182 / Cochliomyia macellaria b / 81.1 / 18.9 / 344
EF560192 / Hemilucilia segmentaria b / 81.2 / 17.8 / 327
EF560180 / Chloroprocta idioidea b / 81.9 / 18.1 / 320
EF061806 / Phormia regina a / 82.7 / 17.3 / 324
EF560190 / Phormia regina b / 82.9 / 17.1 / 327
EF560193 / Protophormia terraenovae b / 82.8 / 17.2 / 331
EF560188 / Mesembrinella peregrina b / 80.0 / 20.0 / 291
EU076456 / Mesembrinella bellardiana (ind. 1) b / 77.5 / 22.5 / 334
EU076455 / Mesembrinella bellardiana (ind. 2) b / 79.5 / 20.5 / 307
Muscidae / EF560191 / Stomoxys calcitrans b / 75.0 / 25.0 / 324
EF560189 / Musca domestica b / 75.9 / 24.1 / 365
EF560184 / Haematobia irritans b / 76.1 / 23.9 / 347
Average / 80.3 / 19.7 / 317
a = sequences from Song et al. 2008a;
b = this work;
c = sequences from Pickles et al. 2002 (unpublished);
d = sequences from Nelson et al. 2007;
e = sequences from Nelson et al. 2008;
f = Rognes (1991) suggested Aldrichina as synonym of Calliphora.