FOR ONLINE PUBLICATION ONLY
Table S1: List of Dicer-like, Argonaute and RDR genes genes in different plants
Gene / Accession N / Species / Gene / Accession N / SpeciesAGO / DCL
AtAGO1 / At1g48410 / Arabidopsis thaliana / AtDCL1 / At1g01040 / Arabidopsis thaliana
AtAGO2 / At1g31280 / Arabidopsis thaliana / AtDCL2 / At3g03300 / Arabidopsis thaliana
AtAGO3 / At1g31290 / Arabidopsis thaliana / AtDCL3 / At3g43920 / Arabidopsis thaliana
AtAGO4 / At2g27040 / Arabidopsis thaliana / AtDCL4 / At5g20320 / Arabidopsis thaliana
AtAGO5 / At2g27880 / Arabidopsis thaliana / OsDCL1a / Os03g02970 / Oryza sativa
AtAGO6 / At2g32940 / Arabidopsis thaliana / OsDCL1b / Os06g25250 / Oryza sativa
AtAGO7 / At1g69440 / Arabidopsis thaliana / OsDCL1c / Os05g18850 / Oryza sativa
AtAGO8 / At5g21030 / Arabidopsis thaliana / OsDCL2a / Os03g38740 / Oryza sativa
AtAGO9 / At5g21150 / Arabidopsis thaliana / OsDCL2b / Os09g14610 / Oryza sativa
AtAGO10 / At5g43810 / Arabidopsis thaliana / OsDCL3a / Os01g68120 / Oryza sativa
OsAGO1a / Os02g45070 / Oryza sativa / OsDCL3b / Os10g34430 / Oryza sativa
OsAGO1b / Os04g47870 / Oryza sativa / SHO1 / Os04g43050 / Oryza sativa
OsAGO1c / Os02g58490 / Oryza sativa / SlDCL1 / Solyc10g005130 / Solanum lycopersicum
OsAGO1d / Os06g51310 / Oryza sativa / SlDCL2a / Solyc06g048960 / Solanum lycopersicum
OsAGO2 / Os04g52540 / Oryza sativa / SlDCL2b / Solyc11g008540 / Solanum lycopersicum
OsAGO3 / Os04g52550 / Oryza sativa / SlDCL2c / Solyc11g008520 / Solanum lycopersicum
OsAGO4a / Os01g16870 / Oryza sativa / SlDCL2d / Solyc11g008530 / Solanum lycopersicum
OsAGO4b / Os04g06770 / Oryza sativa / SlDCL3 / Solyc08g067210 / Solanum lycopersicum
OsMEL1 / Os03g58600 / Oryza sativa / SlDCL4 / Solyc07g005030 / Solanum lycopersicum
OsAGO11 / Os03g47830 / Oryza sativa / ZmDCL1 / GRMZM2G040762_P01 / Zea mays
OsAGO12 / Os03g47820 / Oryza sativa / ZmDCL2 / GRMZM2G301405_P01 / Zea mays
OsAGO13 / Os03g57560 / Oryza sativa / ZmDCL3b / GRMZM2G413853_P01 / Zea mays
OsAGO14 / Os07g09020 / Oryza sativa / ZmDCL4 / GRMZM2G160473_P01 / Zea mays
OsAGO15 / Os01g16850 / Oryza sativa / SiDCL01 / Si000027m / Setaria italica
OsAGO16 / Os07g16224 / Oryza sativa / SiDCL02 / Si009168m / Setaria italica
OsAGO17 / Os02g07310 / Oryza sativa / SiDCL03 / Si027483m / Setaria italica
OsAGO18 / Os07g28850 / Oryza sativa / SiDCL04 / Si037550m / Setaria italica
SHL4 / Os03g33650 / Oryza sativa / SiDCL05 / Si034187m / Setaria italica
OsPNH1 / Os06g39640 / Oryza sativa / SiDCL06 / Si033906m / Setaria italica
SlAGO1a / Solyc06g072300 / Solanum lycopersicum / SiDCL07 / Si039134m / Setaria italica
SlAGO1b / Solyc03g098280 / Solanum lycopersicum / SiDCL08 / Si033853m / Setaria italica
SlAGO2a / Solyc02g069260 / Solanum lycopersicum
SlAGO2b / Solyc02g069270 / Solanum lycopersicum
SlAGO3 / Solyc02g069280 / Solanum lycopersicum
SlAGO4a / Solyc01g008960 / Solanum lycopersicum
SlAGO4b / Solyc06g073540 / Solanum lycopersicum
SlAGO4c / Solyc06g073530 / Solanum lycopersicum
SlAGO4d / Solyc01g096750 / Solanum lycopersicum
SlAGO5 / Solyc06g074730 / Solanum lycopersicum
SlAGO6 / Solyc07g049500 / Solanum lycopersicum
SlAGO7 / Solyc01g010970 / Solanum lycopersicum
SlAGO10a / Solyc09g082830 / Solanum lycopersicum
SlAGO10b / Solyc12g006790 / Solanum lycopersicum
SlAGO15 / Solyc03g111760 / Solanum lycopersicum
ZmAGO1a / GRMZM2G441583_P01 / Zea mays / RDR
ZmAGO1b / AC209206.3_FGP011 / Zea mays / AtRDR1 / At1g14790 / Arabidopsis thaliana
ZmAGO1c / GRMZM2G039455_P01 / Zea mays / AtRDR2 / At4g11130 / Arabidopsis thaliana
ZmAGO1d / GRMZM2G361518_P01 / Zea mays / AtRDR3 / At2g19910 / Arabidopsis thaliana
ZmAGO1e / GRMZM2G162525_P01 / Zea mays / AtRDR4 / At2g19920 / Arabidopsis thaliana
ZmAGO2 / GRMZM2G007791_P01 / Zea mays / AtRDR5 / At2g19930 / Arabidopsis thaliana
ZmAGO4d / GRMZM2G141818_P02 / Zea mays / AtRDR6 / At3g49500 / Arabidopsis thaliana
ZmAGO5a / GRMZM2G461936_P02 / Zea mays / OsRDR1 / Os02g50330 / Oryza sativa
ZmAGO5b / GRMZM2G059033_P01 / Zea mays / OsRDR2 / Os04g39160 / Oryza sativa
ZmAGO5c / GRMZM2G347402_P01 / Zea mays / OsRDR3 / Os01g10130 / Oryza sativa
ZmAGO7 / GRMZM2G354867_P01 / Zea mays / OsRDR4 / Os01g10140 / Oryza sativa
ZmAGO10a / AC189879.3_FGP003 / Zea mays / SHL2 / Os01g34350 / Oryza sativa
ZmAGO10b / GRMZM2G079080_P02 / Zea mays / SlRDR1 / Solyc05g007510 / Solanum lycopersicum
ZmAGO18a / GRMZM2G105250_P01 / Zea mays / SlRDR2 / Solyc03g114140 / Solanum lycopersicum
ZmAGO18b / GRMZM2G457370_P01 / Zea mays / SlRDR3a / Solyc12g008410 / Solanum lycopersicum
ZmAGO18c / GRMZM2G457370_P02 / Zea mays / SlRDR3b / Solyc06g051170 / Solanum lycopersicum
SiAGO01 / Si016190m / Setaria italica / SlRDR6a / Solyc04g014870 / Solanum lycopersicum
SiAGO02 / Si028786m / Setaria italica / SlRDR6b / Solyc08g075820 / Solanum lycopersicum
SiAGO03 / Si028918m / Setaria italica / ZmRDR1 / GRMZM2G481730_P01 / Zea mays
SiAGO04 / Si029819m / Setaria italica / Zmmop1 / GRMZM2G042443_P01 / Zea mays
SiAGO05 / Si032269m / Setaria italica / ZmRDR3 / GRMZM2G357825_P01 / Zea mays
SiAGO06 / Si028876m / Setaria italica / ZmRDR4 / GRMZM2G145201_P01 / Zea mays
SiAGO07 / Si021039m / Setaria italica / ZmRDR5 / GRMZM2G347931_P01 / Zea mays
SiAGO08 / Si021147m / Setaria italica / SiRDR01 / Si020080m / Setaria italica
SiAGO09 / Si005792m / Setaria italica / SiRDR02 / Si016153m / Setaria italica
SiAGO10 / Si005737m / Setaria italica / SiRDR03 / Si008726m / Setaria italica
SiAGO11 / Si000241m / Setaria italica / SiRDR04 / Si008344m / Setaria italica
SiAGO12 / Si004216m / Setaria italica / SiRDR05 / Si000292m / Setaria italica
SiAGO13 / Si012936m / Setaria italica / SiRDR06 / Si000086m / Setaria italica
SiAGO14 / Si009227m / Setaria italica / SiRDR07 / Si015317m / Setaria italica
SiAGO15 / Si009244m / Setaria italica / SiRDR08 / Si015045m / Setaria italica
SiAGO16 / Si040585m / Setaria italica / SiRDR09 / Si010985m / Setaria italica
SiAGO17 / Si034423m / Setaria italica / SiRDR10 / Si011006m / Setaria italica
SiAGO18 / Si034005m / Setaria italica / SiRDR11 / Si009219m / Setaria italica
SiAGO19 / Si040253m / Setaria italica