Supplementary Figure 2 Chao Estimated Richness Across the Different Classrooms, with Standard

Supplementary Figure 2 Chao Estimated Richness Across the Different Classrooms, with Standard

Supplementary Figure 1 Characteristics of the sampled building. A. Floor plan of building and the classrooms sampled. Eight petri dish samplers were per used room, two at each of four spots (marked with an X). Samplers collected passively settled dust on top of shelves for the duration of the teaching semester, approximately three months. B. All outgoing air from the second floor teaching laboratory classrooms exit the building as exhaust through a plume on the roof. The supply air is a combination of return air from the first floor lecture rooms and outdoor air, which enters the ventilation system through grills above the second floor.

A.

Description Floorplan x

B.

Description Slide32

Supplementary Figure 2 Chao Estimated Richness across the different Classrooms, with standard deviation shaded.

Rplot

Supplementary Figure 3 A rank “frequency” distribution of indoor air fungal OTUs in teaching classrooms. The OTUs are ranked in descending order based on how frequently they appeared in the samples, with the most frequent OTUs appearing on the left of the graph. The maximum number of samples is 34, and the majority of OTUs appeared in only one sample.


Supplementary Figure 4 Nonmetric multidimensional scaling showing the relationship between the composition of fungal communities in different teaching classrooms, based on the Morisita-Horn dissimilarity index. Observed samples (top: black) showed the greatest distance between samples. In the manipulations, puffball taxa were reassigned to typical indoor taxa (middle: green) and the abundances of the puffball taxa were equalized with non-puffball taxa (bottom: coral). Classroom E samples, circled in each, are distinct from other classroom samples in all cases but to a lesser degree in the manipulations than in the observed.

Supplementary Table 1 OTUs present in negative controls and removed from all other samples.

BLAST match / Sequence
Neurospora discreta / CAGAGTTGCAAAACTCCCACAAACCATCGCGAATCTTACCCGTACGGTTGCCTCGGCGCTGGCGGTCTGGAATGGCCTTCGGGCCCTCCCGGATCCTTGGGTCTCCCGCTCGCGGGAGGCTGCCCGCCGGAGTGCCGAAACTAAACTCTTGATATTTTATGTTTCTCTGAGTAAACTTTTAAATAAGTCA
Neurospora discreta / CAGAGTTGCAAAACTCCCACAAACCATCGCGAATCTTACACGTACGGTTGCCTCGGCGCTGGCGGTCTGGAATGGCCTTCGGGCCCTCCCGGATCCTTGGGTCTCTCGCTCGCGGGAGGCTGCCCGCCGGAGTGCCGAAACTACACTCTTGATATTTTATGTTTCTCTGAGTAAACTTTTAAATAAGTCA
Neurospora crassa / CAGAGTTGCAAAACTCCCACAAACCATCGCGAATCTTACCCGTACGGTTGCCTCGGCGCTGGCGGTCCGGAAAGGCCTTCGGGCCCTCCCGGATCCTCGGGTCTCCCGCTCGCGGGAGGCTGCCCGCCGGAGTGCCGAAACTAAACTCTTGATATTTTATGTCTCTCTGAGTAAACTTTTAAATAAGTCA
Rhizopogon sp. / ACGAATATAATTCGAGGGGTTGTCGCTGGCCTCGCTCGCTCGCACGAGGCATGTGCACGCTTCTTGTTTTTTCATAACTCTCACCTGTGCACCTAATGTAGGATGCCTCTCCTCCGGGAGGGGGGACCTATGTCTTCATATACATCTTCGTGTAGAAAGTCTTTGAATGTTTACTATCATCTAGTCGCGACTTCTAGGAGACGCGATTCTTTGAGATAAAAGTTATTA
Rhizopogon salebrosus / ACGAATATAATTCGAGGGGTTGTCGCTGGCCTCGCTCGCGCGAGGCATGTGCACGCTTCTCGTTTTTCTCTCAACTCACCTGTGCACCTAATGTAGGATGCCTCTCCTCCGGGAGGGGGGACCTATGTCTTCGTAACATCTTCGTGTAGAAAGTCTTTGAATGTTTACTATCATCGAGTCGCGACTTCTAGGAGACGCGATTCTTTGAGATAAAAGTTATTA
Xenopolyscytalum sp. / CAGAGAACATCGCCCTCACGGGTGACTCTCCAACCCTATGTTATTGTACCCTTGTTGCTTTGGCGAGCCGCTTCGGCCACCGGCTTCTGCTGGTGTGTGCTCGCCAGAGGACCCCAAACTCTGAATATTAATGTCGTCTGAGTACTATATAATAGTTA
Phialocephala virens / CAGAGTTCATGCCCTTCGGGGTAGACCTCCCACCCTTGTGTATTTATACCTTTGTTGCTTTGGCAGGCCGCCGGGCTCGTCCCGGCTACCGGCTTCGGCTGGTGCGTGCCTGCCAGAGGACCCCAAACTCTGAATGTTAGTGTCGTCTGAGTACTATATAATAGTTA
Meliniomyces sp. / AAGAATCGCCCCGTTTTTTATAAATGGGTTCTATTCCCAAACCGTGTATACATACCTTTGTTGCTTTGGCAGGCCGCCTCCGGGCGTCGGCTCCGGCTGATAGTGCCTGCCAGAGGACCCAAACTCTGTGTTTAGTGATGTCTGAGTACTATATAATAGTTA
Trichoderma sp. / CCGAGTTTACAACTCCCAAACCCCAATGTGAACGTTACCAATCTGTTGCCTCGGCGGGATCTCTGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCCGCCGGAGGACCAACCAAACTCTTTTTCTCTCTCCGTCGCGGCTCCGTCGCGGCTCTGTTTTATTTTTGCTCTGAGCCTTTCTCGGCGACCCCTAGCGGGCGTCTCGAAAATGAATCA

Supplementary Table 2 Details of the data manipulations to vary either the quantitative (Manipulation 1) or qualitative (Manipulation 2) differences between Classroom E and the other classrooms.

Manipulation 1
Puffball taxa / Observed Read Abundance / Reassigned to / Observed Read Abundance / New Read Abundance
1 / Battarrea / 5750 / Epicoccum / 1928 / 7678
2 / Pisolithus / 1498 / Cladosporium / 1416 / 2914
3 / Battarrea / 425 / Alternaria / 1087 / 1512
4 / Battarrea / 348 / Penicillium / 1069 / 1417
5 / Calvatia / 180 / Cladosporium / 815 / 995
6 / Lycoperdon / 138 / Nigrospora / 636 / 774
7 / Handkea / 134 / Peyronellaea / 636 / 770
8 / Pisolithus / 78 / Cryptococcus / 316 / 394
9 / Pisolithus / 15 / Cladosporium / 275 / 290
Manipulation 2
Puffball taxa / Observed Read Abundance / New Read Abundance
1 / Battarrea / 5750 / 779
2 / Pisolithus / 1498 / 1498
3 / Battarrea / 425 / 425
4 / Battarrea / 348 / 348
5 / Calvatia / 180 / 180
6 / Lycoperdon / 138 / 138
7 / Handkea / 134 / 134
8 / Pisolithus / 78 / 78
9 / Pisolithus / 15 / 15

Supplementary Table 3 Characterization of the taxa identified using a BLAST search. Abundance rank 1-20 follows the order in Figure 1c.

Abundance rank / Taxa / % Sequence Overlap / Length (bp)
1 / Battarrea sp. / 98.5 / 271
2 / Pisolithus sp. / 99.4 / 168
3 / Epicoccum nigrum / 99.3 / 142
4 / Cladosporium sp. / 100 / 155
5 / Alternaria sp. / 100 / 164
6 / Penicillium sp. / 100 / 58
7 / Cladosporium sp. / 100 / 154
8 / Nigrospora sp. / 100 / 152
9 / Phoma glomerata / 99.3 / 138
10 / Aureobasidium pullulans / 100 / 179
11 / Cryptococcus arnescens / 100 / 132
12 / Cryptococcus victoriae / 100 / 130
13 / Cryptococcus sp. / 100 / 152
14 / Pithomyces chartarum / 99.5 / 200
15 / Stemphylium sp. / 100 / 174
16 / Cladosporium sp. / 96.0 / 148
17 / Battarrea sp. / 99.6 / 276
18 / Cryptococcus magnus / 100 / 137
19 / Battarrea spp. / 83.8 / 253
20 / Rhodotorula fujisanensis / 99.3 / 136
n/a / Calvatia sp. / 99.7 / 283
n/a / Lycoperdon perlatum / 98.9 / 275
n/a / Handkea subcretacea / 100 / 282
n/a / Pisolithus sp. / 97.6 / 168
n/a / Pisolithus sp. / 99.4 / 158
n/a / Teratosphaeria microspora / 99.3 / 151

Supplementary Table 4 Differences, based on three dissimilarity indices, between Classroom E and all other Classrooms. Significance (p-value) and variation explained (R2) of the fungal community composition between the Classrooms determined by analysis of variance based on distance matrices (adonis). Also included is the mean value difference between Classrooms.

Classroom E and all other Classrooms (observed) / Manipulation 1: Taxonomy reassigned (quantitative differences) / Manipulation 2: Abundances reassigned (qualitative differences)
Morisita-Horn
p-value / 0.001 / 0.001 / 0.001
R2 / 0.60 / 0.36 / 0.58
Mean value difference / 0.91 / 0.58 / 0.57
Sorensen
p-value / 0.001 / 0.001 / 0.001
R2 / 0.24 / 0.20 / 0.22
Mean value difference / 0.86 / 0.80 / 0.80
Canberra
p-value / 0.001 / 0.001 / 0.001
R2 / 0.12 / 0.10 / 0.12
Mean value difference / 0.97 / 0.94 / 0.93