Supplemental Table 1 Mean Gene Upregulation (Fold Change) in Wheat Plant Leaves Containing

Supplemental Table 4 Mean gene down regulation (fold change) in leaves of Russian wheat aphid (RWA)-susceptible (Dn0) wheat plants at 24 h after phloem feeding by RWA biotype 1

Mean Fold

Gene IDSpeciesPutative ID Change (–) a P (t-test) E-value

Hydrolases b

BQ172090ricePhospholipase-like -3.860.08983.0E-48

CD921471barleyß-glucosidase -2.570.48634.0E-80

CA625310riceMutT/nudix protein-like -2.020.26964.0E-37

Stress Response

BJ254972wheatPutative major allergen Phl p 5 -2.830.44224.0E-16

CA635043ricePutative Pollen specific protein C13 -2.580.36048.0E-06

BJ310786riceVon Willebrand factor type A domain

containing protein-2.600.20807.0E-07

Signal Transduction

CA683463Neurospora Predicted protein -2.440.24533.0E-13

CA693401ricePutative response regulator 9 -2.380.38192.0E-28

CA659851ricePutative ADP-ribosylation factor -2.140.02579.0E-15

CA715067maizeRas-related protein Rab-2-B -2.570.33382.0E-30

CA624824barleyBet3-like protein component-2.020.28419.0E-23

CD890594ricePutative phytochelatin synthetase -2.610.10352.0E-47

CA601620ricePutative WD repeat domain 45 -2.260.24511.0E-29

Protein Kinases

CA735686riceMitogen-activated protein kinase -2.450.18103.0E-28

CA598474riceOSJNBa0016N04.15 protein -2.030.50425.0E-17

CA686860wheatTAK33-4.190.03902.0E-47

CA682481ricePutative serine/threonine kinase protein -2.420.39213.0E-29

BJ315672ricePutative kinase-binding protein 1 -2.180.46731.0E-09

BJ318774ricePutative FHA domain-2.030.40314.0E-33

Monooxygenases/Oxidoreductases

CA638864riceOSJNBa0027H09.6 protein -3.120.27449.0E-24

BT009179 riceOSJNBb0089B03.6 protein-2.940.02493.0E-80

Calcium & Iron Ion Binding

CA690860ryegrass4-coumarate--CoA ligase 4CL2 0.01981.0E-12

BJ280134ricePutative class III peroxidase 106 precursor-2.290.41283.0E-30

CA733642ricePutative peroxidase -2.210.06275.0E-42

BJ231486ricePutative pectinacetylesterase -2.180.34144.0E-31

CA683063bluegrassSuperoxide dismutase -2.540.32535.0E-37

CA623910ricePutative mitochondrial receptor subunit -2.290.42624.0E-11

CK165182ricePutative carboxylate oxidase -2.130.10515.0E-18

CA621406ricePutative urease accessory protein G -2.900.29195.0E-20

CA742615ricePutative makorin RING finger protein-2.560.43353.0E-24

CD867734barleyMetallothionein-like protein (fragment)-2.050.32806.0E-18

CK154453riceO-methyltransferase -2.320.00959.0E-17

Salycilate Signaling

CA722042riceDisease resistance response protein-3.140.00822.0E-09

Detoxification

CD873926riceRhodanese-like domain-containing protein -2.370.35531.0E-16

DNA/Nucleic Acid Binding

BJ234710riceOSJNBb0052B05.12 protein-3.340.03412.0E-19

BJ252983frogEPAB protein-3.180.27992.0E-11

BQ607159ricePutative tuber-specific &

sucrose-responsive binding factor -2.940.04361.0E-19

CA617565riceAuxin response factor 2 (fragment) -2.640.21602.0E-30

CA681076maizePolyprotein -2.490.44509.0E-15

CA618012maize60S ribosomal protein L17 -2.460.24011.0E-22

CA687700Aspergillus40S ribosomal protein S5 -2.190.32823.0E-21

CA604568beetEukaryotic translation initiation factor-2.780.05681.0E-21

CD490719ricePutative cyclophilin -2.230.40161.0E-45

CA624167riceBHLH protein family-like -2.860.36446.0E-26

CA683257ricePutative AGO1 homologous protein -2.470.11063.0E-37

CD490412riceOSJNBa0084A10.13 protein -2.030.11646.0E-21

CA614208maizeretrotransposon Cinful-1-2.020.37782.0E-09

Actin Cytoskeleton Biogenesis

CA619934riceProfilin A -3.230.03453.0E-36

BJ213208riceOSJNBb0079B02.14 protein-2.340.04011.0E-21

CA595213ricePutative SKP1 interacting partner -2.590.25538.0E-21

Intracellular Transport

BG907833*riceOSJNBa0043L24.9 protein -2.480.11453.0E-37

CA616728ricePPR protein-like protein-2.330.24132.0E-33

CA619966ArabidopsisGuanine nucleotide-exchange-like protein -2.280.21235.0E-30

BJ316737ricePutative spop -2.500.04198.0E-24

Electron Transport

CA642777ricePutative ATP cell differentiation

binding protein -2.360.28292.0E-32

Metabolism

BJ260653riceGlycerophosphoryl diester

phosphodiesterase 2-like protein -2.630.01653.0E-39

AF292559AzotobacterGreen fluorescence protein -2.320.51543.0E-86

CA729941ricePutative linalool synthase -3.050.13032.0E-17

BE398377wheat-gliadin -3.230.05353.0E-22

a Mean log2 transcript values present or marginal in 3 of 4 arrays hybridized with Dn0 probes.

bFunctional classification determined by GO Annotation Pub Med .