Suppl. Table S 1

Spot name ratio ratio

ID Gene Putative ID cis-J Me-JA

H77085 / AT1G21310 / proline-rich extensin-like family protein / 2.66 / 4.15
AA394416 / AT1G21310 / proline-rich extensin-like family protein / 2.3 / 3.56
T14002 / AT4G02520 / glutathione S-transferase, putative / 2.29 / 2.14
N37676 / AT3G16920 / glycoside hydrolase family 19 protein / 2.22 / 1.96
T45893 / AT5G44030 / cellulose synthase, catalytic subunit (IRX5) / 2.19 / 2.28
K15M2.19 / AT3G15050 / calmodulin-binding family protein / 2.06 / 3.22
T46417 / AT1G21310 / proline-rich extensin-like family protein / 1.95 / 3.3
AA650774 / AT1G21310 / proline-rich extensin-like family protein / 1.92 / 2.3
T20764 / AT3G49580 / expressed protein / 1.79 / 2.13
T44892 / AT2G37430 / zinc finger (C2H2 type) family protein / 1.78 / 1.59
F26B6.1 / AT2G23360 / transport protein-related / 1.78 / 1.18
H76130 / AT5G15630 / Encodes a member of the COBRA family / 1.74 / 2.92
T45414 / AT5G17420 / cellulose synthase, catalytic subunit (IRX3) / 1.72 / 1.14
MAG2.12 / AT3G14170 / expressed protein / 1.72 / 1.38
BE520578 / AT5G15970 / stress-responsive protein (KIN2) / stress-induced protein (KIN2) / 1.69 / 1.02
T46320 / AT5G14180 / lipase family protein / 1.67 / 3.75
MIE15.4 / AT3G18250 / expressed protein / 1.65 / 0.91
T41722 / AT5G59820 / zinc finger (C2H2 type) family protein / 1.64 / 0.77
AA721907 / AT4G30920 / cytosol aminopeptidase family protein / 1.62 / 0.54
R30453 / AT2G37090 / Encodes a protein with similarity to glycosyltransferases / 1.61 / 1.89
N97030 / AT5G15960 / stress-responsive protein (KIN1) / stress-induced protein (KIN1) / 1.54 / 1.15
H36397 / AT3G54040 / photoassimilate-responsive protein-related / 1.52 / 1.25
T4M8.14 / AT2G03430 / ankyrin repeat family protein / 1.51 / 1.71
BE522385 / AT1G32940 / subtilase family protein / 1.5 / 1.22
T44303 / AT3G54040 / photoassimilate-responsive protein-related / 1.49 / 1.9
AA712130 / AT5G60020 / laccase, putative / diphenol oxidase, putative / 1.49 / 0.9
T41560 / AT3G23090 / expressed protein / 1.47 / 1.58
H36655 / AT2G43590 / chitinase, putative / 1.46 / 3.91
N38084 / AT1G04290 / thioesterase family protein / 1.46 / 0.66
R65026 / AT5G64120 / peroxidase, putative / 1.43 / 0.61
F17I23_170 / AT4G30490 / AFG1-like ATPase family protein / 1.43 / 0.64
K24G6_19 / AT5G48850 / male sterility MS5 family protein / 1.41 / 1.89
N97294 / AT3G54040 / photoassimilate-responsive protein-related / 1.39 / 1.9
R64915 / AT3G45870 / integral membrane family protein / nodulin MtN21-related / 1.37 / 0.7
T28D5_60 / AT4G08370 / proline-rich extensin-like family protein / 1.35 / 1.27
T44623 / AT5G52310 / low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A / 1.34 / 1.16
AA597429 / AT5G67600 / expressed protein / 1.34 / 0.88
N65013 / AT5G15970 / stress-responsive protein (KIN2) / 1.34 / 0.99
AA067427 / AT5G24610 / expressed protein / 1.33 / 0.79
AA394586 / AT3G26690 / MutT/nudix family protein / 1.29 / 0.74
AA712502 / AT4G18780 / cellulose synthase, catalytic subunit (IRX1) / 1.27 / 1.05
R83947 / AT3G54420 / class IV chitinase (CHIV) / 1.25 / 1.37
H76067 / AT2G43150 / proline-rich extensin-like family protein / 1.24 / 2.99
F14P3.5 / AT3G02300 / regulator of chromosome condensation (RCC1) family protein / 1.22 / 0.7
T43297 / AT2G43150 / proline-rich extensin-like family protein / 1.21 / 3.75
T45510 / AT5G08790 / no apical meristem (NAM) family protein / 1.21 / 0.5
N38244 / AT1G67750 / pectate lyase family protein / 1.21 / 0.92
T88611 / AT2G43150 / proline-rich extensin-like family protein / 1.2 / 3.09
T46589 / AT1G69830 / Encodes a plastid-localized amylase / 1.19 / 0.84
AA712829 / AT1G21310 / proline-rich extensin-like family protein / 1.19 / 1.17
AA650693 / AT2G43150 / proline-rich extensin-like family protein / 1.18 / 3.2
H36990 / AT5G26340 / hexose transporter, putative / 1.17 / 0.73
F1C12_230 / AT4G20320 / similar to CTP synthase, putative / UTP-ammonia ligase / 1.16 / 0.51
R65243 / AT1G09560 / germin-like protein (GLP4) (GLP5) / 1.16 / 0.79
F13M22.21 / AT2G37710 / lectin protein kinase, putative / 1.16 / 0.5
W43169 / AT3G09940 / monodehydroascorbate reductase, putative / 1.11 / 0.85
T76798 / AT1G80550 / pentatricopeptide (PPR) repeat-containing protein / 1.11 / 0.94
T22A6_100 / AT4G24270 / RNA recognition motif (RRM)-containing protein / 1.09 / 0.73
F4D11_130 / AT4G32670 / similar to zinc finger (C3HC4-type RING finger) family protein / 1.08 / 0.76
F5E6.14 / AT3G06530 / BAP28-related, similar to Protein BAP28 / 1.08 / 0.89
F5H14.35 / AT2G20680 / glycosyl hydrolase family 5 protein / cellulase family protein / 1.07 / 1.78
T8I13.3 / AT2G47190 / myb family transcription factor (MYB2) / 1.07 / 1.48
T88361 / AT2G43150 / proline-rich extensin-like family protein / 1.06 / 3.29
AI100699 / AT5G17380 / pyruvate decarboxylase family protein / 1.05 / 1.56
T25N22.15 / AT2G07190 / hypothetical protein / 1.05 / 0.86
T43614 / AT5G35735 / auxin-responsive family protein / 1.04 / 0.87
K9P8_4 / AT5G49900 / expressed protein / 1.04 / 1.23
BE520289 / AT3G59910 / expressed protein / 1.04 / 4.13
T25K17_30 / AT4G26220 / caffeoyl-CoA 3-O-methyltransferase, putative / 1.04 / 1.25
T28I19_30 / AT4G37750 / ovule development protein aintegumenta (ANT) / 1.04 / 0.69
H76847 / AT5G13200 / GRAM domain-containing protein / 1.02 / 0.59
H76855 / AT2G14560 / expressed protein / 1.02 / 0.79
AA586070 / AT2G24500 / zinc finger (C2H2 type) family protein / 1.02 / 1.42
BE522343 / AT5G11670 / The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 / 1.01 / 1.68

Suppl. Table S 2

List of genes up co-regulated by either BOA or cis-jasmone

Signalling (2)

At1g70530 putative protein kinase

At2g05940putative protein kinase

Transcription (6)

At2g44130Kelch repeat-containing F-box protein

At1g01720NAC domain protein

At5g63790ANAC102 NAC domain containing protein 102

At5g39610NAM/CUC2-like protein

At4g38620putative transcription factor (MYB4)

At1g10585transcription factor; similar to bHLH family protein

Metabolism (15)

At4g34135UGT73B2; UDP-glycosyltransferase

At1g05560UDP-Glucose Transferase (UGT75B2)

At3g04000short-chain dehydrogenase/reductase (SDR) family protein

At1g55920serine acetyl transferase

At4g13180short-chain alcohol dehydrogenase

At4g15490indole-3-acetate beta-glucosyltransferase like protein

At5g39050 anthocyanin acyltransferase - like protein

At1g02850glycosyl hydrolase family 1 protein

At4g34138UDP-glycosyltransferase (UGT73B1)

At1g7669012-oxophytodienoate reductase (OPR2)

At2g37760aldo/keto reductase family protein

At5g16970quinone oxidoreductase -like protein

At2g36790UDP-Glucosyl Transferase activity

At2g29350 putative tropinone reductase

At1g67810similar to quinolinate synthetase A

Transport (3)

At1g79410transporter related protein

At3g21250ATMRP6 multidrug resistance-associated protein 6

At4g12480 pEARLI 1

Cell rescue and defense (2)

At3g13310DNAJ protein

At2g29420glutathione S-transferase family

Unknown/unclassified (3)

At5g61820putative protein

At2g36220unknown protein

At4g01870unknown protein, tolB protein-related

Suppl. Table 3

Gene specific primers were used to amplify portions of the following genes

At3g28740 (CYP81D11)

(F 5’-TATGATACTTGCCGGGACTG-3’; R 5’GGCATCAACTTTTTATCCTC-3’)

At2g44130 (F-Box protein)

(F 5’- CGAGAGACGTTTACGTTCTG-3’; R 5’- CATAACGTAGAGGAGCTTCT-3’)

At3g14990

(F 5’-CATGTTTTGTATAGGGTAAG-3’; R 5’-GTTTGAAATCACACAAGTGT-3’)

At3g1331

(F 5’-CGTCGTTTAAGGCTTCAGCT-3’; R 5’-CCGTGGTACTCTAAGCGTCG-3’)

At4g12480

(F 5’-ATGGCTTCAAAGAACTCAGC-3’; R 5’-ATAGGACAGTTTCCAGATGA-3’)

At3g14660

(F 5’-AAGGGTAATAGAAGGATGAA-3’; R 5’-AATCTATCTGGCTTGAACTC -3’)

At1g76680 (OPR1/2)

(F 5’-GACCAGACCGTGTTGGAATCAGGCT-3’; R5’-TGGCTAGAAACCATCGACCATAAG-3’)

At3g45140 (LOX2)

(F 5’- TATGTGAAACATTACTATCCTG-3’; R 5’-TCTGCGATGGGTATGTCTTAG-3’)

At5g42650 (AOS)

(F 5’- CATCAAGTTCATAACCGATTAG-3’; R 5’-CTCCGTCTCCGGTCCATTCGAC-3’)

At5g24780 (VSP1/2)

(F 5’-CGTTCCAGGGCTCATCGAACTC-3’; R 5’-ATTTWGCGTAGTAGGGAATACT-3’)

At2g06050 (OPR3)

(F 5’- ATTATCACTCGGGCTAGCCG-3’; R 5’- AGGTTCCTTTATAAGCCATT-3’)

At2g4000

(F 5’-GAAGAGGAAGATGGTATCATCAG-3’; R 5’-TTCCAGATGCGTAGATCCACGAT-3’)

At4g34135

(F 5’-TAAGCTTTTCTCTAGCAGAGGAG-3’; R 5’-gAAACTTGTACCGGAAGCTTCTA- 3’)

At1g63840

(F 5’- CGGTGGGATATTCTGAGCTA -3’; R 5’- GAAGAAACAGCAGAAGATTGAGA-3’)