SSR-Based Parentage Analysis of the Elite Apple Cultivar Golden Delicious

SSR-Based Parentage Analysis of the Elite Apple Cultivar Golden Delicious

SUPPLEMENTARY ELECTRONIC MATERIALS

Silvio Salvi1,2, Diego Micheletti1, Pierluigi Magnago1, Marco Fontanari1, Roberto Viola 1, Massimo Pindo 1, RiccardoVelasco 1

One-step reconstruction of multigeneration pedigree networks in apple (Malus × domestica Borkh.) and the parentage of Golden Delicious

1Centre for Research and Innovation, Fondazione Edmund Mach, via E. Mach 1, 38010 San Michele all’Adige, Italy

2 Department of Agricultural Science, University of Bologna, viale Fanin 44, 40127 Bologna, Italy

Corresponding author: Riccardo Velasco, , ph. +39 0461 615257

Supplementary Table 1 Reported and/or reconstructed parentage of apple cultivars with reference for reported parentages

Note on cited source of information about parentages and origin of apple cultivars

Information about apple pedigrees were drawn from sources as authoritative as possible (ie. scientific literature, such as the collection of pedigrees reported in Evans et al. 2010). We additionally reported source of information about apple of unknown origins, or originated as chance seedlings, and sources of anecdotic information. All references are provided at the bottom of this table.

Cultivar 1 / Reported parentage 2 / Reference 3 / Pedigree status 4 / Reconstructed parentage in this study5
Ambassy (Delbarestivale = Delcorf =Monidel) / GD x Jongrimes / Evans et al. (2010) / PE / OK
Ambrosia / Chance seedling supposedly from GD x Delicious / Hampson and Kemp (2003); Mennell and Mennell (1997) / AS / AS confirmed here.
Amorosa (sport of Aroma) / Ingrid Marie x Filippe / Garkava-Gustavsson et al. (2008) / PE / OK
Annurca / Unknown / Morgan and Richards (2002); Sansavini (2008)
Antonovka / Unknown / Bus et al. (2012)
Ariwa / GD x A849-5 / Brown and Maloney (2009) / PE / Assigned as offspring of Saturn (closely related to GD). Compatible with GD by exclusion test.
Baujade / Granny Smith xP5R42-52 (PRI 672-3 x Reinette du Mans]) / Hampson and Kemp (2003) / PE / OK
Ben Davis / Unknown / Morgan and Richards (2002)
Brina / PRI2059-101 OP / Sansavini (2008)
Calville / Unknown / Morgan and Richards (2002)
Cameo® (Camela® = Caudle) / GD x Delicious / Evans (2011) / PE / OK
Catarina / Fuji x Unknown / Brown and Maloney (2003) / PE / OK
Clivia / Geheimrat Dr Oldenburg x Cox / Evans et al. (2010) / PE / OK
Coop 36 (PRI 2720-18) / PRI 2050-2x GD / Crosby et al. (1993) / PE / OK
Cox’s Orange Pippin / Unknown / Hampson and Kemp (2003)
Crimson Snow (MC38) / Chance seedling supposedly related with Cripps Pink / Luby and Bedford (2006) / AS / Assigned as offspring of Delicious. A very close relationship with Cripps Pink was suggested (See Discussion)
Cripps Pink (Pink Lady ®) / GD x Lady Williams / Evans et al. (2010) / PE / OK
Dalinette(Choupette®) / X-4598 × X-3174 /
Delblush (Tentation®) / GD x Blushing Golden (Grifer) / Hampson and Kemp (2003) / PE / OK
Delcoros (Autento®) / Delgollune (GD x Lundbytorp) x Cox / Brown and Maloney (2009) / PE / OK
Delgrared / Jenimota (GD spur) x Akane (Primrouge) / Morgan and Richards (2002) / PE / OK
Delicious / Chance seedling / Hampson and Kemp (2003)
Delorina (Harmonie®) / Blushing Golden (Grifer) x Florina / Morgan and Richards (2002) / PE / OK
Discovery / Seedling of Worcester Pearmain / Morgan and Richards (2002)
Milwa (Faw5878, Junami®, Diwa®) / (Idared x Maigold) x Elstar / / PE / OK
Dorianne / X-6823 x X-4638 / Evans et al. (2010) / PE
Durello di Forlì / Unknown / Tartarini et al. (2004)
Earlygold (Snygold) / Chance seedling supposedly related with GD / Norton and King (1987) / AS / AS confirmed here
Elan / GD x Ingrid Marie / Evans et al. (2010) / PE / OK
Elstar / GD x Ingrid Marie / Evans et al. (2010) / PE / OK
Enterprise (Coop30) / Complex pedigree PRI 1661–2 x PRI 1661–1 / Crosby et al. (1994) / PE
Fiesta / Cox x Idared / Evans et al. (2010) / PE / OK
Florina / PRI 612-1 x Jonathan / Evans et al. (2010) / PE / OK
Forlady / Forum x Lady Williams / Sansavini et al. (2003)
Fuji / Ralls Janet x Delicious / Evans et al. (2010) / PE / OK
G.41 / M.27 x Robusta5 / Robinson et al. (2003) / PE / OK
Gala / Kidd’s Orange Red x GD / Evans et al. (2010) / PE / OK
Ginger Gold / Chance seedling supposedly related with GD / Marini (1995) / AS / AS confirmed here
Gloster / Weisser Winterglockenapfelx Delicious / Evans et al. (2010) / PE / OK
Golden Delicious
(GD) / Chance seedling supposedly related with Grimes Golden / Hampson and Kemp (2003); Cabe et al. (2005) / AS / AS confirmed here
Golden Reinette / Unknown / Morgan and Richards 2002); Calhoun 2010)
GoldRush (Coop 38) / GD x Coop 17 / Evans et al. (2010) / PE / OK
Granny Smith / Chance seedling / Hampson and Kemp (2003)
Grimes Golden / Unknown / Morgan and Richards (2002)
Idared / JonathanxWagenerapfel / Evans et al. (2010) / PE / OK
Ingrid Marie / Cox x(Guldborg ?) / Evans et al. (2010) / PE / OK
James Grieve / Cox x Unknown / Evans et al. (2010) / PE / OK
Jonamac / McIntosh x Jonathan / Way (1972) / PE / OK
Jonafree (= Coop22 = PRI 2016-100) / PRI855-102 x NJ31, complex pedigree including Jonathan and GD / Crosby et al. (1992) / PE
Jonathan / Unknown / Hampson and Kemp (2003)
Jongrimes (Jonagrimes) / Unknown, supposed Jonathan x Grimes Golden / Morgan and Richards (2002); / AS / AS was confirmed for Grimes Golden but not for Jonathan
Kent / Cox x Jonathan / Evans et al. (2010) / PE / Consistent with Cox only, as also observed in Evans et al. 2010
Laxton’s Superb / Wyken Pippin x Cox / Morgan and Richards (2002) / PE / OK
Ligol / Linda x GD / Evans et al. (2010) / PE / OK
Limoncini / Unknown
Lord Lambourne / James Grieve x Worcester Pearmain / Evans et al. (2010) / PE / OK
M.27 / M.9 x M.13 / Webster and Wertheim (2003) / PE / OK
M.9 / Unknown / Webster and Wertheim (2003)
McIntosh / Unknown / Hampson and Kemp (2003)
Mela della serla / Unknown
Modì (Civg198) / Liberty x Gala / Luby and Bedford (2006) / PE / OK
Napoleon / Unknown
P.16 / Longleaf x M.9 / Webster and Wertheim (2003) / PE / OK
Pearmain Dorè / Unknown / Morgan and Richards (2002)
Pilot / Clivia x Undine / Evans et al. (2010) / PE / Assigned as Clivia x Jonathan
Pinova / Clivia x GD / Evans et al. (2010) / PE / OK
Piok / Unknown
Piros / Helios (Oldenburg × ?) × Apollo (Cox × Oldenburg) / Morgan and Richards (2002)
PRI 14-126 / GD x F2 26829-2-2 / Evans et al. (2010) / PE / OK
Prima / (GD x F2 26829-2-2z) x ((Melba x (Wealthy x Starr))x (Rome Beauty x Melba)) / Evans et al. (2010) / PE / Assigned as offspring of Renora
Primiera (Coop42) / GD x Coop17 / Goffreda et al. (1995) / PE / OK
Priscilla / Delicious x PRI 610-2 / Evans et al. (2010) / PE / OK
Reanda / Clivia x BX 44,14 / Pillnitzer
Obstsorten (2009); Evans et al. (2010) / PE / OK
Rebella / GD x Remo / Pillnitzer
Obstsorten (2009) / PE / OK
Redearly / Coop14 x unknown
Redfield / Wolf River x M. sieversii var. niedzwetzkyana, / Brooks and Olmo (1972)
Reinette Ananas / Unknown / Morgan and Richards (2002)
Renora / Clivia x BX 44,2 / Pillnitzer
Obstsorten (2009); Evans et al. (2010) / PE / OK
Retina / Apollo x BX 44,2 / Pillnitzer
Obstsorten (2009)
Rewena / (Cox x Oldenburg) x BX 44,14 / Pillnitzer
Obstsorten (2009); Noiton and Alspach (1996) / Assigned as offspring of Reanda.
Rome Beauty / Unknown / Hampson and Kemp (2003)
Rosa di Caldaro / Unknown
Rosana / Jolanax Lord Lambourne / Crosby et al. (1992) / PE / OK
Rubens (Civni) / Gala x Elstar / Evans et al. (2010) / PE / OK
Rubin / GD x Lord Lambourne / Evans et al. (2010) / PE / OK
Rubinette / GD x Cox / Evans et al. (2010) / PE / OK
Rubinola / Prima x Rubin / Hana and Pavel (2001);Evans et al. (2010) / PE / Confirmed both Prima and Rubin, differently from Evans
San Lugano / Unknown
Sansa / Gala x Akane / Noiton and Alspach (1996) / PE / OK
Saturn / PRI 1235 x GD / Hampson and Kemp (2003) / PE / OK
Sila / Unknown
Sonya® (Nevson) / Galax Delicious / Brown and Maloney (2009) / PE / Gala is confirmed, while Delicious is not
Spartan / McIntosh xYellow Newtown / Evans et al. (2010) / PE / Confirmed for McIntosh. Yellow Newton was not included in collection and our data indicated Delicious as second parent.
Spitzlederer / Unknown / Morgan and Richards (2002)
Stettino / Unknown
Summerfree / PRI 1956-6 x Ed Gould Golden / Bergamini and Giongo (2002) / PE / Assigned as offspring of Coop 36, with which however shares much of the pedigree
Suncrisp / GD x (Cox x Cortland) / Marini (1995) / PE / OK
Topaz / Rubin × Vanda / Evans et al. (2010) / PE / OK
Tunda / Ambassy x Liberty / Brown and Maloney (2009) / PE / OK
Yellow Bellflower / Unknown / Morgan and Richards (2002)
White Rosmarine / Unknown

1 Common synonymous or registered names are in brackets. Golden Delicious and Cox’s Orange Pippin are indicated as GD and Cox, respectively, in pedigrees.

2 Pedigree as known from literature. Cultivars present in this study are in bold.

3 Reference for the reported parentage.

4 AS = Anecdotic suggestion; PE = Previously established.

5 OK indicates accordance between reported and here reconstructed pedigrees. Additional comments are provided when needed.

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Supplementary Table 2 FRANz output file (‘parentage.csv’) listing the estimated parent-offspring relationships and related parameters. GD = Golden Delicious

Offspring / Loci Typed / Parent 1 / Loci Typed / Parent 2 / Loci Typed / LOD / Posterior / Common Loci Typed / Mismatches / n_f / n_m / Pair LOD Parent 1 / Pair LOD Parent 2 / Posterior Parent 1 / Posterior Parent 2
GD / 27 / GrimesG / 27 / 11.0 / 1 / 27 / 0 / 64 / 64 / 11.0 / 1 / 1
Delicious / 27 / 0.0 / 1 / 27 / 0 / 60 / 60 / 1 / 1
Ambassy / 27 / Jongrimes / 25 / GD / 27 / 46.2 / 0.9041 / 27 / 0 / 93 / 93 / 27.9 / 10.7 / 1 / 0.9041
Ambassy / 27 / Jongrimes / 25 / EarlyGold / 27 / 44.2 / 0.0959 / 27 / 0 / 93 / 93 / 27.9 / 6.7 / 1 / 0.0959
Ambrosia / 27 / Delicious / 27 / GD / 27 / 31.9 / 0.9994 / 27 / 0 / 106 / 106 / 13.5 / 7.6 / 1 / 0.9994
Amorosa / 25 / IngridMa / 26 / 15.8 / 1 / 25 / 0 / 82 / 82 / 15.8 / 1 / 1
Annurca / 27 / 0.0 / 1 / 27 / 0 / 60 / 60 / 1 / 1
Antonovka / 25 / 0.0 / 1 / 25 / 0 / 121 / 121 / 1 / 1
Ariwa / 26 / Saturn / 26 / 12.6 / 0.9929 / 26 / 0 / 114 / 114 / 12.6 / 0.9929 / 1
Belfiore / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
BenDavis / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Baujade / 27 / Grannys / 27 / 13.1 / 1 / 27 / 1 / 111 / 111 / 13.1 / 1 / 1
Brina / 27 / 0.0 / 1 / 27 / 0 / 120 / 120 / 1 / 1
Calvilla / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
Cameo / 26 / Delicious / 27 / GD / 27 / 33.0 / 0.9971 / 26 / 1 / 106 / 106 / 17.7 / 5.0 / 1 / 0.9971
Catarina / 26 / Fuji / 26 / 26.2 / 0.9251 / 27 / 0 / 93 / 93 / 26.2 / 0.9251 / 1
Catarina / 26 / Delicious / 27 / 23.3 / 0.0749 / 27 / 0 / 93 / 93 / 23.3 / 0.0749 / 1
Clivia / 27 / Coxorange / 27 / 14.5 / 1 / 27 / 0 / 73 / 73 / 14.5 / 1 / 1
Coop36 / 26 / GD / 27 / 14.0 / 0.9915 / 26 / 0 / 95 / 95 / 14.0 / 0.9915 / 1
Coxorange / 27 / 0.0 / 1 / 27 / 0 / 62 / 62 / 1 / 1
CrimsonS / 27 / Delicious / 27 / 14.7 / 1 / 27 / 0 / 118 / 118 / 14.7 / 1 / 1
Dalinred / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Delblush / 27 / GD / 27 / 15.2 / 0.9559 / 27 / 0 / 100 / 100 / 15.2 / 0.9559 / 1
Delcoros / 27 / Coxorange / 27 / 15.5 / 1 / 27 / 0 / 110 / 110 / 15.5 / 1 / 1
Delgrared / 27 / GD / 27 / 13.8 / 0.9999 / 27 / 0 / 121 / 121 / 13.8 / 0.9999 / 1
Delorina / 26 / Florina / 26 / 14.0 / 1 / 26 / 1 / 116 / 116 / 14.0 / 1 / 1
Discove / 18 / 0.0 / 1 / 18 / 0 / 78 / 78 / 1 / 1
Diwa (Milwa) / 27 / Elstar / 27 / 14.6 / 1 / 27 / 0 / 121 / 121 / 14.6 / 1 / 1
Dorianne / 27 / GD / 27 / 13.6 / 0.8805 / 27 / 0 / 106 / 106 / 13.6 / 0.8805 / 1
Dorianne / 27 / Elstar / 27 / 11.3 / 0.111 / 27 / 0 / 106 / 106 / 11.3 / 0.111 / 1
DurelloFo / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
EarlyGold / 27 / GD / 27 / 7.6 / 0.7009 / 27 / 0 / 93 / 93 / 7.6 / 0.7009 / 1
EarlyGold / 27 / Ambassy / 27 / 6.7 / 0.2985 / 27 / 0 / 93 / 93 / 6.7 / 0.2985 / 1
Elan / 26 / IngridMa / 26 / GD / 27 / 37.8 / 1 / 26 / 0 / 98 / 98 / 18.5 / 11.6 / 1 / 1
Elstar / 27 / IngridMa / 26 / GD / 27 / 33.5 / 0.9991 / 27 / 0 / 83 / 83 / 15.5 / 12.0 / 1 / 0.9991
Enterpris / 27 / 0.0 / 1 / 27 / 0 / 116 / 116 / 1 / 1
Florina / 26 / Jonathan / 24 / 8.4 / 0.9999 / 26 / 1 / 99 / 99 / 8.4 / 0.9999 / 1
Forlady / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
Fiesta / 26 / Idared / 27 / Coxorange / 27 / 43.3 / 1 / 26 / 0 / 95 / 95 / 16.5 / 19.0 / 1 / 1
Fuji / 26 / Delicious / 27 / 24.9 / 1 / 26 / 0 / 75 / 75 / 24.9 / 1 / 1
G41 / 27 / M27 / 27 / 28.2 / 1 / 27 / 0 / 121 / 121 / 28.2 / 1 / 1
Gala / 27 / GD / 27 / 6.8 / 0.9769 / 27 / 0 / 74 / 74 / 6.8 / 0.9769 / 1
Gingergo / 27 / GD / 27 / 7.9 / 0.999 / 27 / 0 / 121 / 121 / 7.9 / 0.999 / 1
Gloster / 26 / Delicious / 27 / 16.8 / 1 / 26 / 0 / 88 / 88 / 16.8 / 1 / 1
GoldRei / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Goldrush / 26 / GD / 27 / 16.2 / 1 / 26 / 0 / 82 / 82 / 16.2 / 1 / 1
Grannys / 27 / 0.0 / 1 / 27 / 0 / 63 / 63 / 1 / 1
GrimesG / 27 / 0.0 / 1 / 27 / 0 / 61 / 61 / 1 / 1
Idared / 27 / Jonathan / 24 / 8.8 / 0.9997 / 27 / 1 / 76 / 76 / 8.8 / 0.9997 / 1
IngridMa / 26 / Coxorange / 27 / 12.5 / 1 / 26 / 0 / 70 / 70 / 12.5 / 1 / 1
JamesG / 26 / Coxorange / 27 / 14.9 / 1 / 26 / 1 / 65 / 65 / 14.9 / 1 / 1
Janamac / 26 / McIntosh / 26 / Jonathan / 24 / 46.0 / 1 / 26 / 0 / 77 / 77 / 26.5 / 11.8 / 1 / 1
Jonafree / 26 / 0.0 / 1 / 26 / 0 / 97 / 97 / 1 / 1
Jonathan / 24 / 0.0 / 1 / 24 / 0 / 60 / 60 / 1 / 1
Jongrimes / 25 / GrimesG / 27 / 19.4 / 1 / 25 / 0 / 70 / 70 / 19.4 / 1 / 1
Kent / 27 / Coxorange / 27 / 13.8 / 0.8807 / 27 / 1 / 82 / 82 / 13.8 / 0.8807 / 1
Kent / 27 / IngridMa / 26 / 11.5 / 0.1193 / 27 / 1 / 82 / 82 / 11.5 / 0.1193 / 1
LaxtonSup / 26 / Coxorange / 27 / 20.3 / 1 / 26 / 0 / 66 / 66 / 20.3 / 1 / 1
Limonc / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
LordLamb / 23 / JamesG / 26 / 15.8 / 1 / 23 / 0 / 68 / 68 / 15.8 / 1 / 1
Ligol / 26 / GD / 27 / 10.0 / 0.9999 / 26 / 0 / 121 / 121 / 10.0 / 0.9999 / 1
M27 / 27 / M9 / 24 / 20.5 / 1 / 27 / 0 / 72 / 72 / 20.5 / 1 / 1
M9 / 24 / 0.0 / 1 / 24 / 0 / 67 / 67 / 1 / 1
McIntosh / 26 / 0.0 / 1 / 26 / 0 / 60 / 60 / 1 / 1
MelaSerla / 24 / 0.0 / 1 / 24 / 0 / 121 / 121 / 1 / 1
Modi / 27 / Gala / 27 / 13.2 / 1 / 27 / 0 / 114 / 114 / 13.2 / 1 / 1
Napole / 25 / 0.0 / 1 / 25 / 0 / 121 / 121 / 1 / 1
P16 / 26 / M9 / 24 / 22.0 / 1 / 26 / 0 / 84 / 84 / 22.0 / 1 / 1
PearmainD / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
Pilot / 27 / Jonathan / 24 / Clivia / 27 / 27.5 / 1 / 27 / 2 / 85 / 85 / 15.6 / 17.1 / 1 / 1
Pinklady / 27 / GD / 27 / 14.2 / 1 / 27 / 0 / 93 / 93 / 14.2 / 1 / 1
Pinova / 24 / Clivia / 27 / GD / 27 / 34.0 / 0.9789 / 24 / 0 / 106 / 106 / 15.3 / 10.7 / 1 / 0.9789
Piok / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Piros / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
PRI14126 / 25 / GD / 27 / 11.1 / 0.9976 / 25 / 0 / 121 / 121 / 11.1 / 0.9976 / 1
Prima / 27 / Renora / 27 / 9.7 / 1 / 27 / 1 / 93 / 93 / 9.7 / 1 / 1
Primiera / 27 / GD / 27 / 15.7 / 0.7917 / 27 / 0 / 118 / 118 / 15.7 / 0.7917 / 1
Primiera / 27 / Goldrush / 26 / 14.1 / 0.2014 / 27 / 0 / 118 / 118 / 14.1 / 0.2014 / 1
Priscilla / 27 / Delicious / 27 / 19.4 / 1 / 27 / 0 / 97 / 97 / 19.4 / 1 / 1
Reanda / 27 / Clivia / 27 / 20.2 / 1 / 27 / 0 / 121 / 121 / 20.2 / 1 / 1
Rebella / 27 / GD / 27 / 9.7 / 0.9385 / 27 / 0 / 109 / 109 / 9.7 / 0.9385 / 1
Rebella / 27 / Elstar / 27 / 6.7 / 0.0612 / 27 / 1 / 109 / 109 / 6.7 / 0.0612 / 1
Redearly / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Redfield / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
Renettana / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Renora / 27 / Clivia / 27 / 19.4 / 1 / 27 / 0 / 121 / 121 / 19.4 / 1 / 1
Retina / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
Rewena / 26 / Reanda / 27 / 16.8 / 1 / 26 / 1 / 108 / 108 / 16.8 / 1 / 1
Romebe / 27 / 0.0 / 1 / 27 / 0 / 60 / 60 / 1 / 1
RosaCald / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
Rosana / 26 / LordLamb / 23 / 19.7 / 1 / 26 / 0 / 114 / 114 / 19.7 / 1 / 1
WhiteRosm / 26 / 4054a / 27 / 26.7 / 0.5011 / 26 / 1 / 121 / 121 / 26.7 / 0.5011 / 1
WhiteRosm / 26 / 0.0 / 0.4989 / 26 / 0 / 121 / 121 / 0.4989 / 1
Rubens / 27 / Gala / 27 / Elstar / 27 / 34.1 / 0.9996 / 27 / 0 / 108 / 108 / 16.8 / 13.2 / 1 / 0.9996
Rubin / 27 / LordLamb / 23 / GD / 27 / 27.5 / 0.9989 / 27 / 1 / 121 / 121 / 15.1 / 4.8 / 1 / 0.9989
Rubinette / 26 / Coxorange / 27 / GD / 27 / 25.8 / 1 / 26 / 2 / 86 / 86 / 11.9 / 8.8 / 1 / 1
Rubinola / 26 / Rubin / 27 / Prima / 27 / 37.0 / 1 / 26 / 0 / 121 / 121 / 14.0 / 15.9 / 1 / 1
SanLuga / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Sansa / 27 / Gala / 27 / 14.2 / 1 / 27 / 0 / 88 / 88 / 14.2 / 1 / 1
Saturn / 26 / GD / 27 / 12.0 / 0.9997 / 26 / 0 / 82 / 82 / 12.0 / 0.9997 / 1
Sila / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
Sonya / 26 / Gala / 27 / 15.5 / 0.9918 / 26 / 0 / 121 / 121 / 15.5 / 0.9918 / 1
Spartan / 26 / McIntosh / 26 / Delicious / 27 / 54.9 / 1 / 26 / 0 / 71 / 71 / 23.4 / 18.3 / 1 / 1
Spitzlede / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
Stettino / 25 / 0.0 / 1 / 25 / 0 / 121 / 121 / 1 / 1
SummerFr / 27 / Coop36 / 26 / 18.5 / 0.9989 / 27 / 0 / 120 / 120 / 18.5 / 0.9989 / 1
Suncrisp / 27 / GD / 27 / 13.5 / 0.9998 / 27 / 0 / 106 / 106 / 13.5 / 0.9998 / 1
Topaz / 26 / Rubin / 27 / 14.1 / 1 / 26 / 1 / 121 / 121 / 14.1 / 1 / 1
Tunda / 27 / Ambassy / 27 / 16.1 / 1 / 27 / 1 / 106 / 106 / 16.1 / 1 / 1
3685e / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
3688h / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
3691f / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
3762g / 22 / 0.0 / 1 / 22 / 0 / 121 / 121 / 1 / 1
4054a / 27 / 0.0 / 0.5011 / 27 / 0 / 121 / 121 / 0.5011 / 1
4054a / 27 / WhiteRosm / 26 / 26.7 / 0.4989 / 27 / 1 / 121 / 121 / 26.7 / 0.4989 / 1
4103a / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
4304e / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
4309c / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
4309d / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
sy4495f / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
sy4496w / 25 / 0.0 / 1 / 25 / 0 / 121 / 121 / 1 / 1
sy4497a / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
syCRA / 25 / 0.0 / 1 / 25 / 0 / 121 / 121 / 1 / 1
syM781 / 21 / 0.0 / 1 / 21 / 0 / 121 / 121 / 1 / 1
syM790 / 25 / 0.0 / 1 / 25 / 0 / 121 / 121 / 1 / 1
syM900 / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
syNO1 / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
syNO3 / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1
syNO4 / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
syNO5 / 27 / 0.0 / 1 / 27 / 0 / 121 / 121 / 1 / 1
syPOL / 26 / 0.0 / 1 / 26 / 0 / 121 / 121 / 1 / 1

Supplemental Figure1

Supplemental Figure2

Supplemental Figure 3

1