Supplemental table 1.Genes inducedmore than 3-fold for planktonic cells of EDL933 vs. 86-24. Cellswere grown inLB mediumat 37oCto a turbidity of 4.0.
Gene / EDL933signal / Fold
change / 86-24
signal / Descriptions
Z1445 / 2362 / 10809 / 0.2 / unknown protein encoded by bacteriophage BP-933W
stx1B / 1812 / 5405 / 0.4 / shiga-like toxin 1 subunit B encoded within prophage CP-933V
Z5886 / 972 / 2195 / 0.5 / Unknown function
Z1444 / 3053 / 1911 / 1.1 / putative serinethreoninekinase encoded by bacteriophage BP-933W
Z1446 / 1632 / 1261 / 1.1 / unknown protein encoded by bacteriophage BP-933W
stx1A / 2610 / 955 / 1.2 / shiga-like toxin 1 subunit A encoded within prophage CP-933V
Z2114 / 925 / 891 / 0.7 / unknown protein encoded within prophage CP-933O
Z1957 / 345 / 832 / 0.4 / transposase for IS629
Z2116 / 488 / 832 / 1.1 / unknown protein encoded within prophage CP-933O
Z3357 / 589 / 549 / 1.1 / putative regulatory protein CII of prophage CP-933V
Z1443 / 2422 / 362 / 2.2 / unknown protein encoded by bacteriophage BP-933W
Z5881 / 703 / 338 / 1.4 / unknown function
Z1448 / 3158 / 256 / 10.7 / regulatory protein Cro of bacteriophage BP-933W
Z3388 / 89 / 208 / 0.4 / Unknown function
Z3348 / 199 / 169 / 1 / unknown protein encoded within prophage CP-933V
Z1469 / 2006 / 158 / 17.8 / putative lysozyme protein R of bacteriophage BP-933W
Z3341 / 1218 / 147 / 4.4 / unknown protein encoded within prophage CP-933V
Z3347 / 142 / 147 / 1.2 / unknown protein encoded within prophage CP-933V
Z1811 / 464 / 137 / 3.8 / putative tail component encoded by prophage CP-933N
Z5888 / 453 / 119 / 1.6 / unknown function
Z5889 / 201 / 119 / 0.6 / unknown function
Z5884 / 301 / 91 / 1.9 / unknown function
csgC / 5373 / 84 / 64 / putative curli production protein
csgB / 8233 / 79 / 105 / minor curlin subunit precursor, similar roCsgA
Z3083 / 440 / 69 / 7.1 / putative tail fiber component M of prophage CP-933U
Z3342 / 1047 / 69 / 17.1 / unknown protein encoded within prophage CP-933V
Z5878 / 764 / 69 / 11.8 / putative integrase
csgA / 7537 / 49 / 158.4 / curlin major subunit, coiled surface structures; cryptic
Z5882 / 483 / 42 / 8.4 / unknown function
Z2112 / 662 / 37 / 26.8 / putative ClpP-like protease encoded within prophage CP-933O
Z2113 / 887 / 32 / 21.9 / unknown protein encoded within prophage CP-933O
Z2117 / 575 / 30 / 15.3 / unknown protein encoded within prophage CP-933O
b0936 / 22 / 28 / 0.4 / hypothetical protein
b1044 / 3937 / 28 / 163.3 / hypothetical protein
csgF / 5286 / 28 / 208.9 / curli production assemblytransport component, 2nd curlioperon
csgE / 5339 / 24 / 213.7 / curli production assemblytransport component, 2nd curlioperon
csgG / 4930 / 24 / 173.9 / curli production assemblytransport component, 2nd curlioperon
prpB / 2086 / 23 / 73.8 / putative phosphonomutase 2
Z1373 / 228 / 23 / 8 / unknown protein encoded by cryptic prophage CP-933M
prpD / 2341 / 21 / 112.2 / hypothetical protein
prpE / 1512 / 18 / 127 / putative propionyl-CoAsynthetase
csgD / 7347 / 17 / 418.5 / putative 2-component transcriptional regulator for 2nd curlioperon
prpC / 2513 / 17 / 151.5 / putative citrate synthase; propionate metabolism?
Z2115 / 584 / 16 / 30.6 / unknown protein encoded within prophage CP-933O
Z5887 / 381 / 16 / 29 / unknown function
Z5885 / 200 / 13 / 18 / putative resolvase
b0964 / 945 / 13 / 78.4 / hypothetical protein
appC / 1965 / 12 / 170.7 / probable third cytochromeoxidase, subunit I
rpoS / 5905 / 11 / 510.3 / RNA polymerase, sigma S (sigma38) factor
b1373 / 21 / 9 / 2.3 / tail fiber assembly protein homolog from lambdoidprophageRac
yhiM / 4156 / 9 / 419 / hypothetical protein
Z1354 / 2790 / 9 / 325.2 / putative endopeptidase of cryptic prophage CP-933M
appB / 1774 / 9 / 312.7 / probable third cytochromeoxidase, subunit II
Z1218 / 167 / 8 / 31.6 / hypothetical protein
b0753 / 3270 / 8 / 406.2 / putative homeobox protein
yaiC / 912 / 8 / 119 / hypothetical protein
yciE / 6473 / 8 / 856.1 / hypothetical protein
Z5883 / 512 / 7 / 62.6 / Unknown function
yibH / 823 / 7 / 102.7 / putative membrane protein
Z1362 / 667 / 6 / 96.4 / unknown protein encoded by cryptic prophage CP-933M
Z1921 / 3926 / 6 / 780.6 / unknown protein encoded by prophage CP-933X
yohC / 1139 / 6 / 139.4 / hypothetical protein
Z5148 / 935 / 6 / 181.3 / unknown function
aidB / 4365 / 6 / 769.2 / putative acyl coenzyme A dehydrogenase
ybcK / 423 / 6 / 65.5 / hypothetical protein
Z1215 / 294 / 6 / 52.2 / unknown
Z1353 / 3596 / 6 / 821.2 / putative antirepressor protein of cryptic prophage CP-933M
Z1364 / 1531 / 6 / 255.2 / unknown protein encoded by cryptic prophage CP-933M
Z1663 / 734 / 6 / 111.8 / unknown function
yciG / 6493 / 6 / 1254.5 / hypothetical protein
gabT / 2724 / 5 / 575.5 / 4-aminobutyrateaminotransferase activity
Z1209 / 1547 / 5 / 317.8 / unknown function
b1683 / 2688 / 5 / 496 / hypothetical protein
yceK / 1925 / 5 / 408.4 / hypothetical protein
yhbO / 3614 / 5 / 686.6 / hypothetical protein
yhiO / 1452 / 5 / 232.1 / hypothetical protein
Z1125 / 255 / 5 / 37.9 / unknown function
Z1180 / 196 / 5 / 25.7 / unknown function
Z1219 / 611 / 5 / 107.1 / unknown function
Z1226 / 567 / 5 / 124.2 / unknown
Z3962 / 2553 / 5 / 515.6 / unknown function
Z4088 / 42 / 5 / 5.2 / unknown function
b1428 / 822 / 5 / 173.7 / hypothetical protein
b1684 / 2529 / 5 / 494.7 / hypothetical protein
b1955 / 1252 / 5 / 266.7 / hypothetical protein
gabP / 1167 / 5 / 222.3 / transport permease protein of gamma-aminobutyrate
gapC / 4541 / 5 / 1010 / glyceraldehyde-3-phosphate dehydrogenase
gcd / 1455 / 5 / 292 / glucose dehydrogenase
hyaA / 1043 / 5 / 234.8 / hydrogenase-1 small subunit
narK / 590 / 5 / 112.7 / nitrite extrusion protein
yagT / 1010 / 5 / 229.8 / putative xanthinedehydrogenase (EC 1.1.1.20)
ydeI / 2679 / 5 / 513.7 / hypothetical protein
yiaG / 6211 / 5 / 1394 / hypothetical protein
Z1350 / 2456 / 5 / 779.8 / putative holin protein of cryptic prophage CP-933M
Z1367 / 797 / 5 / 160.7 / unknown protein encoded by cryptic prophage CP-933M
b1681 / 2518 / 5 / 544.1 / hypothetical protein
b1953 / 3377 / 5 / 731.7 / hypothetical protein
narW / 1004 / 5 / 226.9 / cryptic nitrate reductase 2 delta subunit
otsA / 3342 / 5 / 775.4 / trehalose-6-phosphate synthase
yagS / 698 / 5 / 168.1 / hypothetical protein
yghA / 3372 / 5 / 637.1 / putative oxidoreductase
yhfG / 1800 / 5 / 402.1 / hypothetical protein
ymdC / 1344 / 5 / 244.2 / putative synthase
gabD / 2727 / 4 / 574.9 / succinate-semialdehydedehydrogenase, NADP-dependent activity
narU / 2537 / 4 / 587 / nitrite extrusion protein 2
yhjG / 1234 / 4 / 227.5 / hypothetical protein
yjgB / 709 / 4 / 194.9 / putative oxidoreductase
Z1136 / 155 / 4 / 37.2 / unknown function
Z1178 / 557 / 4 / 114.2 / putative receptor
Z1223 / 666 / 4 / 178.4 / unknown function
Z1923 / 6583 / 4 / 1564.9 / unknown protein encoded by prophage CP-933X
Z2220 / 687 / 4 / 176.3 / putative sensor kinase
appA / 1561 / 4 / 382 / phosphoanhydridephosphorylase; pH 2.5 acid phosphatase; periplasmic
b1682 / 2023 / 4 / 438.6 / putative ATP-binding component of a transport system
b2809 / 4511 / 4 / 1106.6 / hypothetical protein
fic / 2234 / 4 / 536.1 / induced in stationary phase, recognized by rpoS, affects cell division
hyaB / 864 / 4 / 196.7 / hydrogenase-1 large subunit
phnB / 3915 / 4 / 919.4 / hypothetical protein
sufS / 1851 / 4 / 420.3 / selenocysteinelyase, PLP-dependent
yagQ / 628 / 4 / 139 / hypothetical protein
ybaA / 1855 / 4 / 364.2 / hypothetical protein
ybdK / 552 / 4 / 152.4 / hypothetical protein
yciF / 7047 / 4 / 1667.7 / putative structural proteins
yfcG / 1902 / 4 / 424 / putative S-transferase
yhcO / 1970 / 4 / 517.6 / hypothetical protein
ymgE / 324 / 4 / 105.9 / transglycosylaseasociated protein
narZ / 893 / 4 / 204.5 / cryptic nitrate reductase 2, alpha subunit
yajO / 1558 / 4 / 382.6 / putative NAD(P)H-dependent xylosereductase
Z1157 / 258 / 4 / 60.6 / unknown function
Z1922 / 7087 / 4 / 1981.1 / unknown protein encoded by prophage CP-933X
Z3090 / 328 / 4 / 90.2 / unknown protein encoded within prophage CP-933U
b1152 / 55 / 4 / 11.7 / hypothetical protein
b1490 / 1468 / 4 / 373.6 / hypothetical protein
b1668 / 1040 / 4 / 191.3 / hypothetical protein
b2659 / 69 / 4 / 18.4 / hypothetical protein
glpD / 1882 / 4 / 471.3 / sn-glycerol-3-phosphate dehydrogenase (aerobic)
malG / 1987 / 4 / 497.6 / part of maltose permease, inner membrane
narV / 650 / 4 / 151.3 / cryptic nitrate reductase 2 gamma subunit
narY / 942 / 4 / 204.8 / cryptic nitrate reductase 2 beta subunit
sodC / 4865 / 4 / 1042.3 / superoxide dismutase precursor (Cu-Zn)
ybdR / 2295 / 4 / 567.2 / putative oxidoreductase
ydeJ / 987 / 4 / 227.1 / hypothetical protein
yeeU / 256 / 4 / 54.8 / putative structural protein
yncB / 1715 / 4 / 435.9 / putative oxidoreductase
yohF / 749 / 4 / 221.1 / putative oxidoreductase
ydjE / 44 / 4 / 12.6 / putative transport protein
yhcI / 176 / 4 / 41.8 / putative NAGC-like transcriptional regulator
yhhT / 553 / 4 / 185.1 / hypothetical protein
Z1122 / 168 / 4 / 34.2 / unknown function
Z1130 / 286 / 4 / 79.6 / unknown function
Z1179 / 190 / 4 / 40.6 / unknown function
Z1191 / 227 / 4 / 45.6 / unknown function
Z1225 / 531 / 4 / 117.4 / unknown function
Z1504 / 1263 / 4 / 272.6 / amino terminal fragment of WrbA
Z3089 / 533 / 4 / 129.5 / putative tail fiber component Z of prophage CP-933U
Z3091 / 235 / 4 / 55.6 / unknown protein encoded within prophage CP-933U
Z3345 / 61 / 4 / 14.6 / putative antitermination protein Q for prophage CP-933V
b1045 / 2139 / 4 / 532.9 / putative polyprotein
b1679 / 781 / 4 / 203.9 / hypothetical protein
b2080 / 4167 / 4 / 1065.8 / hypothetical protein
b2999 / 1455 / 4 / 375.7 / hypothetical protein
b3100 / 2390 / 4 / 736.4 / hypothetical protein
hyaC / 813 / 4 / 174 / probable NiFe-hydrogenase 1 b-type cytochrome subunit
otsB / 3177 / 4 / 893.5 / trehalose-6-phosphate phophatase, biosynthetic
yagR / 877 / 4 / 230 / hypothetical protein
ybaY / 3943 / 4 / 896.6 / glycoproteinpolysaccharide metabolism
ybhP / 2275 / 4 / 616.9 / hypothetical protein
yliI / 994 / 4 / 311.4 / putative dehydrogenase
poxB / 4512 / 3 / 1259.7 / pyruvateoxidase
ybiO / 326 / 3 / 120.9 / putative transport protein
yqjG / 913 / 3 / 299.8 / putative transferase
Z1156 / 209 / 3 / 52.7 / unknown function
Z1182 / 24 / 3 / 7 / unknown function
Z1188 / 387 / 3 / 102.4 / unknown function
Z1207 / 373 / 3 / 95.8 / partial transposase
Z1785 / 111 / 3 / 36 / putative endodeoxyribonuclease of prophage CP-933N
Z3088 / 486 / 3 / 132.2 / putative tail fiber component U of prophage CP-933U
b1519 / 3213 / 3 / 934 / hypothetical protein
b2086 / 2071 / 3 / 532.5 / hypothetical protein
b3000 / 1229 / 3 / 354.4 / hypothetical protein
blc / 2263 / 3 / 667.4 / outer membrane lipoprotein (lipocalin)
hyaD / 736 / 3 / 213.3 / processing of HyaA and HyaB proteins
malF / 4458 / 3 / 1190.4 / part of maltose permease, periplasmic
ybeM / 1244 / 3 / 293.3 / putative amidase
ycaP / 1890 / 3 / 587 / hypothetical protein
yccD / 2861 / 3 / 809.6 / hypothetical protein
ycdF / 3291 / 3 / 357.3 / hypothetical protein
ycgB / 2763 / 3 / 796 / putative sporulation protein
yeaQ / 2586 / 3 / 625.6 / hypothetical protein
yeaR / 909 / 3 / 266.9 / hypothetical protein
yehX / 1606 / 3 / 435.7 / putative ATP-binding component of a transport system
ldcC / 1048 / 3 / 363.9 / lysine decarboxylase 2, constitutive
ycjU / 24 / 3 / 4.3 / putative beta-phosphoglucomutase
Z1038 / 154 / 3 / 54.7 / hypothetical protein
Z1135 / 358 / 3 / 116.8 / putative complement resistance protein
Z1138 / 189 / 3 / 78.1 / unknown function
Z1431 / 263 / 3 / 99.2 / unknown protein encoded by bacteriophage BP-933W
Z2052 / 61 / 3 / 19.2 / unknown protein encoded by prophage CP-933O
Z4227 / 384 / 3 / 122.7 / putative enzyme
b1836 / 5896 / 3 / 2316.4 / hypothetical protein
b2879 / 32 / 3 / 11.4 / putative proteoglycan
hyaE / 480 / 3 / 126 / processing of HyaA and HyaB proteins
hyaF / 295 / 3 / 96.6 / nickel incorporation into hydrogenase-1 proteins
psiF / 2898 / 3 / 888 / induced by phosphate starvation
treF / 856 / 3 / 239.7 / cytoplasmictrehalase
wza / 215 / 3 / 71.8 / putative polysaccharide export protein
ybgA / 3599 / 3 / 1115.9 / hypothetical protein
ybiM / 1053 / 3 / 342.8 / hypothetical protein
yedK / 982 / 3 / 302 / hypothetical protein
yeeT / 555 / 3 / 152 / hypothetical protein
yfcF / 1433 / 3 / 421 / hypothetical protein
yfdC / 580 / 3 / 180.9 / putative transport protein
yhbW / 1136 / 3 / 328.3 / putative enzyme
yhiV / 3420 / 3 / 1056.8 / putative transport system permease protein
yhjY / 2046 / 3 / 630.3 / putative lipase
ykgC / 1335 / 3 / 441.5 / putative oxidoreductase
yphA / 1252 / 3 / 385.8 / hypothetical protein
ytfE / 1234 / 3 / 335.3 / hypothetical protein
phrB / 1885 / 3 / 719.7 / deoxyribodipyrimidinephotolyase (photoreactivation)
Z0244 / 152 / 3 / 52.6 / unknown function
Z0374 / 163 / 3 / 73.6 / unknown function
Z0655 / 237 / 3 / 70.9 / unknown function
Z1128 / 263 / 3 / 73.1 / unknown function
Z1158 / 384 / 3 / 118 / unknown in ISEc8
Z1159 / 355 / 3 / 96.7 / unknown in ISEc8
Z1352 / 655 / 3 / 189.6 / putative endolysin of cryptic prophage CP-933M
Z1449 / 1229 / 3 / 487.8 / putative regulatory protein CII of bacteriophage BP-933W
Z1916 / 297 / 3 / 101 / putative tail protein (partial) of prophage CP-933X
Z1917 / 461 / 3 / 121.4 / putative outer membrane protein of prophage CP-933X
Z2296 / 788 / 3 / 214.1 / unknown function
Z3336 / 1473 / 3 / 498 / putative endopeptidaseRz for prophage CP-933V
Z3942 / 285 / 3 / 90.7 / unknown function
Z3945 / 133 / 3 / 41.2 / unknown function
Z3974 / 398 / 3 / 166.4 / unknown function
ada / 500 / 3 / 166.6 / O6-methylguanine-DNA methyltransferase
alkB / 646 / 3 / 218.9 / DNA repair system specific for alkylated DNA
b1442 / 633 / 3 / 212 / putative transport system permease protein
b1518 / 2917 / 3 / 967 / hypothetical protein
b1815 / 409 / 3 / 133.2 / hypothetical protein
b3023 / 1818 / 3 / 625.7 / hypothetical protein
b3975 / 50 / 3 / 14 / hypothetical protein
chaB / 3380 / 3 / 996.3 / cation transport regulator
fhlA / 926 / 3 / 239.5 / formate hydrogen-lyase transcriptional activator for fdhF
insB / 38 / 3 / 13.9 / IS1 protein InsB
malK / 3761 / 3 / 1316.4 / ATP-binding component of transport system for maltose
ryjA / 3269 / 3 / 1119 / SEG=NC_000913:-4275506,4275645 LEN=139
ybaT / 3048 / 3 / 1082.1 / putative amino acidamine transport protein
ybbY / 244 / 3 / 74.2 / putative transport
ybeH / 1973 / 3 / 654.8 / hypothetical protein
ybhN / 511 / 3 / 178.1 / hypothetical protein
yehW / 671 / 3 / 228.3 / putative transport system permease protein
yehY / 25 / 3 / 9.3 / putative transport system permease protein
yfiL / 719 / 3 / 221.8 / hypothetical protein
ygaU / 3563 / 3 / 1077.2 / hypothetical protein
yhiF / 2971 / 3 / 1024.8 / hypothetical protein
ynhG / 2244 / 3 / 738.3 / hypothetical protein
galP / 212 / 3 / 72.8 / galactose-proton symport of transport system
kdpA / 168 / 3 / 60.5 / ATPase of high-affinity potassium transport system, A chain
tktB / 4846 / 3 / 1957.1 / transketolase 2 isozyme
treA / 551 / 3 / 199.8 / trehalase, periplasmic
yehY / 653 / 3 / 317.7 / putative transport system permease protein
ygaM / 5183 / 3 / 1753.3 / hypothetical protein
Z0343 / 292 / 3 / 117.3 / putative oxidoreductase
Z1137 / 167 / 3 / 68 / unknown function
Z1189 / 207 / 3 / 89.5 / unknown function
Z1220 / 234 / 3 / 56.5 / putative structural protein
Z2473 / 96 / 3 / 31.5 / partial putative periplasmic transport protein
Z3531 / 151 / 3 / 57 / Unknown function
Z5415 / 114 / 3 / 35.2 / unknown function
Z5904 / 86 / 3 / 30.8 / unknown function
Z6011 / 78 / 3 / 16.8 / hypothetical protein
b1440 / 2060 / 3 / 606.3 / putative transport protein
b1441 / 736 / 3 / 260.3 / putative ATP-binding component of a transport system
b2655 / 180 / 3 / 65 / hypothetical protein
b2666 / 4495 / 3 / 1430 / hypothetical protein
b3004 / 131 / 3 / 46 / hypothetical protein
crcA / 498 / 3 / 165.8 / hypothetical protein
ecnB / 5005 / 3 / 1931.2 / entericidin B
fhuA / 564 / 3 / 237.6 / outer membrane protein receptor for ferrichrome
rhsE / 356 / 3 / 143 / RhsE
talA / 4052 / 3 / 1270.1 / transaldolase A
yahK / 3470 / 3 / 1348.5 / putative oxidoreductase
ydbK / 2655 / 3 / 698 / putative oxidoreductase, Fe-S subunit
ygaE / 1225 / 3 / 417.4 / putative transcriptional regulator
yjiN / 894 / 3 / 321.8 / hypothetical protein
yoaG / 316 / 3 / 109.5 / hypothetical protein
napA / 1598 / 3 / 603.3 / probable nitrate reductase 3
wcaK / 236 / 3 / 88 / putativegalactokinase (EC 2.7.1.6).
yehZ / 3354 / 3 / 1142.1 / putative transport system permease protein
ylcC / 98 / 3 / 34 / hypothetical protein
yqjE / 4241 / 3 / 1485 / Unknown function
Z0251 / 155 / 3 / 54 / unknown function
Z0964 / 120 / 3 / 44.4 / putative DNA packaging protein of prophage CP-933K
Z1184 / 280 / 3 / 103.8 / unknown function
Z1212 / 830 / 3 / 291 / unknown
Z1363 / 594 / 3 / 205.3 / unknown protein encoded by cryptic prophage CP-933M
Z1528 / 1084 / 3 / 380 / unknown function
Z1535 / 997 / 3 / 406.4 / unknown function
Z2263 / 168 / 3 / 72.7 / unknown protein associated with Rhs element
Z2297 / 2574 / 3 / 970.9 / unknown function
Z3025 / 315 / 3 / 112.9 / unknown function
Z3617 / 103 / 3 / 45.1 / unknown function
Z4787 / 164 / 3 / 68.7 / unknown function
Z5001 / 231 / 3 / 66.7 / putative permease
amyA / 4242 / 3 / 1570.2 / cytoplasmic alpha-amylase
b0941 / 38 / 3 / 16.9 / FimH-like protein
b1971 / 955 / 3 / 372.7 / putative reductase
cbpA / 4277 / 3 / 1804 / curved DNA-binding protein; functions closely related to DnaJ
chaC / 3558 / 3 / 1373.7 / cation transport regulator
dbpA / 1136 / 3 / 482.2 / ATP-dependent RNA helicase
dsrB / 1073 / 3 / 501.4 / hypothetical protein
elaB / 5902 / 3 / 2591.4 / hypothetical protein
katE / 5080 / 3 / 1888.1 / catalase; hydroperoxidaseHPII(III)
torD / 182 / 3 / 78.5 / part of trimethylamine-N-oxide oxidoreductase
ydeZ / 709 / 3 / 240 / putative transport system permease protein
yhhA / 1117 / 3 / 357.8 / hypothetical protein
yhiU / 4303 / 3 / 1654.4 / putative membrane protein
yhjD / 1711 / 3 / 656.1 / hypothetical protein
ynfM / 696 / 3 / 307.3 / putative transport protein
ytfR / 900 / 3 / 307.2 / putative ATP-binding component of a transport system
ytfS / 701 / 3 / 323.4 / putative ATP-binding component of a transport system
Supplemental table 2.Genes repressedmore than 3-fold for planktonic cells of EDL933 vs. 86-24. Cellswere grown inLB mediumat 37oCto a turbidity of 4.0.
Gene / EDL933signal / Fold
change / 86-24
signal / Descriptions
Z2968 / 0.4 / -5405 / 2596 / unknown protein encoded by prophage CP-933T
Z2969 / 1.6 / -1261 / 2909 / unknown protein encoded by prophage CP-933T
Z2994 / 1.4 / -315 / 658 / unknown protein encoded by prophage CP-933T
coxT / 1.5 / -169 / 263 / putative regulator for prophage CP-933T
Z2967 / 13.9 / -128 / 1518 / unknown protein encoded by prophage CP-933T
intT / 5.5 / -91 / 692 / integrase for prophage CP-933T
Z2976 / 0.4 / -79 / 161 / unknown protein encoded by prophage CP-933T
Z2984 / 9.4 / -74 / 912 / putative serine acetlyltransferase of prophage CP-933T
Z2973 / 2.6 / -64 / 176 / unknown protein encoded by prophage CP-933T
intB / 8.2 / -45 / 648 / prophageP4integrase
Z2990 / 8.1 / -39 / 270 / putative tail fiber component of prophage CP-933T
Z2991 / 5 / -39 / 182 / putative tail sheath protein of prophage CP-933T
Z2986 / 2.9 / -37 / 136 / putative tail fiber protein of prophage CP-933T
yabP / 0.1 / -37 / 6 / hypothetical protein
Z2987 / 2 / -34 / 93 / putative tail fiber component of prophage CP-933T
Z2992 / 1 / -34 / 73 / putative tail assembly protein of prophage CP-933T
nlpA / 0.5 / -28 / 17 / lipoprotein-28
Z2974 / 8.6 / -23 / 242 / unknown protein encoded by prophage CP-933T
b1565 / 0.6 / -23 / 15 / hypothetical protein
Z2980 / 2.5 / -17 / 58 / putative stabilitypartitioning protein encoded within CP-933T
trpE / 150.2 / -15 / 1939 / anthranilatesynthase component I (EC 4.1.3.27)
Z2983 / 5.1 / -15 / 88 / putative tail fiber assembly protein of prophage CP-933T
mtr / 300.4 / -13 / 3652 / tryptophan-specific transport protein
trpD / 112.8 / -12 / 1337 / anthranilatesynthase component II
Z2979 / 4.9 / -12 / 174 / putative stabilitypartitioning protein encoded within prophage CP-933T
Z2989 / 18.9 / -11 / 352 / unknown protein encoded by prophage CP-933T
trpL / 199 / -11 / 1861 / trpoperon leader peptide
Z2988 / 18.2 / -9 / 222 / putative tail fiber protein component of prophage CP-933T
dxs / 5.3 / -9 / 36 / 1-deoxyxylulose-5-phosphate synthase; flavoprotein
Z2971 / 18.1 / -8 / 243 / unknown protein encoded by prophage CP-933T
Z2972 / 16.7 / -8 / 135 / unknown protein encoded by prophage CP-933T
Z3271 / 476 / -8 / 3642 / unknown function
Z2977 / 16.7 / -7 / 131 / unknown protein encoded by prophage CP-933T
yjgX / 0.9 / -7 / 12 / hypothetical protein
Z5111 / 362 / -6 / 2447 / unknown function
Z5102 / 241.7 / -6 / 1313 / unknown function
Z0955 / 465.9 / -5 / 2322 / unknown protein encoded by prophage CP-933K
b1191 / 3 / -5 / 15 / hypothetical protein
escF / 220.1 / -5 / 1199 / pathogenesis in LEE genes
sepL / 405.3 / -5 / 2048 / unknown function in LEE genes
Z3272 / 364.9 / -5 / 2009 / unknown function
trpC / 583 / -5 / 2865 / indole-3-gylcerolphosphatesynthetase
Z5136 / 426.5 / -5 / 1958 / unknown function
trpB / 648.6 / -5 / 2795 / tryptophan synthase, beta protein
cesD / 369.8 / -4 / 1307 / response to stress in LEE genes
eae / 810.3 / -4 / 3371 / intimin adherence protein
Z5137 / 811.5 / -4 / 3339 / unknown function
proW / 352.7 / -4 / 1360 / high-affinity transport system for glycinebetaine and proline
proX / 794.8 / -4 / 3238 / high-affinity transport system for glycinebetaine and proline
btuB / 320.7 / -4 / 1349 / bacteriophageBF23
escC / 327 / -4 / 1261 / transport protein
speF / 134.1 / -4 / 529 / ornithinedecarboxylaseisozyme, inducible
Z2985 / 29.9 / -4 / 111 / putative tail fiber protein of prophage CP-933T
ansB / 417.4 / -4 / 1244 / periplasmic L-asparaginase II
yeiN / 203.2 / -4 / 755 / hypothetical protein
escJ / 351.7 / -4 / 1314 / type III protein (virulence-related) secretor activity
escR / 324 / -4 / 1099 / type III protein (virulence-related) secretor activity
espA / 1602.1 / -4 / 5866 / secreted protein EspA
Z2975 / 11.9 / -4 / 65 / unknown protein encoded by prophage CP-933T
Z5129 / 472.9 / -4 / 1556 / unknown function
Z5138 / 1148.9 / -4 / 3939 / unknown function
trpA / 799.8 / -4 / 2299 / tryptophan synthase, alpha protein
espD / 1370.1 / -3 / 4810 / secreted protein EspD
tir / 570.2 / -3 / 2377 / putative translocatedintimin receptor protein
Z2978 / 33.3 / -3 / 84 / putative replication protein for prophage CP-933T
Z5104 / 535.5 / -3 / 1947 / unknown function
Z5123 / 282 / -3 / 1000 / unknown function
aroL / 450.7 / -3 / 1349 / shikimatekinase II
Z3071 / 420 / -3 / 1322 / unknown protein encoded within prophage CP-933U
Z5113 / 455.1 / -3 / 1495 / unknown function
Z5125 / 561.2 / -3 / 1638 / unknown function
b1498 / 1121.9 / -3 / 3595 / putative sulfatase
fimB / 344.7 / -3 / 1521 / recombinase involved in phase variation; regulator for fimA
galS / 477.6 / -3 / 1801 / mgl repressor, galactoseoperon inducer
proV / 596.5 / -3 / 1982 / ATP-binding component of transport system for glycine
escT / 213.2 / -3 / 876 / protein targeting in LEE genes
espF / 632.9 / -3 / 2002 / unknown function in LEE genes
guaB / 883.9 / -3 / 2531 / IMP dehydrogenase
Z1829 / 567.8 / -3 / 1621 / unknown function
Z2075 / 228.3 / -3 / 860 / unknown protein encoded by prophage CP-933O
Z3920 / 344.8 / -3 / 1029 / unknown function
Z5128 / 301.1 / -3 / 852 / unknown function
Z5139 / 1530.4 / -3 / 4668 / unknown function
Z5140 / 1905.8 / -3 / 5202 / unknown function
yeiC / 302.4 / -3 / 863 / putative kinase
escS / 330.9 / -3 / 911 / transport protein in LEE genes
Z1930 / 1452.5 / -3 / 4355 / putative protease encoded within prophage CP-933X
Z2201 / 700.6 / -3 / 1750 / putative fimbrial chaperone protein
aphA / 720 / -3 / 1848 / diadenosinetetraphosphatase
b0651 / 638.1 / -3 / 1649 / putative tRNAsynthetase
b1504 / 180.9 / -3 / 506 / putative fimbrial-like protein
oppB / 1559 / -3 / 4431 / oligopeptide transport permease protein
yccC / 544.3 / -3 / 1038 / hypothetical protein
yccZ / 802 / -3 / 2207 / putative function in exopolysaccharide production
yeaV / 241.2 / -3 / 634 / putative transport protein
yhaL / 874.5 / -3 / 2588 / hypothetical protein
ymcC / 677 / -3 / 1790 / putative regulator
espB / 1502 / -3 / 4014 / secreted protein EspB
glpT / 123.8 / -3 / 347 / sn-glycerol-3-phosphate permease
hisL / 1169.1 / -3 / 3163 / his operon leader peptide
sepZ / 991.8 / -3 / 2448 / translocatedeffector protein
Z1787 / 505.6 / -3 / 1369 / unknown protein encoded by prophage CP-933N
Z1822 / 224.6 / -3 / 513 / unknown protein encoded by prophage CP-933N
Z4971 / 171 / -3 / 505 / putative major fimbrial subunit
Z5117 / 187.7 / -3 / 472 / unknown function
b1505 / 266.2 / -3 / 597 / putative outer membrane protein
chaA / 449.8 / -3 / 1071 / sodium-calciumprotonantiporter
cpdB / 1057 / -3 / 2861 / 2:3-cyclic-nucleotide 2-phosphodiesterase
hisL / 360 / -3 / 911 / his operon leader peptide
yccY / 1018.8 / -3 / 2716 / putative phosphatase
ydeH / 753.7 / -3 / 2076 / hypothetical protein
yecI / 869 / -3 / 2338 / ferritin-like protein
yiaD / 304.2 / -3 / 880 / putative outer membrane protein
yjdB / 227.7 / -3 / 598 / hypothetical protein
yqgB / 561.7 / -3 / 1488 / hypothetical protein