Supplementary Fig. 1

Fig. S1: Neighbor-joining phylogenetictree of the RdRp proteins of RVA and other members of the family Tombusviridae. Bootstrap values, expressed as a percentage of 1,000 replications, are given at branching points. The full virus names are as follows: AMCV (artichoke mottled crinkle virus);AnFBV (Angelonia flower break virus);BBSV (beet black scorch virus); CaMoV (carrot mottle virus);CarMV (carnation mottle virus), CBV (cucumber Bulgaria virus);CIRV (carnation Italian ringspot virus);CLSV (cucumber leaf spot virus);CMoMV (carrot mottle mimic virus);CNV (cucumber necrosis virus);CRSV (carnation ringspot virus);CymRSV(cymbidium ringspot virus);EMCV (eggplant mottled crinkle virus);FNSV (furcraea necrotic streak virus);GALV (grapevine Algerian latent virus);GaMV (galinsoga mosaic virus);JCSMV (Johnsongrass chlorotic stripe mosaic virus);MCMV (maize chlorotic mottle virus);MNeSV (maize necrotic streak virus);MNSV (melon necrotic spot virus);MPV (Moroccan pepper virus);MWLMV (maize white line mosaic virus);OCSV (oat chlorotic stunt virus);OLV (olive latent virus 1);PLCV (pelargonium leaf curl virus);PLPV (pelargonium line pattern virus);PMV (panicum mosaic virus);PNSV (pelargonium necrotic spot virus);PoLV (pothos latent virus);RCNMV (red clover necrotic mosaic virus);RrLDV (rosarugosa leaf distortion virus);TBSV (tomato bushy stunt virus);TCV (turnip crinkle virus);TNV-A (tobacco necrosis virus A);TNV-D (tobacco necrosis virus D);YSV (yam spherical virus).

Supplementary Table 1. List of 59 rice samples and their collection locations in South Korea

Rice No. / Collection location / Rice No. / Collection location
1 / Gunsan, Jeollabuk-do, Korea / 31 / Naju, Jeollanam-do, Korea
2 / Gunsan, Jeollabuk-do, Korea / 32 / Naju, Jeollanam-do, Korea
3 / Gunsan, Jeollabuk-do, Korea / 33 / Naju, Jeollanam-do, Korea
*4 / Gunsan, Jeollabuk-do, Korea / 34 / Naju, Jeollanam-do, Korea
5 / Gunsan, Jeollabuk-do, Korea / 35 / Gindo, Jeollanam-do, Korea
6 / Gunsan, Jeollabuk-do, Korea / 36 / Gindo, Jeollanam-do, Korea
*7 / Buan, Jeollabuk-do, Korea / 37 / Gindo, Jeollanam-do, Korea
*8 / Buan, Jeollabuk-do, Korea / 38 / Gindo, Jeollanam-do, Korea
*9 / Buan, Jeollabuk-do, Korea / 39 / Gindo, Jeollanam-do, Korea
*10 / Buan, Jeollabuk-do, Korea / 40 / Gindo, Jeollanam-do, Korea
*11 / Buan, Jeollabuk-do, Korea / 41 / Gindo, Jeollanam-do, Korea
*12 / Buan, Jeollabuk-do, Korea / *42 / Gindo, Jeollanam-do, Korea
13 / Buan, Jeollabuk-do, Korea / 43 / Icheon, Gyeonggi-do, Korea
*14 / Buan, Jeollabuk-do, Korea / 44 / Icheon, Gyeonggi-do, Korea
15 / Buan, Jeollabuk-do, Korea / *45 / Icheon, Gyeonggi-do, Korea
16 / Buan, Jeollabuk-do, Korea / *46 / Icheon, Gyeonggi-do, Korea
17 / Buan, Jeollabuk-do, Korea / *47 / Icheon, Gyeonggi-do, Korea
18 / Buan, Jeollabuk-do, Korea / *48 / Icheon, Gyeonggi-do, Korea
*19 / Buan, Jeollabuk-do, Korea / 49 / Gimpo, Gyeonggi-do, Korea
20 / Jangheung, Jeollanam-do, Korea / 50 / Gimpo, Gyeonggi-do, Korea
21 / Cheongju, Chungcheongbuk-do, Korea / *51 / Gimpo, Gyeonggi-do, Korea
22 / Cheongju, Chungcheongbuk-do, Korea / *52 / Gimpo, Gyeonggi-do, Korea
23 / Seocheon, Chungcheongnam-do,Korea / *53 / Gimpo, Gyeonggi-do, Korea
24 / Taean, Chungcheongnam-do, Korea / 54 / Incheon Metropolitan City
25 / Hamyang, Gyeongsangnam-do, Korea / *55 / Incheon Metropolitan City
26 / Uiseong, Gyeongsangbuk-do, Korea / 56 / Wando, Jeollanam-do, Korea
27 / Uiseong, Gyeongsangbuk-do, Korea / 57 / Wando, Jeollanam-do, Korea
28 / Uiseong, Gyeongsangbuk-do, Korea / *58 / Naju, Jeollanam-do, Korea
*29 / Naju, Jeollanam-do, Korea / 59 / Naju, Jeollanam-do, Korea
*30 / Naju, Jeollanam-do, Korea

*Rice samples infected by rice virus A.