Supp. Genera Table 4 Bacterial Genera Retrieved from the Edgemont and North Cave Hills

Supp. genera Table 4 Bacterial genera retrieved from the Edgemont and North Cave Hills sites on the PhyloChips

Sr. No / Nearest database neighbor to OTUs captured on PhyloChips / Accession number / Edgemont site / NCH site
Environmental_clone_wchb1-31_group clone SJA-108 / AJ306793 / + / -
Chlorobium_group Chlorobi clone Cart-N2 / AY118151 / + / -
Brevibacillus brevis_group Brevibacillus sp. MN 47.2a isolate MN 47.2a / AJ313027 / + / -
Rhodocyclus tenuis_subgroup SA34 / AF245349 / + / +
A.ferrooxidans_subgroup firmicute clone AEGEAN_247 / AF406548 / + / -
Aquaspirillum arcticum / AB074523 / + / +
Thermodesulfobacterium hydrogeniphilum / AF411013 / + / +
Deinococcus_group clone RCP1-75 / + / +
Rhf.fermentans_subgroup clone T67 / + / -
Ochrosphaera neapolitana / X82156 / + / +
Clostridium thermolacticum_subgroup feedlot manure B82 / + / +
Clostridium propionicum_subgroup clone:Rs-G77 / AB088994 / + / +
Nss.multiformis_subgroup / + / -
Symbiobacterium toebii / AF190460 / + / -
Brachybacterium nesterenkovii / X91033 / + / +
Actinomadura echinospora / AJ293710 / + / +
Environmental_clone_wchd3-88 Candidatus Xiphinematobacter brevicolli / AF217462 / + / +
Atp.minutum_subgroup actinobacterium clone S15A-MN100 / AJ534681 / + / +
Cy.aurantiaca_group CFB group clone SM1C04 / AF445661 / + / +
Cy.uliginosa_subgroup Cellulophaga sp. E14 / AF539756 / + / +
Desulfobulbus_assemblage clone RCP1-85 / AF523883 / + / +
Ps.tolaasii_subgroup GR-296.II.89 clone GR-296.II.89 / AJ296549 / + / +
C.subterminale_subgroup Clostridium PENDANT-16 / + / -
C.cochlearium_subgroup clone RC30 / AB185532 / + / +
Cellulomonas cellulans / X79453 / + / +
Clostridium aminobutyricum_subgroup clone:Rs-N82 / AB088960 / + / +
Tonsillophilus suis / AB096085 / + / -
A.ferrooxidans_subgroup Acidimicrobium sp. Y0018 / + / +
Kineococcus aurantiacus c3 / X77958 / + / +
Clostridium leptum_subgroup Clostridiaceae clone:Rs-Q01 / AB089008 / + / +
Environmental_clone_wchb1-41_subgroup Verrucomicrobia clone LD1-PB20 / AY114334 / + / +
Environmental_clone_s027_group 17F9 / AF245036 / + / +
Emb.brevis_subgroup Bacteroidetes clone 1G12 / AY274839 / + / +
Thermophilic_oxygen_reducers clone env.OPS 14 / AF528192 / + / +
Rcy.tenuis_subgroup Agricultural soil clone SC-I-71 / AJ252651 / + / +
Thermovibrio ammonificans / AY263403 / + / +
Cor.afermentans_subgroup Corynebacterium Corynebacterium sp. MTcory24T. / + / +
Arb.globiformis_subgroup Arthrobacter sp. Kaza-36 / AF441731 / + / +
Vulcanithermus medioatlanticus / AJ507298 / + / +
Dsf.limicola_subgroup delta clone SLM-DSBAC-75 / + / +
Streptococcus gordonii / AF003931 / + / +
Mch.purpuratum_subgroup Thiococcus sp. AT2205 / + / -
Environmental_clone_ocs307_group clone ZA3648c / AF382142 / + / +
C.lituseburense from anoxic bulk soil clone BSV76 / + / -
Carsonella ruddii c6 / + / +
Environmental_clone_wchb1-41_subgroup Verrucomicrobia clone ML1228J2 / AF454310 / + / +
Environmental_clone_opb80_group OP10 clone SBRA309 / AF368184 / + / +
Aquaspirillum serpens / AB074518 / + / +
Azs.lipoferum_subgroup clone FW51 / + / +
Achromobacter xylosoxidans / AJ278451 / + / +
Peb.acetylenicus_subgroup clone Bol11 / AY193132 / + / +
Carsonella ruddii c12 / + / +
Com.terrigena_subgroup beta clone BIfdi44 / AJ318129 / + / +
Spg.pruni_subgroup clone a13104 / AY785128 / + / +
Rpl.globiformis_subgroup clone B35 / AF407720 / + / +
Nocardiopsis compostus / AF178988 / + / +
Nitrospina_group GR-296.I.52 clone GR-296.I.52 / AJ296568 / + / +
Cy.fermentans_subgroup clone KD1-125 / AY218551 / + / +
Geobater metallireducens_subgroup clone FW110 / AF523965 / + / +
Streptosporangium vulgare / X89947 / + / +
Dg.zoogloeoides_subgroup_ii Zoogloea sp. str. DhA-35 / + / +
Helicobacter cetorum / AF292378 / + / +
Acbt.capsulatum_group DA038 / AF200698 / + / +
Kozakia baliensis / AJ012698 / + / +
Eub.cylindroides_subgroup low G+C Gram-positive clone ccslm238 / AY133091 / + / +
C.thermolacticum_subgroup low G+C Gram-positive clone ML635J-21 / AF507892 / + / +
Rik.microfusus_subgroup Bacteroidaceae clone:Rs-D38 / AB088925 / + / +
Azs.lipoferum_subgroup alpha clone JG37-AG-20 / AJ518774 / + / +
Janibacter like / AJ244674 / + / -
Rhv.sulfidophilum_subgroup clone TK03 / AJ347025 / + / +
Cytophaga_group_ii Bacteroidetes clone ML635J-1 / AF507860 / + / +
Environmental_clone_wchb1-41_subgroup verrucomicrobium DEV045 / AJ401113 / + / +
Cy.fermentans_subgroup Bacteroidetes clone ML635J-40 / AF507859 / + / +
Environmental_clone_rb25_group Gram-positive isolate 5G01 / AY177763 / + / -
Dbb.propionicus_assemblage delta clone Hyd89-51 / AJ535252 / + / +
Beg.alba_subgroup Beggiatoa sp. MS-81-1c / AF110276 / + / +
Geobacter metallireducens_subgroup clone G13 / AF407700 / + / -
Geobacter metallireducens_subgroup delta clone FTLM111 / + / +
Aeromicrobium marinum / AY166703 / + / +
Environmental_clone_sar202_subgroup Chloroflexi clone FTL276 / AF529110 / - / +
Aab.hydrogenoformans_subgroup Clostridiaceae clone:Rs-F76 / AB089010 / - / +
Moorella_group low G+C Gram-positive clone ML623J-19 / AF507879 / - / +
Dh.ethenogenes_subgroup clone FW60 / AF524015 / - / +
Chloroflexus_assemblage Chloroflexaceae group clone P6-D01 / - / +
Polaromonas vacuolata / U14585 / - / +
Acaryochloris marina / AY163573 / - / +
Frankia_subgroup #0425-2M17 / AF234118 / - / +
Nss.multiformis_subgroup beta clone Spb253 / - / +
Weissella koreensis / AY035892 / - / +
Actinomyces odontolyticus / AJ234041 / - / +
Chloroflexus_assemblage clone FBP471 / AY250886 / + / +
Lpp.ferrooxidans_subgroup clone JG34-KF-252 / AJ532725 / + / +
Environmental_clone_wchb1-41_subgroup a2b018 / AF419674 / + / +
Environmental_clone_opb2_group clone GOUTB15 / AY050598 / + / +
Environmental_clone_osk_group Ferribacter thermoautotrophicus cloneKA2b / AF282254 / + / +
Environmental_clone_opb5_group clone KD1-1 / AY218548 / + / +
Environmental_clone_s027_group clone 2951. / AF097766 / + / +
Cy.fermentans_subgroup from anoxic bulk soil clone BSV13 / AJ229217 / + / +
Persicobacter_group CFB group clone ML513M-12 / AF449785 / + / +
Microscilla arenaria / AB078078 / + / +
Flexibacter flexilis / AB078054 / + / +
Pirellula_schlesner_isolates planctomycete clone CY0ARA055B12 / + / +
Pln.maris_subgroup planctomycete clone CY0ARA032C05 / BX294756 / + / +
Oscillatoria sancta / AB039015 / + / +
Anabaena circinalis c2 / AJ781148 / + / +
Phormidium_group "Plectonema F3" str. F3 / AF091110 / + / +
Mitrastema yamamotoi / U67742 / + / +
Mount_coot-tha_environmental_clones_iii Holophaga sp. clone JG37-AG-74 / AF529104 / + / +
Acbt.capsulatum_group Holophaga sp. clone Sh765B-AG-82 / + / +
Acbt.capsulatum_group Acidobacterium group clone CLi114 / AF529322 / + / +
Leptospira weilii / NC005823 / + / +
Mag.gryphiswaldense_subgroup K-5b5 / AF524861 / + / +
Azorhizobium caulinodans / D11342 / + / +
Afipia.felis_subgroup alpha clone BIfci45 / + / +
Mso.loti_subgroup alpha MB13F01 ; tRNA-Ile and tRNA-Ala genes ; and 23S / AY033325 / + / +
Ahrensia kielensis / D88524 / + / +
Mycoplana dimorpha / D12786 / + / +
Rickettsia conorii / U11021 / + / +
Rickettsia_subgroup alpha clone:Rs-M62 / AB089097 / + / +
Sphingomonas asaccharolytica c2 / Y09639 / + / +
Com.terrigena_subgroup TM7 phylum sp. oral clone EW086 / AY134895 / + / +
Mch.purpuratum_subgroup gamma clone JG37-AG-14 / AJ518784 / + / +
Methylophaga buryatica / AF384373 / + / +
Lyb.antibioticus_subgroup BD clone BDfull1 / AF432648 / + / +
Mrb.hydrocarbonoclasticus_group Marine arctic deep-sea HG11 / AJ557849 / + / +
Desulfonauticus submarinus / AF524933 / + / +
Desulfobulbus_assemblage clone SHD-1 / AJ306805 / + / +
Frankia_subgroup Frankia sp. Sn5-8 isolate Sn5-8 / AJ408875 / + / +
Streptomyces tumescens / AB026214 / + / +
Pseudonocardia halophobica / + / +
Mycobacterium xenopi / AJ243481 / + / +
Gordonia polyisoprenivorans / AF416719 / + / +
Dfm.geothermicum_group clone 1026B236 / + / +
Moorella_group clone JG30-KF-A11 / AJ536867 / + / +
Spm.paucivorans_subgroup from anoxic bulk soil clone BSV43 / AJ229198 / + / +
B.stearothermophilus_subgroup Thermoactinomyces sp. 700375 / AB088361 / + / +
Tetragenococcus muriaticus / D88824 / + / +
Pirellula_schlesner_isolates clone HT2F11 / AF418968 / + / +
Peb.acetylenicus_subgroup Verrucomicrobia clone ML635J-58 / AF507900 / + / +
Blt.sp_subgroup Blattabacterium sp. c4 / Z35664 / + / +
Bl.viridis_assemblage Ellin362 / AF498744 / + / +
Crn.divergens_subgroup clone cvf56045 / + / +
Environmental_clone_opb5_group Termite group 1 clone:Rs-D43 / AB089050 / - / +
Brevibacterium casei / X83813 / - / +
Environmental_clone_t78_group SHD-71 / AJ278167 / - / +
Dss.variabilis_subgroup clone PCEDR694 / - / +
Pseudanabaena_group Synechococcus sp. PCC 7502 / AF448080 / - / +
Pal.haloplanktis_subgroup Pseudoalteromonas sp. / AF218245 / - / +
Arhodomonas_and_nitrococcus_group gamma clone ML110J-5 / AF452603 / - / +
Prosthecobacter dejongeii / U60012 / + / +
Sphingobacterium_group clone Glu58 / AF409002 / + / +
Euglena_subgroup clone FW124 / + / +
Environmental_clone_opb45_group soil clone S079 / + / +
Flx.sancti_subgroup Agricultural soil clone SC-I-12 / AJ252615 / + / +
Devosia neptuniae / AF469072 / + / +
Spg.sp_str_un1f1_subgroup Sphingomonas sp. ML1 / AY026948 / + / +
Spg.pruni_subgroup alpha clone SM2B06 / AF445712 / + / +
Pseudomonas woodsii / AB021422 / + / +
Catenuloplanes japonicus / D14642 / + / +
Mms.echinospora_subgroup Actinoplanes sp. IM-4188 / + / +
B.pseudomegaterium_subgroup clone P3IB-17 / + / +
B.thermocloacae compost 4-28 / AB034710 / + / +
Spg.subarctica_subgroup clone 1958 / AF097802 / + / +
Flx.sancti_subgroup unnamed organism. c2 / + / +
Flx.sancti_subgroup Agricultural soil clone SC-I-91 / + / +
Flx.sancti_subgroup clone cvf122192 / + / +
Afipia clevelandensis / M69186 / + / +
Srh.fredii_subgroup oxSCC-1 / AB159685 / + / +
Spg.pruni_subgroup Sphingomonas sp. SIA181-1A1 / AF395032 / - / +
Rb.sphaeroides_subgroup Alpha 'ANG clone 1b' / - / +
Catellatospora citrea / AF152106 / - / +
Prv.nigrescens_subgroup Prevotella sp. oral clone DO027 / AF385511 / - / +
Bacillus psychrophilus / X68415 / - / +
Spg.pruni_subgroup WD286 clone WD286 / AJ292605 / - / +
Hongia koreensis / AY253862 / - / +
Myb.tuberculosis_subgroup Mycobacterium PENDANT-38. / - / +
Environmental_clone_da101_subgroup Verrucomicrobia EV116 / - / +
Actinoplanes globisporus / AB037003 / - / +
Flx.sancti_subgroup Rhizosphere soil clone RSC-II-81 / - / +
A.ferrooxidans_subgroup ARFS-2 / - / +
Friedmanniella capsulatus / AJ132943 / - / +
B.thermocloacae clone p-2330-s962-2 / AF349724 / - / +
Nss.multiformis_subgroup Methylophilus sp. clone GOBB3-CL297 / - / +
Xan.campestris_subgroup Rhizosphere soil clone RSC-II-42 / - / +
Anr.thermoterrenum_group clone SHA-1 / AJ306782 / + / +
Environmental_clone_opb5_group OP2 clone OPB25 / AF027097 / + / +
Environmental_clone_mb1228_group clone BA059 / AF323775 / + / +
Environmental_clone_wchb1-31_group clone SM1D10 / AF445676 / + / +
Prc.marinus_group clone TK09 / AJ347056 / + / +
Azs.lipoferum_subgroup alpha clone ASL45 / AF533506 / + / +
Rickettsia_subgroup clone Hw124 / + / +
Rickettsia_subgroup alpha clone:Rs-B60 / AB089084 / + / +
Rhz.suberifaciens_subgroup delta Arctic95C-5 / AF355039 / + / +
Dichelobacter_group clone CCD9 / AY221039 / + / +
Mlc.capsulatus_subgroup clone T5-3 rrn / AF526927 / + / +
Alcanivorax_and_fundibacter_group Alcanivorax sp. K3-3 / AB055205 / + / +
Myx.xanthus_subgroup clone a13134 / AY102330 / + / +
Pol.cellulosum_subgroup clone ZA3704c / AF382126 / + / +
Stm.mashuensis_subgroup clone JG30-KF-A23 / AJ536866 / + / +
Thermophilic_streptomyces clone SHA-34 / AJ306762 / + / +
Bifidobacterium aerophilum / AY278612 / + / +
Desulfotomaculum thermobenzoicum / Y11574 / + / +
Syntrophomonas_assemblage Saltmarsh clone LCP-89 / AF286032 / + / +
Alicyclobacillus_group Gram-positive iron-oxidizing acidophile Y0010 / AY529492 / + / +
Environmental_clone_opb80_group UASB_TL26 / AF254404 / + / +
Environmental_clone_sar202_subgroup soil clone S085 / AF507693 / + / +
Dh.ethenogenes_subgroup clone TK30 / AJ347055 / + / +
Environmental_clone_wchb1-31_group clone KM87 / AY216458 / + / +
Chlamydophila pneumoniae c2 / NC002179 / + / +
Geobacter metallireducens_subgroup OP10 clone S1a-1H / AY192275 / + / +
Anr.thermoterrenum_group clone JG30-KF-CM45 / AJ536890 / + / +
Marinomonas_assemblage gamma MERTZ_2CM_247 / + / +
Environmental_clone_t78_group clone JG37-AG-138 / AY913277 / + / +
B.sporothermodurans_subgroup clone cvf77034 / + / +
Fulvimarina pelagi / AY178860 / - / +
Methylobacter marinus / AF304197 / - / +
Deinococcus_group Deinococci clone LA7-B27N / AF513964 / - / +
Hyphomicrobium zavarzinii / Y14304 / + / +
Holospora_subgroup alpha clone 10B6 / AJ428412 / + / +
Lew.nigricans_subgroup CFB group clone SM1A07 / AF445648 / + / +
Environmental_clone_ocs307_group clone ZA3312c / AACY01094130 / - / +
Secondary endosymbiont c3 / AF476110 / + / +
Frankia_subgroup actinobacterium clone R18 / AY265343 / - / +
Ectothiorhodospira_group clone JG30-KF-CM35 / AJ536882 / + / +
Bartonella_subgroup clone v9. / U87831 / + / +
Environmental_clone_rb25_group clone Sva0515. / AJ241004 / + / +
Vr.pantothenticus_subgroup Salibacillus sp. YIM-kkny16 / AY121439 / + / +
Bur.cepacia_subgroup Enrichment culture clone 0LB-F / AY323827 / + / +
Dsv.desulfuricans_subgroup delta clone:Rs-M89 / AB089109 / + / +
Caryophanon latum / AJ491302 / + / +
Azs.lipoferum_subgroup Rhodocista sp. AR2107 / AJ401217 / + / +
Syntrophomonas_assemblage clone R4b14 / AF482440 / + / +
Chromohalobacter marismortui / AJ295144 / + / +
Spironema culicis / AF166259 / + / +
Acinetobacter tandoii / AF509830 / + / +
Dbb.propionicus_assemblage Cytophaga sp. BHI60-57B / AJ431236 / + / +
Moorella_group Anaerobic syntrophic JE / AB106352 / + / +
Bde.stolpii_subgroup delta clone JG37-AG-139 / AJ518802 / + / +
Thb.ferrooxidans_subgroup clone BA11 / AF543507 / + / +
Calyptogena_symbionts_subgroup sequences clone: IheB2-31 / AB099939 / + / +
Luteimonas mephitis / AJ012228 / - / +
Dv.riboflavina_subgroup Agricultural soil clone SC-I-78 / - / +
Environmental_clone_rb40_group unnamed organism. / - / +
Spg.pruni_subgroup clone LRE17 / - / +
Environmental_clone_s027_group rumen clone BS5 / AY244959 / + / +
Lactobacillus letivazi / AJ417738 / - / +
Mycoplasma gypsbengalensis / AY191226 / + / +
Maricaulis virginensis / AJ227809 / - / +
Phenylobacterium immobile / Y18216 / - / +
Staphylococcus_subgroup Staphylococcussp. str. AG-30. / X86641 / + / +
Spm.paucivorans_subgroup clone SHA-109 / AJ306783 / + / +
Dfm.geothermicum_group low G+C Gram-positive YNPRH70A / AF465653 / + / +
Environmental_clone_c0s62 clone AW4 / AF543501 / - / +
Nitrospira cf / AF033558 / - / +
Pseudomonas putida c2 / - / +
Fucophilus fucoidanolyticus / AB073978 / + / +
Pb.immobile_subgroup Caulobacter sp.H62 / AB076664 / - / +
Thc.gelatinosa_assemblage clone SBRC_30 / + / +
Arhodomonas_and_nitrococcus_group gamma clone ML602J-47 / AF507818 / + / +
Spi.spmast_subgroup spirochete clone: NkS-Ste2 / AB085161 / - / +
Spg.pruni_subgroup mRNA clone sipK48 / AJ307938 / - / +
Pal.haloplanktis_subgroup Pseudoalteromonas kps64f / - / +
Ver.sp_str_veglc2_subgroup clone RCP2-6 / AF523903 / + / +
Cau.vibrioides_subgroup_ii Caulobacter sp. str. FWC38. / AJ227774 / - / +
Gloeobacter_group soil PBS-II-1 / AJ390438 / - / +
Shewanella surugaensis / AB094597 / - / +
Achromatium_assemblage Gamma IR / AF521582 / - / +
Dsm.acetoxidans_subgroup delta clone GuBH2-AG-114 / AJ519664 / - / +
Mlm.methanica_subgroup gamma SA51 / - / +
Thermophilic_streptomyces Streptomyces sp. str. TB3481. / X76705 / - / +
Environmental_clone_mb1228_group species clone mb3429 / AY281352 / - / +
Bei.indica_subgroup unnamed organism. / AJ563927 / - / +
Spg.pruni_subgroup soil clone 739-2 / AF423289 / - / +
Environmental_clone_rb25_group clone JG34-KF-153 / AJ532721 / + / +
Acbt.capsulatum_group Acidobacterium group clone CLs73 / AF529350 / + / +
C.leptum_subgroup ckncm197-F4MB5 / + / +
C.aurantibutyricum_subgroup low G+C Gram-positive clone ML635J-34 / AF507889 / - / +
Achromatium_assemblage marine ZD0408 / AJ400349 / + / +
Geodermatophilus obscurus / X92355 / - / +
Environmental_clone_opb5_group soil PBS-25 / AJ390463 / + / +
Myx.xanthus_subgroup clone P45. / - / +
Bl.viridis_assemblage Metal-contaminated soil clone K20-82 / - / +
Environmental_clone_mc4_group earthworm cast clone c229 / + / +
Stc.salivarius_subgroup human infant N108E / - / +
Dietzia maris / X79290 / + / +
Thermophilic_streptomyces actinobacterium clone Bol7 / AY193208 / + / +
Bei.indica_subgroup alpha clone W2b-8B / + / +
Shewanella alga c3 / AF005249 / - / +
Desulfomicrobium baculatum c2 / AF030438 / - / +
Msi.trichosporium_subgroup clone Tc66 / - / +
Dbb.propionicus_assemblage delta clone JG37-AG-30 / AJ518791 / + / +
Eub.tenue_subgroup TM7 clone: Rs-045 / - / +
Leg.cincinnatiensis_subgroup gamma clone AEGEAN_234 / AF406526 / - / +
Sphaerotilus natans / Z18534 / - / +
Mag.gryphiswaldense_subgroup Dechlorospirillum sp. SN1 / AY171615 / + / +
Gloeothece-gloeocapsa_group Synechococcus sp. HOG / AF448074 / - / +
Bac.fragilis_subgroup Bacteroidaceae clone: Rs-008 / AY643492 / + / +
Xylella fastidiosa / - / +
Aob.cryaerophilus_subgroup str. 77.d. / AB013833 / - / +
Nss.multiformis_subgroup antarctic soil clone bh1.36 / - / +
Prv.ruminicola_subgroup clone RF37. / AF001768 / - / +
Thermophilic_oxygen_reducers Coprothermobacter sp. Dex80-3 / AJ431258 / + / +
Oscillatoria_group clone:Rs-H34 / AB089123 / + / +
Desulfobulbus_assemblage clone FW13 / AF523973 / + / +
Environmental_clone_iii1-8_group delta clone Hyd24-32 / AJ535231 / + / +
Couchioplanes caeruleus / D14645 / - / +
Environmental_clone_wchb1-31_group clone SHA-8 / AJ306741 / + / +
Environmental_clone_rb25_group clone FW144 / AF523986 / + / +
Green_algae_chloroplasts plastid clone ML310M-37 / AF454327 / - / +
Prsb.dejongeii_subgroup Verrucomicrobia clone P. palm C 85 / AJ441222 / - / +
Rco.rhodochrous_group Rhodococcus sp. IM-43760 / + / +
Flx.sancti_subgroup soil clone 760-2 / AF423292 / + / +
Spg.subarctica_subgroup Agricultural soil isolate SI-15 / - / +
Hyp.denitrificans_subgroup clone LO13.3 / AF358017 / - / +
Ral.solan4_subgroup RalstoniaCtaxAus-5 / - / +
Ochrobactrum intermedium / U70978 / - / +
Lptx.discophora_subgroup Beta A1004 / AF236009 / - / +
Cllm.flavigena_subgroup Actinobacterium WB2 / AB078841 / - / +
Lptx.mobilis_subgroup rape rhizosphere wr0017 / AJ289885 / - / +
Dcl.agitatus_subgroup clone F13.33 / AF314420 / - / +
Environmental_clone_opb56_group sludge A12b / AF234699 / + / +
B.alcalophilus_subgroup Bacillus sp. clone ML615J-19 / AF454300 / + / +
Environmental_clone_vadin_ba07_subgroup soil clone S1204 / AF507715 / + / +
Moorella_group Verrucomicrobia clone LD1-PA39 / AY114325 / + / +
Environmental_rb_clones_group clone RB41. / Z95722 / + / +
Lepocinclis fusiformis / AF289249 / + / +
Achromatium_assemblage Selenate-reducing KE4OH1 / AF432146 / + / +
Pb.immobile_subgroup Alpha A0902 / AF236003 / - / +
Rhodococcus fascians / AB180236 / - / +
Hgh.thermoluteolus_subgroup beta clone ST01-SN1D / AY222297 / - / +
Wolbachia endosymbiont / AF035160 / + / +
Pirellula_schlesner_isolates planctomycete clone CY0ARA028B09 / BX294785 / + / +
Moorella_group clone MB-C2-106 / AY093477 / - / +
Rhn.lindaniclasticus_subgroup Gamma A40-1 / AY049941 / + / +
Cllm.flavigena_subgroup sp. Lake Bogoria isolate 69B4 / X92152 / + / +
B.alcalophilus_subgroup sp. Lake Bogoria isolate 64B4 / X92160 / - / +
Dsv.desulfuricans_subgroupDesulfovibrio sp. str. KRS2. / - / +
Microbacterium gubbeenense / AF263565 / - / +
Bl.viridis_assemblage Metal-contaminated soil clone K20-01 / - / +
Nss.multiformis_subgroup clone JG30-KF-AS41 / AJ536880 / - / +
Sphingobacterium_group clone 47 / AF513095 / + / +
Chloroflexus_assemblage Green non-sulfur B1-5 / AB079645 / + / +
Mrb.hydrocarbonoclasticus_group clone SHA-37 / AJ306784 / + / +
Frankia_subgroup clone Gitt-KF-183 / AJ532700 / - / +
Roseospira navarrense / AJ298880 / - / +
Geobacter metallireducens_subgroup clone ZA3735c / AF382143 / - / +
Tdv.yellowstonii_group clone FW19 / AF524005 / - / +
Tar.marianensis_group clone TK19 / AJ347028 / - / +
Pol.cellulosum_subgroup clone csbio160144 / - / +
Mannheimia haemolytica c2 / - / +
Virgosporangium ochraceum / AB006169 / + / +
Caulobacter maris / AJ227803 / - / +
Dv.riboflavina_subgroup alpha clone:Rs-B50 / AB089085 / + / +
Environmental_clone_ply43_subgroup alpha clone Arctic96B-6 / AF353224 / - / +
Environmental_clone_opb35_subgroup clone FW4 / AF523995 / - / +
Str.sbr1108 SBR1108 / AF269004 / - / +
Thermosipho_group Thermosipho sp. MV1063 / AJ419874 / + / +
Environmental_clone_opb80_group clone FW68 / AF524022 / + / +
Environmental_clone_opb2_group Banisveld landfill BVC56 / AY013695 / + / +
Environmental_clone_wchb1-58_group OD1 clone Bol25 / - / +
Pseudomonas flavescens / U01916 / + / +
Flx.sancti_subgroup GKS2-106 / AJ290025 / - / +
Environmental_clone_rb40_group species clone mb2430 / Z95735 / - / +
Rhf.fermentans_subgroup beta clone 08 / AF361193 / - / +
Rb.sphaeroides_subgroup GR-Sh1-107 clone GR-Sh1-107 / - / +
Caulobacter fusiformis / AJ007803 / - / +
A.ferrooxidans_subgroup firmicute ARCT1-16 / - / +
Anr.thermoterrenum_group TA19 / AF229792 / + / +
Environmental_clone_ply43_subgroup alpha clone AEGEAN_233 / AF406547 / - / +
Azc.indigens_subgroup beta GC24 / AF204243 / - / +
Environmental_clone_opb5_group a2b010 / AF419671 / - / +
Spirulina subsalsa / AF329394 / - / +
Peb.acetylenicus_subgroup clone Sh765B-TzT-35 / AJ519650 / - / +
Helicobacter pylori / U00679 / - / +
Frankia_subgroup actinobacterium clone FBP417 / AY250883 / + / +
Tilapia parasite / AF206675 / - / +
Osp.maris_subgroup Oceanospirillum sp. MED92 / + / +
Burkholderia mallei / + / +
Rtb.rathayi_subgroup Clavibacter kpa40f / - / +
Environmental_clone_rb25_group MERTZ_2CM_263 / - / +
Spirilliplanes yamanashiensis / D63912 / - / +
Tar.marianensis_group Gram-positive clone FTL22 / AF529103 / - / +
Syntrophus gentianae / X85132 / + / -
Bur.glathei_subgroup clone CCU24 / AY221080 / + / -
Chlorobium limicola c2 / AB054671 / + / -
Alvinella_pompejana_symbionts_subgroup epsilon VC1.2-cl06 / AF367484 / + / -
Dbb.propionicus_assemblage Verrucomicrobia clone LD1-PA38 / AY114324 / + / -
Pas.bisgaard_taxon_13_subgroup soil clone Tc131-39 / + / -
Ps.amygdali_subgroup gamma MERTZ_2CM_253 / - / +

A genus was considered present when fraction of probes (pf) in an OTUs probe set was ≥0.9. Genera printed in boldare either known to reduce uranium(VI) to uranium(IV) [53] or have been reported earlier from uranium-contaminated settings [1, 4, 30, 32].