Protein Composition Analysis of Polyhedra Matrix of Bombyx Mori Nucleopolyhedrovirus (Bmnpv)

Protein composition analysis of polyhedra matrix of Bombyx mori nucleopolyhedrovirus (BmNPV) showed powerful capacity of polyhedra to encapsulate foreign proteins

Zhong-Jian Guo1*, Meng-Han Yu1, Xian-Yun Dong1, Wei-Li Wang2, Ting Tian1, Xian-Yin Yu1 Xu-Dong Tang3*

1 Institute of Life Sciences, Jiangsu University, 301# Xuefu Road, Zhenjiang 212013, Jiangsu, P.R. China

2DepartmentofOccupationEvaluation, HebeiAnkangOccupationHealthTechnologyServiceCo.Ltd.,286#TianshanStreet,Shijiazhuang050000,Hebei,P.R.China

3 College of Biotechnology, Jiangsu University of Science and technology, 2# Mengxi Road, Zhenjiang 212018, Jiangsu, P.R. China

Correspondence and requests for materials should be addressed to Z-J. G. (email: ) or X-D. T. (email: )

Supplementary Tables

SupplementaryTable S1. Viral Proteins identified in the M1 section of the gel.

ORF / Protein / Size(amino acids) / Sequence / Sequence(s) of corresponding peptide(s)
1 / polyhedrin / 245 / MPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYIGTDSAEEEEILIEVSLVFKIKEFAPDAPLFTGPAY / 1MPNYSYTPTIGR12, 13TYVYDNKYYK22, 36HLVEHEQEEK45, 46QWDLLDNYMVAEDPFLGPGK65, 77SVKPDTMKLIVNWSGK92,85LIVNWSGK92, 85LIVNWSGKEFLR96, 93EFLRETWTR101, 132CYKFLAQHALR142, 135FLAQHALR142, 135FLAQHALRWEEDYVPHEVIR154, 143WEEDYVPHEVIR154, 155IVEPSYVGMNNEYRISLAK173, 155IVEPSYVGMNNEYR168, 174KGGGCPIMNIHSEYTNSFESFVNR197, 175GGGCPIMNIHSEYTNSFESFVNR197, 230IKEFAPDAPLFTGPAY245, 232EFAPDAPLFTGPAY245
66 / GP41 / 403 / MTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTLDAGESIWYNKCVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESLPSDSNIFQASFVLNSLPAYAQKFYNGGADMLGKDALAEAAKQLSLAVQYMVAESVTCNIPIPLPFNQQLANNYMTLLLKHATLPPNIQSAVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARIMSLKENVAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQNETLRRFIFQQINYNKDANAIIAAAAPNVTRPNTKGRTV / 6GNFYYNTPPPPLR18, 55SNSTNSVAIAPYNK68, 69SKEPTLDAGESIWYNK84, 71EPTLDAGESIWYNK84, 117DMCIDTNPINVNVVK131, 132RFESEETMIR141, 182FYNGGADMLGK192, 239HATLPPNIQSAVESR253, 325QPSMFQNATFLTSAANAVNSPAAHLTK351, 352NACQDSLTELAFQNETLR369, 371FIFQQINYNK380, 381DANAIIAAAAPNVTRPNTK399
88 / VP80 / 692 / MNDSNSLLITRLAAQILSRNIQTVDVIVDDKTLSLEEKIDTLTSMVLAVNGLPQSPPRVSSSDLAASSIKNNSKLVGNDFEMRYNVLRMAVVFVKRYPKYYNETTAGLVAEIENNLLQYQNYVNQGNYQNIQGYDSLLNKAEECYVKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDADAGEFQIFLNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEALRNNIELVQPESDAVRRIVIKMTQEIKDSTTPLYNIAMYKSDYDAIKNKNIKTLFDLYNDRLPINFLDTSATSPAVRKTPGKRSAEDDLLPTRSNKRANRPEISVISSEDEQEDDDVEDVDYEKESKRRKLEDEDFLKLKALEFSKDIVNEKLQKIIVVTDGMKRLYEYCNCKNSLETLPSAANYGSLLKRLNLYNLDHIEMNVNFYELLFPLTLYNDNDNSDKTLSHQLVNYIFLASNYFQNCAKNFNYMRETFNVFGPFKQIDFMVMFVIKFNFLCDMRNFAKLIDELVPNKQPNMRIHSVLVMRDKIIKLAFSNLQFQTFSKKDKTRNTKHLQRLIMLMNANYNVI / 201ADANISTAFSDPLPGSSAPR220, 221YMYESSESDTYMEPAR236, 237HTAEHYTDQDKDYNAAYTADEYNSLVR263, 346NNIELVQPESDAVR359, 371DSTTPLYNIAMYK383, 396TLFDLYNDR404, 405LPINFLDTSATSPAVR420, 617FNFLCDMR624, 625NFAKLIDELVPNK637
54 / 805 / MQRWPKYGGTDVNTRTVHDLLNTINTMSARIKTLERYEHALREIHKVVVILKPSANTHGFEPDALPALIMQFLSDFAGRDINTLTHNINYKYDYNYPQPPAPVPAMQPPPPPPFHQPPAPPQPPYYNNYPYYPPYPFSTQPPESNVAGVGGSQSLNQITLTNEEESELTALLKNMQTNMTWELVQNFVEVLIRIVRVHVVNNVTMINVISSITSVRTLIDYNFTEFIRCVYQKTNIRFAIDQYLCTNIVTFIDFFTRVFYLVTRTNFHFTTFDQLTQYSDELYTKIQTSILNSAAPLSPPTVETVNSDVVISNLQEQLKRERALMQQIVEQHRIANERVETMQSQYDELDLKYKEVFEDKSEFAQQKSENVQKIKQLERSNRELNGTVQKLRDENAEILSEIQLQKGDLDEYKNTNRQLNEDIHRLKKRMESTFDKNYVKTLNDKIESLEKQLDDTQNLNRELESSINETAQTYKFDAKDVMELKQSVSIKDQEIAMKNAQYLELSATYQQTVNELAATKNELSQIATTNQSLFAENEESKVLLEGALAFIDSFYQIIMQIEKPDYVPISKPQLTAQESIYQTDYIKDWLQKLRSKLSNADVANLQSVSEVNDLKTQIISIVPRNIVNRILKENYKVKVENVNAELMENVAVISAVSALVQQYEQSEKQNIRLRKDFEIKLNELQRLLDQNQTDFESISEFISRDPAFNRNLNDERFQNLKQQCDEMSSKYSALKTTKIKEMESIADQAVKSEMSKLNTQLDELNSLFVKYNRKAQDIFEWKTSMLKRYETLARTTAASVQPNVE / 16TVHDLLNTINTMSAR30, 339VETMQSQYDELDLK352, 391LRDENAEILSEIQLQK406, 462ELESSINETAQTYK475, 521NELSQIATTNQSLFAENEESK541, 597LSNADVANLQSVSEVNDLK615, 616TQIISIVPR624, 757LNTQLDELNSLFVK770
37 / ODV-E66 / 702 / MSTVLIIVVVVIFLICFWCLLNSSNNSNNKNDANRNNVFVDFDPLPFDAFDINTFDITNDDSIVAFQQNNIQELENFEQWFKNNLSYSFSQKAEKVVNPNRNWNDNTVFDNLSPWTSVPDFGTVCHTLIGYCVRYNNTSDALYQNPELAYNLINGLRIICSKLPDPPPHQQAPWGPVADWYHFTITMPEVFMNITIVLNETQHYDEAAALTRYWLGLYLPTAVNSMGWHRTAGNSMRMGVPYTYSQMLRGYLLAEIRQEQGIQEILNTIAFPYVTRGNGLHVDSIYIDHIDVRAYGYLINSYFTFAYYTYYFGDEVINTVGLTRAIENVGSPEGVVVPGVMSRNGTLYSNVIGNFITYPLAVHSADYSKVLTKLSKTYYGSVVGVTDRLAYYESDPTNNVQAPLWTMARRIWNRRGRIINYNANTVPFESGVILQSLNGIMRIPSGTTSTQSFRPAIGQTAIAKTDTAGAILVYAKFAEMNNLQFKSCTLFYDHGMFQLYYNIGVEPNSLNNTNGRVIVLSRDTSVNTNDLSFEAQRINNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQIISFQSMYTATASACYKLNVEGHSDSLRAFRVDSDENIYVNVGNGVKALFNYPWVMVKENNMVSFMSANEDTTIQFSVIMNSFTSIGEPALKYSPSNCFAYGNGFKLNDSTFDLQFIFEIV / 238MGVPYTYSQMLR249, 325AIENVGSPEGVVVPGVMSR343, 377TYYGSVVGVTDR388, 389LAYYESDPTNNVQAPLWTMAR409, 443IPSGTTSTQSFRPAIGQTAIAK464, 465TDTAGAILVYAK476, 477FAEMNNLQFK486, 523DTSVNTNDLSFEAQR537, 557VPITNINVPSLTVR570, 629ALFNYPWVMVK639
134 / 109 / MYSTSKINNARVVASQHDYDRDQIKRELNSLRRNVHDMCTRSGTSFDCNKFLRSDDMTPVVTTITPKRTADYKITEYVSDVKTIKPSNRPLVESGPLVQEAAKYGRCTV / 54SDDMTPVVTTITPK67, 74ITEYVSDVK82, 83TIKPSNRPLVESGPLVQEAAK103
75 / 259 / MIPLTPLFSRYKDSYLLYSFRLIDLLRASKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIELIEIALDKEKYGTDITFVDSYQQETAGADAAAVSNNMLMKNLMAYVIMTFHNHVNDYKWIQRNQKPPAHYERMTWGEYKKLLNLQ / 1MIPLTPLFSR10, 11YKDSYLLYSFR21, 13DSYLLYSFR21, 22LIDLLR27, 37LLSSQATYLYHFACLMK53, 128DKSSLDFVMQQLK140, 130SSLDFVMQQLK140
118 / 476 / MSGGGNLLTLERDHFKYLFLTSYFDLKDNEHVPSEPMAFIRNYLNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRTTVDILEFDTRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGCVLAGSAGFLFDDAYVDWNGVRMCAAPRLDNNMHPFRLYLLGEDMAKHFVDNNILPPHPSNAKTRKINNSMFMLKNFYKGLPLFKLKYTVVNSTKIVTRKPNDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIMKIITKFVIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPVMYDHESSYIFVSKDILQLKGTMNAFYAPKQRILSILAINRLFGATETIDFHPNLLVYRQSSPPVRLTGDVYVVDKNEKVFLVKHVFSNTVPAYLLIRGDYESSSELKSLRDLNPWVQNTLLKLLIPDSV / 28DNEHVPSEPMAFIR41, 94TTVDILEFDTR104, 188LYLLGEDMAK197, 198HFVDNNILPPHPSNAK213, 306FVIEENPAMNGEMSR320, 379ILSILAINR387, 431HVFSNTVPAYLLIR444, 458DLNPWVQNTLLK469
26 / Ubiquitin / 77 / MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY / 12TITAETEPAETVADLK27, 64ESTLHMVLR72
106 / P24 / 195 / MKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLIKNNKNYIHVFGLFKYLSNYNLNNKKRPKEYYVLKSIISDLLMGAQGKVFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNKKITFTTDTILENLKNIKDLMCLNK / 46IMSPFISNGGSTVWTNAAPSHK67, 74NYIHVFGLFK83, 104SIISDLLMGAQGK116, 158LQDMIQDLQSEYNK171, 158LQDMIQDLQSEYNKK172, 173ITFTTDTILENLK185
63 / VLF-1 / 379 / MNGFNVRNENNFNSWKIKIQSTPRFESVFDLATDRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEKNLMLKNVIDTILNFINDKIKMLNGDYVHDRGLIRGAIVFCIMLGTGMRINEARQLSVNDLNVLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEESGVEMERPRSNMIRHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNKYNIGLDETSSEEENNNNDDDAQHNRNSSGSSGESLLYYRNE / 25FESVFDLATDR35, 52YMFPKPFAPTTLK64, 216QLSVNDLNVLIK227, 216QLSVNDLNVLIKK228, 286LLEESGVEMERPR298, 304HYLSSNLYNSGVPLQK319
108 / PP34 / 315 / MKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTIPSKHRKMINDAGGSCHNTVKYMVDIYGASVLILRTPCSFADQLLSTFIANNYLCYFYRRRRSRSRSRSRSPHGRPRSRSRSRSRSRSRSSSPRQGRRQIFDALEKIRHQNDMLMNNVNQINLNQTNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASSITNINGTLNNLLTAIENLAGGGGGGGGGGGGNFNEADRQKLDLVHTLVNDIKNILTGTLTTK / 28MPLQAFQQLLFTIPSK43, 138QIFDALEK145, 180NQNVQLLAALETAK193, 292QKLDLVHTLVNDIK305, 294LDLVHTLVNDIK305
92 / 391 / MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMIIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKELVESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYYL / 15FFAFPHNLVEPQSDVGNK32, 161SNLRPIACEIPLSHFK176, 204IFCIFQYR211, 217YVINLPHEEIDNLYNK232, 301LNNFDQIMSVAPNK314
77 / ODV-E25 / 228 / MWKIVLLIVLLVLIYLYWTNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPNTGPLSEREVRELRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREMN / 70LSQMYIAEKPLSIDDIVK87, 93VGTNSIFLGTVYDYGVK109
94 / 424 / MRKYALLQKMIINELLFLNDNVNYATNKLFSKDQANGELQKLSAMLLNYKKSNKNVPNIKFDLKNLSFMLENTDKIDIIQFDDVKNYVQPAIVNLFESHNRSLNNYSTELNTLLENGNENLVPNITDIDNIKLSHMQLARLLCYTAVVESRNSKPWKAIFNNDTCVLTDSFFNYIMNILNMIKTNQGSLAHNLSVVYHIENIQMNLQNKLKPRSITIEIVDKDKFENKHSDIEVCYVMNNRLHPQDVNSQQTLMCSSFVELNALPFCLYNETLPDDQSMSVFNLYKFEQTKNNSVSKPSRLGNVMFVNSLIDKPITRETIVDIINSYHNACQNLKRSGHRVVGDYRAYERDYKLAALDFIILMLVTSITHRTLKYNMLNIHEKMFQELKTIVCKHSAAKLYDILINYDINKEPLNNFRYNYEVL / 76IDIIQFDDVK85, 86NYVQPAIVNLFESHNR101, 301LGNVMFVNSLIDKPITR317
87 / P45 / 387 / MCAYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSFENQANNTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVLSILNAQCNGFSTAANGNRLLLPFKNFMIKMGRNTNMKKVNKIASTVLIGFYLRHYLESLPNKAYPVAELELRNVCRFIMSKYSDENINLLIHKLKLIKIDICNVLMTEMIVPESFIRHIITKYQLDNEISLLIELNHDCFNK / 42YFNQSLIVDGK52, 53GLTFFTEFNK62, 264LLLPFK269, 308AYPVAELELR317, 327YSDENINLLIHK338
69 / P95 / 839 / MMSGVMLLVFAIFLIIAFTLIYLAIYFKFDETTYTKRLQVMIEYIKRTNADEPTPNVIGYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFDFLNQKLQPVDRIVHDRVRANDENPNEFILSGDKDDVTMKCPAYFNFDYAQLKCVPVPPCDNKPAGRYPMDERLLDTLVLNQHLDKDYSSNEHLYHPTFYLRCFANGAHAVEECPDNYTFDAKTRQCKVNELCENRPDGYILSYFPSNLLVNQFMQCVSGRHVVRECPANKIFDRNLMSCVEAHPCTFNGAGHTYITADISDAQYFKCLNNNESQLMTCINRIRNSDNQYECSGDSRCIDLPNGTGQQVFKHADDDISYNSGQLVCDNFEIISNIECDQSNVFENKLFMDKFRLNMQFPTEVFDGTACVPATADNVNFLRSTFAIENIPNHYDIDMQTSMLGKIEMIKQLVSKDLSLNNDAIFAQWLLYARDKNAIGLNPLTGEPIDCFGNNLYDVFDARRANVCKDLGKSVLKTLNFGDGEFLNVLSDTLTGKDEDYRQFCAISYENGQKIVENEHFQRRILTNILQSDVCANIYTTLYQKYTTLNPKYTTTPLQYNRILVKRPKNIEIYGANTRLKNATIPKNATTISPVFNPFENQPNNRQNDSISPLFNPFQTTDAVWYSEPDGDEAVAPPPTAPPPPSEPEPEPEPELPSPLILDNKDLFYSCHYSVPFFKLTSCHAENDVIINALNELRNNVKVDADCESAKDLSHVLNAYAYVGNGIGCRSAYDGDAIVVKKEAVPSHVYANLNTQSNDGVKYNRWLHVKNDQYMACPEELYDNDEFKCNVESDKLYYLDNLQEDSIV / 619NATTISPVFNPFENQPNNR637, 711LTSCHAENDVIINALNELR729
17 / 129 / MDGSVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISELQKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVINAETKTKLGHINVSLNQNDPNVLILTVTLTS / 54SVDVGSISELQK65
72 / VP39 / 350 / MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETGLVASVPDGPELYNPIRSSDIMKSQPNRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLRNDFISRANPNATLGGGVGALAGPAPGVVLGEAGGGVAA / 62MVLPIFDEDDNQFK75
27 / 39K / 277 / MVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGKKMADRSTSSSSSDNAAIPASKKRQTAVLTNANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKTVALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQDTNMSE / 50NINYILNVMPVMQDER65
48 / 83 / MLPKYYQNLPYNGKRIFEKFYDRSLQKYKSTHIATKLACCAVRKKYILIDCKWQPRPDANNSDTTTTNTEDSTTDTETEDEIA / 5YYQNLPYNGK14
23 / SOD / 151 / MKAICIISGDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK / 28ISGYLLNLPR37, 114SLVVHTDKDDLGLTEHPLSK133
70 / VP15 / 126 / MNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKTKEIKEYYYIKVECYVNN / 57TYNLTLQQYNEALNQCALNDSR78
29 / 217 / MRNAAGLFMIIEPDKAVLLCARRAYRSANAPAADINDTFLEKISIPRGHRDCCDAKVYETAVREFVEETGRFFDSAFIYKFPFTLQWKDDGVTYKYLIYVGVVRGNLIDVNAKPNTYTVKLLPGTFGNDYRIMLKPRRFNCEITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHALRRV / 16AVLLCARR23
62 / 85 / MNLYLLLGALTIFSLVYDKKENSIFLYLLILFLVFIIVVSPAIISKNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID / 67LEIEQALDAILNK79
10 / 356 / MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAAVTCHIDDDDYKSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNGAYRLNGQIDLHLNRHIKCIKTQYNDEFDLVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLLGNEYHVLVSSLQRVLNDQLMCLLKDIFTNKFDYKIKRRLNHLKRLFANLPAESYNSCVNDLTDMYLYKEQNETITNFVKKILDISGPDLGCRKLMRIYLNTDTFRGQLPAYLTHYVNYPHKNLCDQNWKRFMSCIFSLY / 213NFSLLGNEYHVLVSSLQR230
93 / 67 / MDNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKLMCKENMPGEHDHKFYNRGYNKENKYK / 1MDNYSLHNFYNNNR14
84 / P6.9 / 65 / MVYRRRRRSSTGATYGLTRRRRSSAGITRRRRSSGYRRRPGRPRTYRRSRSRSLTSRRSYRTRYY / 23SSAGITRR30
53 / Polymerase / 986 / MKIYSYNELKTRFAEYAKPGEFSITSADTFRIIRLHYDEKQGCLFAFCNTNIEKRVLQFYFKVKLNLYSYKQCYDKHIFPSCRNKCISYTTFVAPGVEGNCLNKINVIKYERNKAAPSDNAACLDKFLHNVNRVHMQTPFVEGAYMRFKKTQRCQNNYVGGSTTRMFNLQHFYEDFELVDEMTLTSGIMPVLSCYDIETHSDGHNMSKASVDCIMSIGFVVYKNDEYARFCFMYHKLPTEIPETHDDDTHVVMFQNEVDMITAFFDMIKITNPDVILDFNGDVFDLPYILGRLNKTKMLLKRYDLPAAAPTTKLFINKLGNKVDTYYFNYYIHIDLYKFFSSDSNQHKVENFQLNTISSYYLGENKIDLPWTEMVKMYNTRRLDVIAKYNVQDCMLPIKLFVKLKMADSVYSQCILHRLCTDDVICNISHLISVACFYAAITNTRINESTGKEEPDPYFFNKNDLSIISGQFNADKATAGISNLKRKLTPLKNIPKDAINLGPANQTVKYKGGKVLQPRASIYKNAFSLDFNSLYLTIMIAICACLSNLVLCEDGNVYLNHNSRAIVVKLLLKLLSERCKFKKNRDNQSESAFLYDLYDQKQNSVKRTANSIYGYYGIFYKVLANYITRVGRNQLRRAISLIEGLSNDPEILKKFNLNSIGFKVVYGDTDSTFVLPTFNYNEIFDETDTLKQICTHVETRVNSSFTDGYKMAFENLMKVLIILKKKKYCYLNSENKIVYKGWLVKKDMPVFMRIAFRTAVEQILRHLDINKCLQSLQASFYEYYDEFAKSKPMTDYSFSMTYNDNPGKKRKSADDNNEGPSPKRRVITVARHCREILVNKGTDFVPGNGDRIPYLLIDIEGKVTEKAYPLRLFDPVKMRISWIKHMGILCTFMNELLEIFGDEQKDNLAKCFTAIMQKYMQNQLYDRKEPVLVKINQKKCSVKRKRDDDDDNNDDDDDDGCDSSDSENDTQCANNTYKFCLYKIKK / 477ATAGISNLK485, 493NIPKDAINLGPANQTVK509
116 / ME53 / 451 / MNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLERSISSSIVSKKPVVNRKDGYFVPPEFGNKLESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLKFSTNYIMGYINSKDMRMTGKFASSSVKYKKTTEQHMSDSRCTTCNYRFKDNTRAWFLYVVVHIEKPLDDSDRIDICCQKCYLYHNVPKTSYEIYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVKELKIDDHNCKVFEIIRRIIRNHKEPNERIQTIDLSTTGGLVLRETYTNIVLQRYRSMCTRPDAADDVNCFILQEPSEMMAALQDNRFSGIKGTVFATVKVKKFTEVLDGGAITFPSRPTINNYCKLCKKTKLYYKNPVLYCTKCGFTNVYHFPEYSKLVYYSKAIKNFEMHNEMIIYYDLKMYKKLINIVNNNV / 443LINIVNNNV451
71 / CG30 / 267 / MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCIRKIRKRKKIPCPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYKCITNATTITTNVTINVD / 141LQIDIAEQTQLNIK154
95a / 56 / MYFTSRFLSALGTSNTLAVRCIMLKINSADAELYRPRFIFCATRHFVRHTTLFTLN / 7FLSALGTSNTLAVR20
14 / 673 / MDGVKLLGTCALIILLSTTNTVVGRDRITFTPIEDSAGLVFERMYGLRHHTDERFVFVKKFNFASVLQELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFLTPLNKNFITYSVEDSISSNEVLDNIDLEYDDGVDFDVYDEYEPSSHWSNMTVSDAKALLQNPPKDRVMFLDTVTTNNVSSKYEEYIDCIVSNRTVENECMFLANMMNVLNDKLDDAAALAKMLKRIVKQTRKNKLNISNTVIDDDTLLTEMKKLVQILYNQNRMWVVDFNRDMNSYFDLSQAYKLHLYVDLNTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDNFRQDCQEFTGYNEFLCPETEPIATMNSKVCEIEMFMGRYRDVVYGMCDIRVANYNPKKAYVNTLVDYRKWLYIFPNTNVSVHYYCKDALVQVNTKVLPGVGVMFSTMEQTCSIGITHDVTITVDSRFYVSHSTTYWPKKKFNFNNYIDQNMLLEKATTASFIQTVDNFTRPVLLQLFNKFHIEDYTSASQHSFHQSKIYTNSATPDEDSQDDSNITVVIIIAIVAATFLFCSLLLFLFCCIKKRCHQSNNVTVQYKNNDEFVTICNNLENNRAYINLTNEYDDSDDMPKPLDLLKDDKPLLYPMIIERIK / 179VMFLDTVTTNNVSSK193
4 / 99 / MSLAAKLIIYNYYAKYNEVHDVYGESYHHHRIVQEYLSESYVNDMSCIERDVTAMRRLKIGSCTFDEAVKMIDAGDSIKSLSHWFSTGETTGIDDNVRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMRNGKLLHIANVFNPNSDAVGWWYNKFCVITYVHRIMHRSVPAELVPRLSEAVKKFIRLSKSDYDDRLHVDESYNCPRVIAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCYTVIKDFGRQCIDVYRDLKDVFDLLHAHSMSDKDKNSLMDLLCVMDCEEIDVDCFYYIFESFLNNKHLQ / 248LSCMHILFQYLRGK261
124 / ODV-E56 / 375 / MSFFTNLRRVNKLYPNQASFLADNTRLLTSTPAGFTNVLNAPSVRNLGNNRYQPGYQLSNNRFVSTSDINRITRNNDVPNIRNVFQGISDPQINSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHNHMRTLKVAGVGILLAGGGYLLFTASTLVQDIINAINRTGGSYYVQGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDLPAGQTIMCIEPYSFSDLVGDLGLDWLLGREGLVGKSSNSSDGIRNKIMPIIMMIGAVLFLGLILYFIYRYMTKGGGGGGGSGGAPTPIVIMQHPASTTAPRR / 131TPEGVQNALQQNPRLHNHMR150
104 / Cathepsin / 323 / MNKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGIIKYCFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVIY / 102VILLDQPPGK111

SupplementaryTable S2. Host proteins identified in the M1 section of the gel.

Protein / Pfam domain / Size
(amino acids) / Sequence / Sequence(s) of corresponding peptide(s)
BGIBMGA002381-PA / HSC/HSP70 / 649 / MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGGVPGGMPGFPGGAPGAGGAAPGAGGAGPTIEEVD / 37TTPSYVAFTDTER49,138TVQNAVITVPAYFNDSQR155, 160DAGTISGLNVLR171, 172IINEPTAAAIAYGLDK187, 302FEELNADLFR311
BGIBMGA011805-PA / Ubiquitin carboxyl-terminal hydrolase / 665 / MPASICDPVTSALRLSLTQDDSQSSSLLDSRLYSSTKSVLLSKIDFEESGDYQSNVLDGLKSKYVVIRPKKTIHDPKPFKKDSASNSQCLENSKSVEDGLPKPKRILFPLEKVQLGWQSPWAAGAGMQNVGNTCYLNSTLQALFHVPALANWLMSESTHTEKCNQQEACVICGMRASLMATQKGGGAPIKPWQVYSKLRLICRHLTPGRQEDAHEFLRYLVEAMEKCYLLRFINSDKLDQYSKETTPLNQILDNSSEDICTSVATTSGVIYGPQLPESILNREKSPLKLTFYRNDERKPMLNSTSTEAPKPIILNSTLSNSENSSNVINSEPWVVKQNGEIEKVIQTPKTINGIDKGQKVDDEKRISFVIKRQNNEDVQIKPKACKSDSNMKLVANNVKVADQPVSISKLLKPFKSPLEKLEEQMNKNDGGELIQKNDSSSSRLVPYDSESSGDERGDRNGDDPTKRIPGKDAGRKPKPSRCESPRRLVVTTKSSWTVSSEKSGPLLSPSLNGDTNKKVKEERGESSQQSPHTSVSSMSPLSDRGELSPGAVTRALQTASHRGYGAPVAAWSGAHSALSRQVFEERREERKRAAESIDDMDCGRVKKFKNFHHFNRFNNNRNGYNPFQEKQNKLHWGGGNFKYRNERRSHHFNKHHNNKYKRFNR / 15LSLTQDDSQSSSLLDSR31, 232FINSDKLDQYSK243
BGIBMGA005576-PA / Actin / 344 / MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDWPEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF / 120MTQIMFETFNTPAMYVAIQAVLSLYASGR148, 208SYELPDGQVITIGNER223, 305KYSVWIGGSILASLSTFQQMWISK328, 306YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR341
BGIBMGA003126-PA / Nup93/Nic96 / 820 / MGDEGFSKLLQQAEQLTTEIEGNEELPRVERSLGQVLEASQELYSRVIQSGANDIQAHLLFGSKGIDLNQISQKLETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDEVNKNSLQTTEDQKWEHMLSEWNKEKIKLMNAMIGPSQNWLDLKRTPEPPSIADAPKKFGHSMLDNVEAAYARQVHQYNKYVFQGAKSRTALHQKFAQVAEDFNDPKVKEMWDIINTMANIPALVRDEDPLKARGNPAIQQCLVAQGKKYLQKRYKLYMNDVVRANPAAALRGGEPGTYPLVRGFVGLRLQGQNSQGFTDGVIDERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLSDKLQTAINFQYRIQVRNSTDPYKRAVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANETESFSYSDLQKLILEEYGETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTEDPPPLRRLNLARLLLLYVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRDYELLFGRIDANSSLRSPGLVDQFNNPHIDSKVIALNVAEQLVNKGLFEDAITMYDIADNLEKVVELSCVLLAQVVNSGGGETGVRGRLAKRCELTDARLRASTETLPPSLLHAYTKLCKLCIFFDQFHADNYDAALETLGECEVVPLNASELEARVAAARSGRGELLRCLPAVLRALCTVLLAHRQRLRANEHSHPLSQQNNKQLEWLREQAEVLNTFAGNIAYRMPGDTYSQLAQMQILMH / 32SLGQVLEASQELYSR46, 427SANETESFSYSDLQK441, 610VIALNVAEQLVNK622
BGIBMGA011746-PA / DEAD/DEAH box helicase / 569 / MRIDNNGNVFVTSGVLSASAKQCIDFFLCTRSGNWNNSRGNGGSKFGGGNKFGDNSSRFGNGGNRFGGSGGFGGKKEFSGGQNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADRCGGGGGGWNRNRFGGGGRGGGGSFKRGSNFGKSSQRGGSGYKRFDDY / 188TLAYILPAIVHINNQPPIR206, 208GDGPIALVLAPTR220, 317QTLMWSATWPK327
BGIBMGA000808-PA / XRN 5'-3' exonuclease / 322 / MGVPAFFRWLSRKYPSVIVECVEQKPTDVDGQLVYVDSSLPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETQEKIEEVARIRNELQAKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVVRSDPAFGNQDNFIFVRLSVLREYLERELQESVLKV / 97LLYMAIDGVAPR108, 289SDPAFGNQDNFIFVR303
BGIBMGA005650-PA / CAF1 family ribonuclease / 479 / MEVIRKNFKEALPLAAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTVPIECKLRENLTERQKTYSKGKDSIKVPDEHKDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKLVVGHNMLLDVMHTLNHFFQPLPAEYTQFKEFTHCMFPHILDTKYMSSLPPFKDKVNSSILKHLLATLSAAPFSLPKVVSDEGRGYSQLHEKHHEAGYDAYVTGLCFLAMHSHLANMRGDDTTRFLSITSPLIKPFLNKVFLSRTAHQDSPFINLAGPEPLPPRDHVFHLAFPREWQRNEITQLFSPFGPITVQFIDDTSAFVALARREQATSVSKALAKHSKITLTSYYKYKKINDTPSSKITTKTAEAANNDCKKTYAILIISLVVILIAFFLRGFNKLY / 39DVSMFDTPEEYYK51, 78HYMNDAYNFYLFPR91, 322FLSITSPLIKPFLNK336
BGIBMGA011581-PA / Small ubiquitin
-related modifier(SUMO) / 91 / MADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGGVSLV / 16VLGQDNAIVQFK27

SupplementaryTable S3. Viral proteins identified in the M2 section of the gel.

SupplementaryTable S4. Host proteins identified in the M2 section of the gel.

Protein / Pfam domain / Size(amino acids) / Sequence / Sequence(s) of corresponding peptide(s)
BGIBMGA002381-PA / HSC/HSP70 / 649 / MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGGVPGGMPGFPGGAPGAGGAAPGAGGAGPTIEEVD / 37TTPSYVAFTDTER49, 89HWPFEVVSDGGKPK102, 113TFFPEEVSSMVLTK126, 138TVQNAVITVPAYFNDSQR155,
160DAGTISGLNVLR171, 172IINEPTAAAIAYGLDK187, 221STAGDTHLGGEDFDNR236, 237MVNHFVQEFK246, 302FEELNADLFR311, 329AQIHDIVLVGGSTR342, 349LLQDFFNGK357, 362SINPDEAVAYGAAVQAAILHGDK384, 424QTQTFTTYSDNQPGVLIQVFEGER447, 459FELTGIPPAPR469, 540NALESYCFSMK550, 598ELEGIYNPIITK609
BGIBMGA011746-PA / DEAD/DEAH box helicase / 569 / MRIDNNGNVFVTSGVLSASAKQCIDFFLCTRSGNWNNSRGNGGSKFGGGNKFGDNSSRFGNGGNRFGGSGGFGGKKEFSGGQNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADRCGGGGGGWNRNRFGGGGRGGGGSFKRGSNFGKSSQRGGSGYKRFDDY / 86RPDWDSVSLQPFNK99, 188TLAYILPAIVHINNQPPIR206, 208GDGPIALVLAPTR220, 221ELAQQIQQVAADFGHTSYVR240, 296MLDMGFEPQIR306, 457YVINFDYPNSSEDYIHR473
BGIBMGA011965-PA / DEAD/DEAH box helicase / 628 / MTIDVVAVVEEVGVAEGEDPAAVVGVATGRKSADLVDLAEVVVGTVDAAVGMAAVEDETAAGVLGEWGIGMIAPISKMISLAKNFYVPHPNVQRRTQSEIEAYRSQHQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLIDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELSANHNILQIVDVCEEWEKNDKLITLLTEISSEEETKTIIFAETKRRVDDICKAINRAGWRALAIHGDKNQQDRDYVLNQFRHHAAAILVATDVAARGLDVEDVKFVINYDYPNNSEDYVHRIGRTGRSQNTGTAYTLFTPNNSAKARDLMSVLQEANQVVNPKLLELAQCGMGFKGKFGRSRYRDDGGRGRDGGSRGGRGSRGGGRGGYGDRGPKDCAGRYDAVRSCSGKLVTLIQLRLKIMFRGGMQVVRRGLVNTLHQMSRELISQSKKFLGACAGHNIDDGPASSFNCGAT / 139QGFPNPTPIQAQGWPIALSGR159, 172TLAYILPAIVHIINQPR188, 205ELAQQIQQVANEFGQSIHVR224, 280MLDMGFEPQIR290, 439FVINYDYPNNSEDYVHR455
BGIBMGA011805-PA / Ubiquitin carboxyl-terminal hydrolase / 665 / MPASICDPVTSALRLSLTQDDSQSSSLLDSRLYSSTKSVLLSKIDFEESGDYQSNVLDGLKSKYVVIRPKKTIHDPKPFKKDSASNSQCLENSKSVEDGLPKPKRILFPLEKVQLGWQSPWAAGAGMQNVGNTCYLNSTLQALFHVPALANWLMSESTHTEKCNQQEACVICGMRASLMATQKGGGAPIKPWQVYSKLRLICRHLTPGRQEDAHEFLRYLVEAMEKCYLLRFINSDKLDQYSKETTPLNQILDNSSEDICTSVATTSGVIYGPQLPESILNREKSPLKLTFYRNDERKPMLNSTSTEAPKPIILNSTLSNSENSSNVINSEPWVVKQNGEIEKVIQTPKTINGIDKGQKVDDEKRISFVIKRQNNEDVQIKPKACKSDSNMKLVANNVKVADQPVSISKLLKPFKSPLEKLEEQMNKNDGGELIQKNDSSSSRLVPYDSESSGDERGDRNGDDPTKRIPGKDAGRKPKPSRCESPRRLVVTTKSSWTVSSEKSGPLLSPSLNGDTNKKVKEERGESSQQSPHTSVSSMSPLSDRGELSPGAVTRALQTASHRGYGAPVAAWSGAHSALSRQVFEERREERKRAAESIDDMDCGRVKKFKNFHHFNRFNNNRNGYNPFQEKQNKLHWGGGNFKYRNERRSHHFNKHHNNKYKRFNR / 15LSLTQDDSQSSSLLDSR31
BGIBMGA005650-PA / CAF1 family ribonuclease / 479 / MEVIRKNFKEALPLAAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTVPIECKLRENLTERQKTYSKGKDSIKVPDEHKDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKLVVGHNMLLDVMHTLNHFFQPLPAEYTQFKEFTHCMFPHILDTKYMSSLPPFKDKVNSSILKHLLATLSAAPFSLPKVVSDEGRGYSQLHEKHHEAGYDAYVTGLCFLAMHSHLANMRGDDTTRFLSITSPLIKPFLNKVFLSRTAHQDSPFINLAGPEPLPPRDHVFHLAFPREWQRNEITQLFSPFGPITVQFIDDTSAFVALARREQATSVSKALAKHSKITLTSYYKYKKINDTPSSKITTKTAEAANNDCKKTYAILIISLVVILIAFFLRGFNKLY / 39DVSMFDTPEEYYK51, 173EREWEDFEDAVGFSK187
78HYMNDAYNFYLFPR91
BGIBMGA008447-PA / Nuclear transport factor 2; Nuclear RNA export factor 1 / 613 / MPKRGGGRNRNWKADTDHFEHDDRVNSVPRHVSFKPGAKGKNKFRTWKNPLALLDDDIDMGSSALQGPVRKSSFRGRGRMYSPAPQGSHGHTKKKFIPGVLPWYQIIIPYGAKHEKDVILRALLGFLSPDIFIPHYYKVNGNAAVFYVDDVKTAEKLYNADRKITMSDGFKLIVIVRNAVPNMAIDAAMKEKMKLTMAKRYNATTKALDLTKFHADPDLEDIFCALFRPMIMLAAIDIIAENIPDIEALNLNDNKLHGLQHLKVLSSKLKNLKILYMGDNRIPFLGSLDPIRSLPLVELYLKGNPLVNRFHDHEIYISDVRKKFPKLTRLDGADLPPAIGFDVAEDMGLPPRQQSFLVDPAGQDLVREFLTQYYAIYDSESRQPLLEAYHENATMSMAANYLTNDSRNSTTTRLNSYISNSRNLTRITERESRRRYLRTGKLQVVSFLSDLPKTTHDLMGFAVDLLVFTPAMIVLTMNGVFKETNTPNNPMRSFHRTFVIVSNANGGFSIINDMLYITNTTKEQEDKAFSTGTVEPIPPTPAPTPTPTPTLAAGTPDDSQKMQLLNMLGQQTGMNEHWSINCLQETGWDLQRAMFIFNQLHSEGKIPPEAFVK / 96FIPGVLPWYQIIIPYGAK113, 442LQVVSFLSDLPK453
BGIBMGA011581-PA / Small ubiquitin-related modifier(SUMO) / 91 / MADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGGVSLV / 16VLGQDNAIVQFK27

SupplementaryTable S5. Viral proteins identified in the M3 section of the gel.

ORF / Protein / Size(amino acids) / Sequence / Sequence(s) of corresponding peptide(s)
1 / polyhedrin / 245 / MPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYIGTDSAEEEEILIEVSLVFKIKEFAPDAPLFTGPAY / 1MPNYSYTPTIGR12, 13TYVYDNK19, 13TYVYDNKYYK22, 20YYKNLGCLIK29, 36HLVEHEQEEK45, 36HLVEHEQEEKQWDLLDNYMVAEDPFLGPGK65, 46QWDLLDNYMVAEDPFLGPGK65, 46QWDLLDNYMVAEDPFLGPGKNQK68, 69LTLFKEIR76 77SVKPDTMKLIVNWSGK92, 85LIVNWSGK92, 85LIVNWSGKEFLR96, 93EFLRETWTR101, 102FVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYK134, 132CYKFLAQHALR142, 135FLAQHALR142, 135FLAQHALRWEEDYVPHEVIR154, 143WEEDYVPHEVIR154, 143WEEDYVPHEVIRIVEPSYVGMNNEYR168, 155IVEPSYVGMNNEYRISLAK173, 155IVEPSYVGMNNEYR168, 174KGGGCPIMNIHSEYTNSFESFVNR197, 175GGGCPIMNIHSEYTNSFESFVNR197, 230IKEFAPDAPLFTGPAY245, 232EFAPDAPLFTGPAY245
102FVEDSFPIVNDQEVMDVYLVANLKPTRPNR131, 198VIWENFYKPIVYIGTDSAEEEEILIEVSLVFK229
66 / GP41 / 403 / MTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTLDAGESIWYNKCVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESLPSDSNIFQASFVLNSLPAYAQKFYNGGADMLGKDALAEAAKQLSLAVQYMVAESVTCNIPIPLPFNQQLANNYMTLLLKHATLPPNIQSAVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARIMSLKENVAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQNETLRRFIFQQINYNKDANAIIAAAAPNVTRPNTKGRTV / 6GNFYYNTPPPPLR18, 19YPSNPATAIFTNAQTYNNAPGYVPPTTR46, 55SNSTNSVAIAPYNK68, 69SKEPTLDAGESIWYNK84, 71EPTLDAGESIWYNK84, 98CNDMSELSPLMIHFINTIR116, 117DMCIDTNPINVNVVK131,133FESEETMIR141, 182FYNGGADMLGK192, 239HATLPPNIQSAVESR253, 297ENVAFLAPLSASANIFNYMAELATR321, 325QPSMFQNATFLTSAANAVNSPAAHLTK351, 352NACQDSLTELAFQNETLR369, 371FIFQQINYNK380, 381DANAIIAAAAPNVTRPNTK399
108 / PP34 / 315 / MKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTIPSKHRKMINDAGGSCHNTVKYMVDIYGASVLILRTPCSFADQLLSTFIANNYLCYFYRRRRSRSRSRSRSPHGRPRSRSRSRSRSRSRSSSPRQGRRQIFDALEKIRHQNDMLMNNVNQINLNQTNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASSITNINGTLNNLLTAIENLAGGGGGGGGGGGGNFNEADRQKLDLVHTLVNDIKNILTGTLTTK / 28MPLQAFQQLLFTIPSK43, 148HQNDMLMNNVNQINLNQTNQFLELSNVMTGVR179, 180NQNVQLLAALETAK193, 221LAEQLLEAINTMQQTQR237, 292QKLDLVHTLVNDIK305, 294LDLVHTLVNDIK305, 306 NILTGTLTTK315
92 / 391 / MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMIIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKELVESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYYL / 15FFAFPHNLVEPQSDVGNK32, 58FNSVLVYR65, 79KTASATIVYWNPLMPITEIGAGETR103, 80TASATIVYWNPLMPITEIGAGETR103, 104VFSVLLTNNLFYCNTMIIQHENPK127, 128CPIEFTYPETDMQSACSALLK148, 161SNLRPIACEIPLSHFK176, 203RIFCIFQYR211, 204IFCIFQYR211, 217YVINLPHEEIDNLYNK232, 263QAQSLLGIPDYSQTVVDFVK282, 287IIFPYQLVPNVIIK300, 301LNNFDQIMSVAPNK314, 361TNINFVTQR369, 370VLIDGGFSSGVTVTPIK386
37 / ODV-E66 / 702 / MSTVLIIVVVVIFLICFWCLLNSSNNSNNKNDANRNNVFVDFDPLPFDAFDINTFDITNDDSIVAFQQNNIQELENFEQWFKNNLSYSFSQKAEKVVNPNRNWNDNTVFDNLSPWTSVPDFGTVCHTLIGYCVRYNNTSDALYQNPELAYNLINGLRIICSKLPDPPPHQQAPWGPVADWYHFTITMPEVFMNITIVLNETQHYDEAAALTRYWLGLYLPTAVNSMGWHRTAGNSMRMGVPYTYSQMLRGYLLAEIRQEQGIQEILNTIAFPYVTRGNGLHVDSIYIDHIDVRAYGYLINSYFTFAYYTYYFGDEVINTVGLTRAIENVGSPEGVVVPGVMSRNGTLYSNVIGNFITYPLAVHSADYSKVLTKLSKTYYGSVVGVTDRLAYYESDPTNNVQAPLWTMARRIWNRRGRIINYNANTVPFESGVILQSLNGIMRIPSGTTSTQSFRPAIGQTAIAKTDTAGAILVYAKFAEMNNLQFKSCTLFYDHGMFQLYYNIGVEPNSLNNTNGRVIVLSRDTSVNTNDLSFEAQRINNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQIISFQSMYTATASACYKLNVEGHSDSLRAFRVDSDENIYVNVGNGVKALFNYPWVMVKENNMVSFMSANEDTTIQFSVIMNSFTSIGEPALKYSPSNCFAYGNGFKLNDSTFDLQFIFEIV / 135YNNTSDALYQNPELAYNLINGLR157, 213YWLGLYLPTAVNSMGWHR230, 258QEQGIQEILNTIAFPYVTR276, 238MGVPYTYSQMLR249, 325AIENVGSPEGVVVPGVMSR343, 344NGTLYSNVIGNFITYPLAVHSADYSK369, 377TYYGSVVGVTDR388, 389LAYYESDPTNNVQAPLWTMAR409, 418IINYNANTVPFESGVILQSLNGIMR442, 443IPSGTTSTQSFRPAIGQTAIAK464, 465TDTAGAILVYAK476, 477FAEMNNLQFK486, 523DTSVNTNDLSFEAQR537, 538INNNNSSEGTTFNGVVCHR556, 557VPITNINVPSLTVR570, 629ALFNYPWVMVK639, 674YSPSNCFAYGNGFK687
87 / P45 / 387 / MCAYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSFENQANNTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVLSILNAQCNGFSTAANGNRLLLPFKNFMIKMGRNTNMKKVNKIASTVLIGFYLRHYLESLPNKAYPVAELELRNVCRFIMSKYSDENINLLIHKLKLIKIDICNVLMTEMIVPESFIRHIITKYQLDNEISLLIELNHDCFNK / 30DEIDSLCFLFSK41, 42YFNQSLIVDGK52, 53GLTFFTEFNK62, 69SSFENQANNTDNIHNVK85, 86NIFSIFLRDEFIK98, 244VLSILNAQCNGFSTAANGNR263, 264LLLPFK269, 287IASTVLIGFYLR298, 299HYLESLPNK307, 308AYPVAELELR317, 327YSDENINLLIHK338, 344IDICNVLMTEMIVPESFIR362
118 / 476 / MSGGGNLLTLERDHFKYLFLTSYFDLKDNEHVPSEPMAFIRNYLNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRTTVDILEFDTRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGCVLAGSAGFLFDDAYVDWNGVRMCAAPRLDNNMHPFRLYLLGEDMAKHFVDNNILPPHPSNAKTRKINNSMFMLKNFYKGLPLFKLKYTVVNSTKIVTRKPNDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIMKIITKFVIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPVMYDHESSYIFVSKDILQLKGTMNAFYAPKQRILSILAINRLFGATETIDFHPNLLVYRQSSPPVRLTGDVYVVDKNEKVFLVKHVFSNTVPAYLLIRGDYESSSELKSLRDLNPWVQNTLLKLLIPDSV / 17YLFLTSYFDLK27, 28DNEHVPSEPMAFIR41, 70HLVGSTSTNIFK81, 94TTVDILEFDTR104, 105MYIKPGTHVYATNLFTSNPR124, 126MMAFLYAEFGK136, 188LYLLGEDMAK197, 198HFVDNNILPPHPSNAK213,250KPNDIFNEIDK260, 261ELNGNCPFIK270, 306FVIEENPAMNGEMSR320, 367GTMNAFYAPK376, 379ILSILAINR387, 388LFGATETIDFHPNLLVYR405, 431HVFSNTVPAYLLIR444, 458DLNPWVQNTLLK469
134 / 109 / MYSTSKINNARVVASQHDYDRDQIKRELNSLRRNVHDMCTRSGTSFDCNKFLRSDDMTPVVTTITPKRTADYKITEYVSDVKTIKPSNRPLVESGPLVQEAAKYGRCTV / 54SDDMTPVVTTITPK67, 83TIKPSNRPLVESGPLVQEAAK103
94 / 424 / MRKYALLQKMIINELLFLNDNVNYATNKLFSKDQANGELQKLSAMLLNYKKSNKNVPNIKFDLKNLSFMLENTDKIDIIQFDDVKNYVQPAIVNLFESHNRSLNNYSTELNTLLENGNENLVPNITDIDNIKLSHMQLARLLCYTAVVESRNSKPWKAIFNNDTCVLTDSFFNYIMNILNMIKTNQGSLAHNLSVVYHIENIQMNLQNKLKPRSITIEIVDKDKFENKHSDIEVCYVMNNRLHPQDVNSQQTLMCSSFVELNALPFCLYNETLPDDQSMSVFNLYKFEQTKNNSVSKPSRLGNVMFVNSLIDKPITRETIVDIINSYHNACQNLKRSGHRVVGDYRAYERDYKLAALDFIILMLVTSITHRTLKYNMLNIHEKMFQELKTIVCKHSAAKLYDILINYDINKEPLNNFRYNYEVL / 10MIINELLFLNDNVNYATNK28, 42LSAMLLNYK50, 65NLSFMLENTDK75, 76IDIIQFDDVK85, 86NYVQPAIVNLFESHNR101, 141LLCYTAVVESR151, 184TNQGSLAHNLSVVYHIENIQMNLQNK209, 229HSDIEVCYVMNNR241, 301LGNVMFVNSLIDKPITR317, 318ETIVDIINSYHNACQNLK335, 400LYDILINYDINKEPLNNFR418
106 / P24 / 195 / MKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLIKNNKNYIHVFGLFKYLSNYNLNNKKRPKEYYVLKSIISDLLMGAQGKVFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNKKITFTTDTILENLKNIKDLMCLNK / 46IMSPFISNGGSTVWTNAAPSHK67, 74NYIHVFGLFK83, 84YLSNYNLNNK93, 104SIISDLLMGAQGK116, 126TQLCAIQESLNEAISTLNVHAAANSPAPDINK157, 158LQDMIQDLQSEYNK171, 158LQDMIQDLQSEYNKK172, 173ITFTTDTILENLK185
26 / Ubiquitin / 77 / MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY / 12TITAETEPAETVADLK27, 30IADKEGVPVDQQR42, 64ESTLHMVLR72
75 / 259 / MIPLTPLFSRYKDSYLLYSFRLIDLLRASKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIELIEIALDKEKYGTDITFVDSYQQETAGADAAAVSNNMLMKNLMAYVIMTFHNHVNDYKWIQRNQKPPAHYERMTWGEYKKLLNLQ / 1MIPLTPLFSR10, 11YKDSYLLYSFR21, 13DSYLLYSFR21, 22LIDLLR27, 37LLSSQATYLYHFACLMK53, 128DKSSLDFVMQQLK140, 130SSLDFVMQQLK140, 215NLMAYVIMTFHNHVNDYK232
63 / VLF-1 / 379 / MNGFNVRNENNFNSWKIKIQSTPRFESVFDLATDRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEKNLMLKNVIDTILNFINDKIKMLNGDYVHDRGLIRGAIVFCIMLGTGMRINEARQLSVNDLNVLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEESGVEMERPRSNMIRHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNKYNIGLDETSSEEENNNNDDDAQHNRNSSGSSGESLLYYRNE / 8NENNFNSWK16, 25FESVFDLATDR35,52YMFPKPFAPTTLK64, 168NVIDTILNFINDK180, 216QLSVNDLNVLIK227, 286LLEESGVEMERPR298, 304HYLSSNLYNSGVPLQK319, 364NSSGSSGESLLYYR377
88 / VP80 / 692 / MNDSNSLLITRLAAQILSRNIQTVDVIVDDKTLSLEEKIDTLTSMVLAVNGLPQSPPRVSSSDLAASSIKNNSKLVGNDFEMRYNVLRMAVVFVKRYPKYYNETTAGLVAEIENNLLQYQNYVNQGNYQNIQGYDSLLNKAEECYVKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDADAGEFQIFLNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEALRNNIELVQPESDAVRRIVIKMTQEIKDSTTPLYNIAMYKSDYDAIKNKNIKTLFDLYNDRLPINFLDTSATSPAVRKTPGKRSAEDDLLPTRSNKRANRPEISVISSEDEQEDDDVEDVDYEKESKRRKLEDEDFLKLKALEFSKDIVNEKLQKIIVVTDGMKRLYEYCNCKNSLETLPSAANYGSLLKRLNLYNLDHIEMNVNFYELLFPLTLYNDNDNSDKTLSHQLVNYIFLASNYFQNCAKNFNYMRETFNVFGPFKQIDFMVMFVIKFNFLCDMRNFAKLIDELVPNKQPNMRIHSVLVMRDKIIKLAFSNLQFQTFSKKDKTRNTKHLQRLIMLMNANYNVI / 201ADANISTAFSDPLPGSSAPR220, 221YMYESSESDTYMEPAR236, 248DYNAAYTADEYNSLVR263, 332CVADTLEVMLEALR345, 346NNIELVQPESDAVR359, 371DSTTPLYNIAMYK383, 405LPINFLDTSATSPAVR420
4 / 340 / MSLAAKLIIYNYYAKYNEVHDVYGESYHHHRIVQEYLSESYVNDMSCIERDVTAMRRLKIGSCTFDEAVKMIDAGDSIKSLSHWFSTGETTGIDDNVRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMRNGKLLHIANVFNPNSDAVGWWYNKFCVITYVHRIMHRSVPAELVPRLSEAVKKFIRLSKSDYDDRLHVDESYNCPRVIAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCYTVIKDFGRQCIDVYRDLKDVFDLLHAHSMSDKDKNSLMDLLCVMDCEEIDVDCFYYIFESFLNNKHLQ / 7LIIYNYYAK15, 16YNEVHDVYGESYHHHR31, 80SLSHWFSTGETTGIDDNVR98, 100VLEQIDAVVPVSVR113, 119QIFSLNNFER128, 154LLHIANVFNPNSDAVGWWYNK174, 175FCVITYVHR183, 268SFSCYTVIK276, 288DLKDVFDLLHAHSMSDK304
77 / ODV-E25 / 228 / MWKIVLLIVLLVLIYLYWTNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPNTGPLSEREVRELRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREMN / 70LSQMYIAEKPLSIDDIVK87, 158FEVDSMIVCLIDPNTGPLSER178, 195NEAAQQVLLENNFTAINADQTAYLK219
120 / ODV-EC27 / 290 / MKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVTETNDTSIPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAKTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAYLHYYIFKNYGVFEYCKSLTDHSLFTNKLRSTMSTKTSNLLLSKFKFTIEDFDKINSNSVTSGFNIYNFNK / 25TYELAEFDLK34, 35NLSSLESYETLK46, 79QIAAVVFSTLAFIHNR94, 148EFDTEALVNFENDNCNVR165, 228NYGVFEYCK236, 266FTIEDFDK273, 274INSNSVTSGFNIYNFNK290
10 / 356 / MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAAVTCHIDDDDYKSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNGAYRLNGQIDLHLNRHIKCIKTQYNDEFDLVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLLGNEYHVLVSSLQRVLNDQLMCLLKDIFTNKFDYKIKRRLNHLKRLFANLPAESYNSCVNDLTDMYLYKEQNETITNFVKKILDISGPDLGCRKLMRIYLNTDTFRGQLPAYLTHYVNYPHKNLCDQNWKRFMSCIFSLY / 4LLNQLNLGVLPYITTK19, 100CVDQHYAELDVLTR113, 151TQYNDEFDLVR161, 184ITTAPLSFNVFFVNVR199, 213NFSLLGNEYHVLVSSLQR230, 298ILDISGPDLGCR309
112 / P35 / 299 / MCVIFPVEIDVSQTVIRDCHVDEQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIETYEKYCLPQLVDKHNDCYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVLAYVDSVEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKFNWKIFCNGFIYDKKSKALYVKLHNVTSTLNKNVILDMIK / 34IMNTQLTKPVLMMFNISGPIR54, 86IDGFHDNIQYFK97, 136YCLPQLVDK144, 209QFEEFVQK216, 217LILPSSFNDSEK228, 264IFCNGFIYDK273
72 / VP39 / 350 / MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETGLVASVPDGPELYNPIRSSDIMKSQPNRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLRNDFISRANPNATLGGGVGALAGPAPGVVLGEAGGGVAA / 34SPCSPDAYHDDGWFICNSHLIK55, 62MVLPIFDEDDNQFK75, 190GGVGDQLFNNYSGFLQNLIR209, 211AVAPEYLQIDTEELR225
116 / ME53 / 451 / MNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLERSISSSIVSKKPVVNRKDGYFVPPEFGNKLESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLKFSTNYIMGYINSKDMRMTGKFASSSVKYKKTTEQHMSDSRCTTCNYRFKDNTRAWFLYVVVHIEKPLDDSDRIDICCQKCYLYHNVPKTSYEIYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVKELKIDDHNCKVFEIIRRIIRNHKEPNERIQTIDLSTTGGLVLRETYTNIVLQRYRSMCTRPDAADDVNCFILQEPSEMMAALQDNRFSGIKGTVFATVKVKKFTEVLDGGAITFPSRPTINNYCKLCKKTKLYYKNPVLYCTKCGFTNVYHFPEYSKLVYYSKAIKNFEMHNEMIIYYDLKMYKKLINIVNNNV / 114MHFMSDLER122, 131FSTNYIMGYINSK143, 219TSYEIYPSINLVDLSYLAR237, 286IQTIDLSTTGGLVLR300, 301ETYTNIVLQR310, 360FTEVLDGGAITFPSRPTINNYCK382
85 / 362 / MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQNTILNNNAAIASQYAAGNAGVVVAAPASAHPTPRPVINLFARANAVAPAQPSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHSLFKLLETTFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYAKIVLLQNVASQRDKRTTLEELLIERGEKIQMLQPQQYINSGTEIPFCDDSEFLNRLLKHIDPYPLSRMYYNAANTMFYTTMENYAVSNCKFNIEDYNNIFKVMENIRKHSNKNLNDQDELNIYLGVQSSNAKRKKY / 102ANAVAPAQPSEELINMR118, 127LIHHYSLNSTSSTEYK142, 165LLETTFDDYTCRPQMTQVQTDTLLDAVR190, 242TTLEELLIER251, 328VMENIRK334
55 / LEF-3 / 385 / MATKRFFSGESSGEPLIKRMAMANSPKKIRENYKRINGKLMGKMTLSIDNEYYYTFRIMSDNKIQEYYGDSQSFKDMEEGKCYDISLNYVKTKFSQMIQINEYKECEMEIETAIPLSAYLTNKHFENEDSVNIIVKYKFIYKKINSNLYKIVFEVAYKNFNDDSDVVQVECFVNAKTLMNLFKNNIKGSDDINEVFKYLKDNENQIFTIYNIKCQQIFNGANVYMNWNVVNSTRIELCEAKENEAYSNLQNCTNARINISRSNKRVASYNVNMLKSELEENDMSDNKFIVQFKSDDLNVADSDDRSTSSDSSKWNKSVFYVNTNKKTEADSLQKLCADFNQISMLLEDNLIKVTIYVTVENGENGNMNVLGLLKYDEDENDYTFL / 64IQEYYGDSQSFK75, 64IQEYYGDSQSFKDMEEGK81, 94FSQMIQINEYK104, 159NFNDDSDVVQVECFVNAK176, 201DNENQIFTIYNIK213, 335LCADFNQISMLLEDNLIK352
82 / 38K / 320 / MASSLQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIFKAPADNMCDIRHNIKRAFKTPVLGHMCVLSNKPPMYSFLKEWFLLPHYKVVSLKSESLTWGFPHVVVFDLDSTLITEEEQIQIRDSFVYDSLQELHEMGCVLVLWSYGSRDHVAHSMRDADLEGYFDIIISEGSTVREERSDLVQNSHNAIVDYNLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLSDKNVNFFKSITLVDDLPTNNYAYDFYVKVKRCPTPVRDWHNYHEQIIDNLIEYDNMYNF / 22HVLVLSEYADLK33, 112EWFLLPHYK120, 212SDLVQNSHNAIVDYNLK228
40 / 319 / MSKRVREMSVVSDETAKRIRQNEHYHAKNESFLGFCNLEEIDYYQCLKMQYVLDQNFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIKNARLVLSNSVKKQYYDDVLNLKKNTDLESYDPLITVFLQIGESINEEIQKLRKALVNFFTNKPDKSDINNPDVVSYQFIFDRVQKLYNREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAENIVKPCFEQFGTILHIYVCPLNHNRIIVEYANSESVQKAMTVNDDDARFTVTEFSVVQYYNVAKTEMVNQRIDIISKNIEDLKNSLKSYT / 112QYYDDVLNLK121, 165SDINNPDVVSYQFIFDR181, 278FTVTEFSVVQYYNVAK293
124 / ODV-E56 / 375 / MSFFTNLRRVNKLYPNQASFLADNTRLLTSTPAGFTNVLNAPSVRNLGNNRYQPGYQLSNNRFVSTSDINRITRNNDVPNIRNVFQGISDPQINSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHNHMRTLKVAGVGILLAGGGYLLFTASTLVQDIINAINRTGGSYYVQGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDLPAGQTIMCIEPYSFSDLVGDLGLDWLLGREGLVGKSSNSSDGIRNKIMPIIMMIGAVLFLGLILYFIYRYMTKGGGGGGGSGGAPTPIVIMQHPASTTAPRR / 27LLTSTPAGFTNVLNAPSVR45, 83NVFQGISDPQINSLR97, 131TPEGVQNALQQNPR144, 195NAGENVESCLLLQR208, 347GGGGGGGSGGAPTPIVIMQHPASTTAPR374
43 / VP1054 / 365 / MCSTKKPIKLDLCASVKLTPFKPMRPPKPMQCWIHPRRANCKVTRPRNNYSDPDNENDMLHMTVLNSVFLNEHAKLYYRHLLRNDQAEARKTILNADDVYECVLIKPIRTEHFRSVDEAGEHNMGVLKIIIDTVIKYIGKLADDEYILIADRMYVDLIYSEFRAIILPQSAYIIKGDYAESDSESGQSVDVCNELKYPWNLITANSFIVSTDESRQSQYIYRTFLLYNTVLTAILKQNNPFNVIAENTSISIIVRNLGNCPNNKDRVKCCDLNYGGIPPGHVMCPPREITKKVFHYAKWVRNPNKYKRYSELIARQSEAGGASASLRENVNNQLHARDASQLHLLDWENFMGEFSSYFGLHAHNV / 141LADDEYILIADR152, 223TFLLYNTVLTAILK236
129 / 77 / MDSSNCIKIDVKYHMPLHYQCDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDATTYNSCIIKI / 13YHMPLHYQCDINADK27, 28NVVNAYDAIDVDPNK42, 44FIINHNHEQVDETNKQEVVDK64
48 / 83 / MLPKYYQNLPYNGKRIFEKFYDRSLQKYKSTHIATKLACCAVRKKYILIDCKWQPRPDANNSDTTTTNTEDSTTDTETEDEIA / 5YYQNLPYNGK14
34 / 78 / MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRCSSKLKITNGISIPIYPNRRAQQHARRSR / 5YATCYVCDELVYLFK19
23 / SOD / 151 / MKAICIISGDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK / 15IYFQQESANRPLK27, 28ISGYLLNLPR37
3 / PK1 / 275 / MATTTATNATLQTLVQFYENCKNVKTRYKIINGRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHENLPSVHDGTLEYFSPEKIRRHNYARSFDWYAVGVLTYKLLTGGRHPFEKSEDEMLDLNSMKRRQQYNDIGVLKHVRNVNARDFVYCLTRYNLDCRLTNYKQIIKHEFLS / 143LENVLYFEALDR154
70 / VP15 / 126 / MNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKTKEIKEYYYIKVECYVNN / 57TYNLTLQQYNEALNQCALNDSR78
2 / ORF1629 / 542 / MTNRKYESVQSYLFNNRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDDSEVSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYIERLLNIGTVNDSEITMLIADFYDLYSNYNIELPPPPPQALPRSRRPSVVQPAAPAPVPTIVHEQTKPEQIIIPAAPPPPSSVPNIPAPPPPPPPPPSSMSELPPAPPMPTKPQPAAPLDDRQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSASPPPPPPPPAPPAPPPMIDLSSAPLQPPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSEATSNDEGWDDGGNNRPNAPDVKYVQALFNVFTSSQLYTNDSDEKNTKAHNILNDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFYKSIEDLIFKFRYKDAENHLIFALTYHPKDYKFNELLKYVQQLSVNQQRTESNA / 377SSSEATSNDEGWDDGGNNRPNAPDVK402, 450ARLLLQDLASR460, 486NLFYKSIEDLIFK498
110 / ALK-EXO / 420 / MFASLTSEQKLLLKKYKFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEILRVEKATRGQSKNELWTLLRLDRSTASASSNSSGNMLQRPALLFGNAQESHVKETNGIMLDHMREIIKNKITSAVVETVLDCGMFFSSLGLHAASPDAYFSLADGTWIPVEIKCPYNYRDTTVEQMRVELGNGNRKYRVKHTALLVNKKGTPQFEMVKTDAHYKQIQRQMYVMNAPMGFYVVKFKQNLVAVSVPRDETFCNKELFTENNAYVAFAVENSNCERYQCADKRRLSFKMHSCNHNYSGQEIDAMVDRGIYLDYGHLKCAYCNDFSSNSREACDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLKTFCCGVQNSSPTKHDHLNNCVYYLEIK / 30AQLSRWR36
60 / 268 / MKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDAPATSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQVYTLGRQLYEVLRSIFVDEPFKLWLERNTHEFDNNTDKILETLQSELKLALADKDKLKTCTFKDIITNFLNTKLDCRYDCADEYIKPNCIVDTYNCCNLVFKKET / 177SIFVDEPFK185
22a / 54 / MMQMAFMLFLNYTILILSKQSPYSQQRLEKRRRDLTKFDELKGSLSGTLLNQVY / 20QSPYSQQRLEK30
111 / 70 / MLQSVRVGQFVDNKFVFAFKRSVCNPLHSVQNGHIFIYTSGAVTFCNMSDCVCYLWQRDNGPENYTRVVT / 1MLQSVRVGQFVDNK14
91 / 105 / MKPTAADIISRVTGGRTGNNIVDIIQANNSPTEGDQLGQFVNRNRSLIKEFVLVVCGFLIFVMIVLFFMLLVVILLNQETVTVQKQKYETTLLENYDIRNRNATT / 17TGNNIVDIIQANNSPTEGDQLGQFVNRNR45
117 / EXON0 / 261 / MIRTSSHVLNVQENIMTSNCASSPYSCEATSACAEAQQVMIDNFVFFHMYTADIQIDAKVQCGVRSAAFAIIDDKHLEMYKYRIENKFFYYYDQCADIAKPDRLPDDDGACCHHFIFDAQRIIQCIKEIEGAYGVRDRGNVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK / 139GNVIVFYPYLK149
71 / CG30 / 267 / MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCIRKIRKRKKIPCPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYKCITNATTITTNVTINVD / 95INDNFDAASLASVLFEK111
30 / P43 / 362 / MDKRANSRKPFLFYNEDYYCEKPKRYFHTNKVIFEKLDPYATNINRCRKLLTDFFDYCLPKYYRRKNKFALLFRLLEPVIKQTGTSSALTAVSDQSRWLEINQFSAWERRDNQYAHKWLIKVAGADMGQQILFIIKQVTKKFKTCNLGFHNYYKLFRRCLSMLLFKHKEVFIKCLQVILKAAMPVKNKGVVKSNYAFAVTNALHYYIVDNPHLLCKDINVAIKVRRLLIKHEMLPTEKRIRLSFEKCSKGIEVPLYEKLLLNHMMRINDDNLQWPSLMNNKKIMEWNANRGFDESNKILHVYIGQYYKSSCRRIKKSFFKYNGWNEQLRFCRTEKFCSLVNLQLNKDGSKKLKRVQRKCDKL / 122VAGADMGQQILFIIK136
110a / 57 / MSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNKVVDEHVSTSQYLS / 21FIINKLTNADALQHLK36
36 / 193 / MLPYEMVISVLVYLSPAQILNLNLPLAYQKSVLFASNSAKVNERIRRLARDNNDDDDSYFYHKQFIKINFLTKKIINVYNKTEMCIRATFDGRYVVTHDILMCFVNKSYVKQLLRGVDTCITLQQLVKMYSPEFGLCVNSKNMFVLTESVLTSISLKHSFGKCEWLDKNIKTVCLQLRKLCINNKQHTTCLPY / 31SVLFASNSAK40
29 / 217 / MRNAAGLFMIIEPDKAVLLCARRAYRSANAPAADINDTFLEKISIPRGHRDCCDAKVYETAVREFVEETGRFFDSAFIYKFPFTLQWKDDGVTYKYLIYVGVVRGNLIDVNAKPNTYTVKLLPGTFGNDYRIMLKPRRFNCEITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHALRRV / 202IDNNDAPQK210

SupplementaryTable S6. Host proteins identified in the M3 section of the gel.

Protein / Annotation / Size(amino acids) / Sequence / Sequence(s) of corresponding peptide(s)
BGIBMGA002381-PA / HSC/HSP70 / 649 / MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGGVPGGMPGFPGGAPGAGGAAPGAGGAGPTIEEVD / 37TTPSYVAFTDTER49, 138TVQNAVITVPAYFNDSQR155,
160DAGTISGLNVLR171, 172IINEPTAAAIAYGLDK187, 302FEELNADLFR311, 329AQIHDIVLVGGSTR342, 362SINPDEAVAYGAAVQAAILHGDK384, 459FELTGIPPAPR469
BGIBMGA011746-PA / DEAD/DEAH box helicase / 569 / MRIDNNGNVFVTSGVLSASAKQCIDFFLCTRSGNWNNSRGNGGSKFGGGNKFGDNSSRFGNGGNRFGGSGGFGGKKEFSGGQNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADRCGGGGGGWNRNRFGGGGRGGGGSFKRGSNFGKSSQRGGSGYKRFDDY / 112SPYEVEEYR120, 159EPTPIQAQGWPIAMSGK175, 188TLAYILPAIVHINNQPPIR206, 208GDGPIALVLAPTR220, 221ELAQQIQQVAADFGHTSYVR240, 260GVEIVIATPGR270, 285CTYLVLDEADR295, 317QTLMWSATWPK327, 437ASILVATDVAAR448, 457YVINFDYPNSSEDYIHR473, 484GTSYAFFTPSNSR496
BGIBMGA010673-PA / DEAD/DEAH box helicase / 372 / MGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFPLSVKQFMEKHLKEPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKPIPKVIDPALYVARPEDEDLGDK / 39TGAYCIPVLEQVDPK53, 54KDTIQALIVVPTR66, 103IYQNVQVIIATPGR116, 163QILLFSATFPLSVK176, 199GVTQYYAFVQER210, 245ITELGYCCYYIHAR258, 278NLVCSDLFTR287, 340IEQELGTEIKPIPK353, 354VIDPALYVARPEDEDLGDK372
BGIBMGA006405-PA / RNA recognition motif / 361 / MRPQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVCLNGPHKINGKPLDVKKALPKDGSDQRGGGGGGGRQGGGSGRNDSWGSSGGYGNNQGGWGGNSNPWESNQGGWGNQGGGGGYGGGGNGRGGWGNQDFGNYNQQSYSGGPTRNQAYGNNRSTPYNMNQGAGGGGGGGYGGDSFDNGITGAISSSSEKLAIAGKLPLKPSCYSEISHPTGTLTGSSRTDYPREHKWLI / 1MRPQNGDDGYEEPEVHR17, 40WGEIVDVVVMK50, 40WGEIVDVVVMKDPK53, 126QYFSNYGNVQNVSIVTDK143, 150GFGFVEFDDYDPVDK164
BGIBMGA014155-PA / K Homology (KH) domain / 377 / MADKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDKPTKVTVKVLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVKKYLVPDTNETVWMSQMRDIDVRDVHPARQPLLANPAKSILYRNTGAERTHPYREPAPVMHPPAAMPPRSMPPKNKIISILERARTAMEGSYSYEDHYAPPEPPMRGGGRAAEPDVYYERGHERFYEDEAHYREEPREYKASSRDVGTRRPAPHPPAHRHYPRAAPYSRLRRLKEDKTKYDKKRA / 18NTTQGKPEELDQNGEEGIK36, 161YSHLADDLHVEISAIAPPAEAHAR184, 195YLVPDTNETVWMSQMR210, 247EPAPVMHPPAAMPPR261, 278TAMEGSYSYEDHYAPPEPPMR298, 317FYEDEAHYREEPR329
BGIBMGA011965-PA / DEAD/DEAH box helicase / 628 / MTIDVVAVVEEVGVAEGEDPAAVVGVATGRKSADLVDLAEVVVGTVDAAVGMAAVEDETAAGVLGEWGIGMIAPISKMISLAKNFYVPHPNVQRRTQSEIEAYRSQHQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLIDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELSANHNILQIVDVCEEWEKNDKLITLLTEISSEEETKTIIFAETKRRVDDICKAINRAGWRALAIHGDKNQQDRDYVLNQFRHHAAAILVATDVAARGLDVEDVKFVINYDYPNNSEDYVHRIGRTGRSQNTGTAYTLFTPNNSAKARDLMSVLQEANQVVNPKLLELAQCGMGFKGKFGRSRYRDDGGRGRDGGSRGGRGSRGGGRGGYGDRGPKDCAGRYDAVRSCSGKLVTLIQLRLKIMFRGGMQVVRRGLVNTLHQMSRELISQSKKFLGACAGHNIDDGPASSFNCGAT / 115DVPAPSIFFEEGGFPDYAMK134, 139QGFPNPTPIQAQGWPIALSGR159, 172TLAYILPAIVHIINQPR188, 192DDGPIVLVLAPTR204, 205ELAQQIQQVANEFGQSIHVR224, 244GVEIVIATPGR254, 269CTYLVLDEADR279, 439FVINYDYPNNSEDYVHR455
BGIBMGA011581-PA / SUMO / 91 / MADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGGVSLV / 16VLGQDNAIVQFK27
BGIBMGA004881-PA / RNA recognition motif / 252 / MVPQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGGVISVERGRIKERGQRGGGRGGRGSMRGGMERRGGGPVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALMDRGPRDAYAPPAPAYPDERYQNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYVPQYMQPPLGR / 7VFVGSLPQGSKPEDLR22, 28FGVVTECDIMNR39, 57ALHNSTFNGGVISVER72, 156DAYAPPAPAYPDER169
BGIBMGA013464-PA / RNA recognition motif / 287 / MANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPDGPGGIGTRGGRGGRGARGGRGGRGGYGGQPWGNQGYGGYGYGQGGYGGGYDSYGYGGYGYDGYGGYGGYDYSGYPNYGKRGKQY / 45LFVGGLSWETTDK57, 61DHFGAYGEIESINVK75, 125IFVGGLSSEISDDEIR140
BGIBMGA004822-PA / DEAD/DEAH box helicase / 405 / MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI / 46GIYTYGFEKPSAIQQR61, 100ETQVLILSPTR110, 201YLPPATQVVLISATLPHEILEMTSK225, 324VLITTDVWAR333
BGIBMGA007410-PA / RNA recognition motif / 314 / MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGRDPYPPPPPPPFLRDRMMGGFGDPYDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSPPLRREPMPPMPNLPPLRSGMGSMRSSYDPMYSRRSPPPGPQMSRG / 41NYGFVHMENEQVGR54, 55EAIQNLNGELVHGQAIK71, 120NYGFVHLDATGDVNDAIK137
BGIBMGA001549-PA / Ubiquitin / 153 / MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM / 12TITLEVEPSDTIENVK27, 64ESTLHLVLR72, 88TITLEVEASDTIENVK103
BGIBMGA006196-PA / Chaperone DnaJ(Type I HSP40) / 313 / MGGSRGCGQGRGPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLISCKDCRGQGIKVSYQQIAPHMTRQFHSRCPSCLGQGETFNEKDKCSKCKGKKVLNETKILEVHIEKGMRDNQKIYFRGEGDQQPDTEPGDVIIVLQQKPHEKFKRNGDNLIMKHEITLTEALCGFEFVAKHLDGRDLLIRHLPGEVIKPGDVKCVQGEGMPIYKNLFEKGNFYVKFDVVFPENHFANEEQLKQIETILPPRPAFVMPTGEDVEEVNLMDYFTPSESSRGREEAYASDDEEHMHAGPGVQCAHQ / 72VSYQQIAPHMTR83, 89CPSCLGQGETFNEK102, 236FDVVFPENHFANEEQLK252

SupplementaryTable S7. Viral proteins identified in the M4 section of the gel.

SupplementaryTable S8. Viral proteins identified in the M5 section of the gel.

ORF / Protein / Size(amino acids) / Sequence / Sequence(s) of corresponding peptide(s)
1 / polyhedrin / 245 / MPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYIGTDSAEEEEILIEVSLVFKIKEFAPDAPLFTGPAY / 1MPNYSYTPTIGR12, 13TYVYDNKYYK22,
20YYKNLGCLIK29, 36HLVEHEQEEK45,
36HLVEHEQEEKQWDLLDNYMVAEDPFLGPGK65, 46QWDLLDNYMVAEDPFLGPGK65, 46QWDLLDNYMVAEDPFLGPGKNQK68, 69LTLFKEIR76, 77SVKPDTMKLIVNWSGK92, 85LIVNWSGK92, 85LIVNWSGKEFLR96, 93EFLRETWTR101,
102FVEDSFPIVNDQEVMDVYLVANLKPTRPNR131, 135FLAQHALR142, 135FLAQHALRWEEDYVPHEVIR154
143WEEDYVPHEVIR154, 155IVEPSYVGMNNEYRISLAK173, 155IVEPSYVGMNNEYR168, 174KGGGCPIMNIHSEYTNSFESFVNR197,175GGGCPIMNIHSEYTNSFESFVNR197, 198VIWENFYKPIVYIGTDSAEEEEILIEVSLVFK229, 230IKEFAPDAPLFTGPAY245, 232EFAPDAPLFTGPAY245
106 / P24 / 195 / MKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLIKNNKNYIHVFGLFKYLSNYNLNNKKRPKEYYVLKSIISDLLMGAQGKVFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNKKITFTTDTILENLKNIKDLMCLNK / 46IMSPFISNGGSTVWTNAAPSHK67, 71NNKNYIHVFGLFK83, 74NYIHVFGLFK83, 84YLSNYNLNNK93, 98EYYVLK103, 98EYYVLKSIISDLLMGAQGK116, 104SIISDLLMGAQGK116, 117VFDPLCEVK125, 126TQLCAIQESLNEAISTLNVHAAANSPAPDINK157, 158LQDMIQDLQSEYNK171, 158LQDMIQDLQSEYNKK172,172KITFTTDTILENLK185, 173ITFTTDTILENLK185, 173ITFTTDTILENLKNIK188, 186NIKDLMCLNK195
134 / 109 / MYSTSKINNARVVASQHDYDRDQIKRELNSLRRNVHDMCTRSGTSFDCNKFLRSDDMTPVVTTITPKRTADYKITEYVSDVKTIKPSNRPLVESGPLVQEAAKYGRCTV / 12VVASQHDYDRDQIK25, 42SGTSFDCNKFLR53, 51FLRSDDMTPVVTTITPK67, 54SDDMTPVVTTITPK67, 54SDDMTPVVTTITPKR68, 69TADYKITEYVSDVK82, 74ITEYVSDVK82, 74ITEYVSDVKTIKPSNRPLVESGPLVQEAAK103, 83TIKPSNRPLVESGPLVQEAAK103, 83TIKPSNRPLVESGPLVQEAAKYGR106
77 / ODV-E25 / 228 / MWKIVLLIVLLVLIYLYWTNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPNTGPLSEREVRELRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREMN / 63IAHGDNKLSQMYIAEKPLSIDDIVK87
70LSQMYIAEKPLSIDDIVK87
93VGTNSIFLGTVYDYGVK109
110SPNAASTSSNVTMTR124, 125GTANFDIKEFK135, 136SMFIVFKGITPTK148
158FEVDSMIVCLIDPNTGPLSER178, 158FEVDSMIVCLIDPNTGPLSEREVR181, 186SNCTLVYTKNEAAQQVLLENNFTAINADQTAYLK219, 195NEAAQQVLLENNFTAINADQTAYLK219
108 / PP34 / 315 / MKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTIPSKHRKMINDAGGSCHNTVKYMVDIYGASVLILRTPCSFADQLLSTFIANNYLCYFYRRRRSRSRSRSRSPHGRPRSRSRSRSRSRSRSSSPRQGRRQIFDALEKIRHQNDMLMNNVNQINLNQTNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASSITNINGTLNNLLTAIENLAGGGGGGGGGGGGNFNEADRQKLDLVHTLVNDIKNILTGTLTTK / 28MPLQAFQQLLFTIPSK43, 148HQNDMLMNNVNQINLNQTNQFLELSNVMTGVR179, 180NQNVQLLAALETAK193, 180NQNVQLLAALETAKDVILTR199, 292QKLDLVHTLVNDIK305
17 / 129 / MDGSVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISELQKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVINAETKTKLGHINVSLNQNDPNVLILTVTLTS / 37LQNYTVLK44, 37LQNYTVLKR45, 45RLSNGFIDK53, 46LSNGFIDK53, 46LSNGFIDKSVDVGSISELQK65, 54SVDVGSISELQK65, 54SVDVGSISELQKFNFK69
75 / 259 / MIPLTPLFSRYKDSYLLYSFRLIDLLRASKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIELIEIALDKEKYGTDITFVDSYQQETAGADAAAVSNNMLMKNLMAYVIMTFHNHVNDYKWIQRNQKPPAHYERMTWGEYKKLLNLQ / 1MIPLTPLFSR10, 11YKDSYLLYSFR21, 13DSYLLYSFR21, 22LIDLLR27, 37LLSSQATYLYHFACLMK53,60YEVQQLIEWAINASPDMDLQQFR82, 101SFTYTFTTIWDTMHFLSLIIDDMVYTR127, 128DKSSLDFVMQQLK140, 130SSLDFVMQQLK140, 144VLFYNVFFILQCAMCR159, 167GFLIYHIELIEIALDK182, 167GFLIYHIELIEIALDKEK184, 215NLMAYVIMTFHNHVNDYK232, 215NLMAYVIMTFHNHVNDYKWIQR236
34 / 78 / MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRCSSKLKITNGISIPIYPNRRAQQHARRSR / 5YATCYVCDELVYLFK19, 5YATCYVCDELVYLFKK20, 21TFSNMSPSAAAFYQQR36, 54LKITNGISIPIYPNR68, 56ITNGISIPIYPNR68, 56ITNGISIPIYPNRR69
61 / 133 / MSNLMKNFFTELVKSTTFTTKVSVVKTTLSDWLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFLVTKLDEAYQLPAY / 27TTLSDWLCEQVYPDK41, 27TTLSDWLCEQVYPDKDFSLK46, 50VINMFLNDEIENDK63, 50VINMFLNDEIENDKIYK66, 124LDEAYQLPAY133
100 / PK2 / 225 / MKPEQLVYLNPRHHRIYFASPLNEYMLSDYLKQRNLQIFAKTNIKVPADFGFYISKFVDLVSAVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKNNPQNITLYAAPEQIKKVYTPENDMYSLGIVLFELIMPFKTALERETTLTNFRNNVQQMPASLSQSHPKLTEIVCKLIQHDYSQRPNAKWLLKEMEQLLLEYTTGSKKTIKEGFGDKAI / 16IYFASPLNEYMLSDYLK32, 42TNIKVPADFGFYISK56, 46VPADFGFYISK56, 107NNPQNITLYAAPEQIK122, 107NNPQNITLYAAPEQIKK123, 160NNVQQMPASLSQSHPK175
15 / PKIP / 169 / MSCILTAFCKKNQANLNSLITLQNKKVKNYYVKNNETAIDKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQPAVYDAFIKHSELFINAICQMDEKQQVNNFCLDELVKLKLIAIKHLCALEYLIENSI / 12NQANLNSLITLQNK25, 12NQANLNSLITLQNKK26, 51GQVEQLELVNQYLDAPK67, 111AQPAVYDAFIK121, 122HSELFINAICQMDEK136, 137QQVNNFCLDELVK149, 157HLCALEYLIENSI169
119 / ODV-E18 / 101 / MIYTDPTTGATTSTDVQSANYLNRLTPNMFLTILAVVVIIALIIMFVQSNSNNGNSSGAGSGGNGGGGGAATPPSATGFMNPLNATMRANPFMNTPQRQML / 1MIYTDPTTGATTSTDVQSANYLNR24
23 / SOD / 151 / MKAICIISGDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK / 15IYFQQESANRPLK27, 28ISGYLLNLPR37, 86SVGYNSLTEINMMDNVMSLYGPHNIIGR113, 114SLVVHTDKDDLGLTEHPLSK133, 142LGCGIIAICK151
48 / 83 / MLPKYYQNLPYNGKRIFEKFYDRSLQKYKSTHIATKLACCAVRKKYILIDCKWQPRPDANNSDTTTTNTEDSTTDTETEDEIA / 5YYQNLPYNGK14, 5YYQNLPYNGKR15
26 / Ubiquitin / 77 / MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY / 12TITAETEPAETVADLK27, 55TMADYNIQKESTLHMVLR72
76 / 161 / MATSKTIVLYLCQAPATASLYVSADTDADEPIIYFENITECLTDDQCDKFTYFAELKQEQALFMKKVYKHLVLKNEGVFNKHHVLFDAMIMYKTYVNLVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNLIGIEIVN / 50FTYFAELK57, 82HHVLFDAMIMYK93, 129IVVAVPVNWENDNLSVLLK147, 148HLHNLNLIGIEIVN161
94 / 424 / MRKYALLQKMIINELLFLNDNVNYATNKLFSKDQANGELQKLSAMLLNYKKSNKNVPNIKFDLKNLSFMLENTDKIDIIQFDDVKNYVQPAIVNLFESHNRSLNNYSTELNTLLENGNENLVPNITDIDNIKLSHMQLARLLCYTAVVESRNSKPWKAIFNNDTCVLTDSFFNYIMNILNMIKTNQGSLAHNLSVVYHIENIQMNLQNKLKPRSITIEIVDKDKFENKHSDIEVCYVMNNRLHPQDVNSQQTLMCSSFVELNALPFCLYNETLPDDQSMSVFNLYKFEQTKNNSVSKPSRLGNVMFVNSLIDKPITRETIVDIINSYHNACQNLKRSGHRVVGDYRAYERDYKLAALDFIILMLVTSITHRTLKYNMLNIHEKMFQELKTIVCKHSAAKLYDILINYDINKEPLNNFRYNYEVL / 301LGNVMFVNSLIDKPITR317, 318ETIVDIINSYHNACQNLK335, 400LYDILINYDINKEPLNNFR418
37 / ODV-E66 / 702 / MSTVLIIVVVVIFLICFWCLLNSSNNSNNKNDANRNNVFVDFDPLPFDAFDINTFDITNDDSIVAFQQNNIQELENFEQWFKNNLSYSFSQKAEKVVNPNRNWNDNTVFDNLSPWTSVPDFGTVCHTLIGYCVRYNNTSDALYQNPELAYNLINGLRIICSKLPDPPPHQQAPWGPVADWYHFTITMPEVFMNITIVLNETQHYDEAAALTRYWLGLYLPTAVNSMGWHRTAGNSMRMGVPYTYSQMLRGYLLAEIRQEQGIQEILNTIAFPYVTRGNGLHVDSIYIDHIDVRAYGYLINSYFTFAYYTYYFGDEVINTVGLTRAIENVGSPEGVVVPGVMSRNGTLYSNVIGNFITYPLAVHSADYSKVLTKLSKTYYGSVVGVTDRLAYYESDPTNNVQAPLWTMARRIWNRRGRIINYNANTVPFESGVILQSLNGIMRIPSGTTSTQSFRPAIGQTAIAKTDTAGAILVYAKFAEMNNLQFKSCTLFYDHGMFQLYYNIGVEPNSLNNTNGRVIVLSRDTSVNTNDLSFEAQRINNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQIISFQSMYTATASACYKLNVEGHSDSLRAFRVDSDENIYVNVGNGVKALFNYPWVMVKENNMVSFMSANEDTTIQFSVIMNSFTSIGEPALKYSPSNCFAYGNGFKLNDSTFDLQFIFEIV / 135YNNTSDALYQNPELAYNLINGLR157, 258QEQGIQEILNTIAFPYVTR276, 344NGTLYSNVIGNFITYPLAVHSADYSK369, 557VPITNINVPSLTVR570,
629ALFNYPWVMVK639
59 / 99 / MNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLIESNAMVFDETNKNLKFIHNSISICLNRCINLITIKHYVQ / 14LQNDVLDMMR23, 24EVDQYLNSDTPDYTIESLNAPGK46, 47QFDFLDEMLTK57, 59LIESNAMVFDETNK72
47 / 171 / MYQIPDMLYNEKMPPRAKKLFVEAFTKYHKMNGGDEDIAMHKARKALEEKYVKINTLKNSWIPRKAAYEIVRDDIDESDDNADNSTKTKSNDRLNNENTSTDYDTEDEERVNTFNSRKRRVVAKRAFNSKSKKIPIGKVVSTPRKRLKQHTNTPPHYDTSEDEDEDNYYNY / 20LFVEAFTK27, 66AAYEIVRDDIDESDDNADNSTK87, 94LNNENTSTDYDTEDEERVNTFNSR117, 147LKQHTNTPPHYDTSEDEDEDNYYNY171
122 / 201 / MNVNLYCPNGEHDNNIFFIMPSKTNAVIIYLFKLDTEHPPTYNVNAKTRLVSGYENSRPININLRSITPSLNGTRGAYVISCIRAPRLYRDLFTYNKYTAPLGFVVTRTQAELQVWHILSVRKTFEAKSTRSVTGMLAHTDNGPDKFYAKDLMIMSGNVSVHFINNLQKCRAHHKDIDIFKHLCPELQIDNSVVQLESHSS / 24TNAVIIYLFK33
50LVSGYENSRPININLR65
98YTAPLGFVVTR108, 182HLCPELQIDNSVVQLESHSS201
118 / 476 / MSGGGNLLTLERDHFKYLFLTSYFDLKDNEHVPSEPMAFIRNYLNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRTTVDILEFDTRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGCVLAGSAGFLFDDAYVDWNGVRMCAAPRLDNNMHPFRLYLLGEDMAKHFVDNNILPPHPSNAKTRKINNSMFMLKNFYKGLPLFKLKYTVVNSTKIVTRKPNDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIMKIITKFVIEENPAMNGEMSREIILDRYSVDNYRKLYIKMEITNQFPVMYDHESSYIFVSKDILQLKGTMNAFYAPKQRILSILAINRLFGATETIDFHPNLLVYRQSSPPVRLTGDVYVVDKNEKVFLVKHVFSNTVPAYLLIRGDYESSSELKSLRDLNPWVQNTLLKLLIPDSV / 94TTVDILEFDTR104, 379ILSILAINR387
92 / 391 / MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMIIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKELVESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCATVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYYL / 58FNSVLVYR65, 204IFCIFQYR211, 263QAQSLLGIPDYSQTVVDFVK282, 287IIFPYQLVPNVIIK300
124 / ODV-E56 / 375 / MSFFTNLRRVNKLYPNQASFLADNTRLLTSTPAGFTNVLNAPSVRNLGNNRYQPGYQLSNNRFVSTSDINRITRNNDVPNIRNVFQGISDPQINSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHNHMRTLKVAGVGILLAGGGYLLFTASTLVQDIINAINRTGGSYYVQGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDLPAGQTIMCIEPYSFSDLVGDLGLDWLLGREGLVGKSSNSSDGIRNKIMPIIMMIGAVLFLGLILYFIYRYMTKGGGGGGGSGGAPTPIVIMQHPASTTAPRR / 10VNKLYPNQASFLADNTR26, 13LYPNQASFLADNTR26, 27LLTSTPAGFTNVLNAPSVR45
112 / P35 / 299 / MCVIFPVEIDVSQTVIRDCHVDEQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIETYEKYCLPQLVDKHNDCYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVLAYVDSVEFDGKQFEEFVQKLILPSSFNDSEKVLYYNEASKNKNMIYKALEFTTESSWVKSNKFNWKIFCNGFIYDKKSKALYVKLHNVTSTLNKNVILDMIK / 34IMNTQLTKPVLMMFNISGPIR54, 217LILPSSFNDSEK228
66 / GP41 / 403 / MTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTLDAGESIWYNKCVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESLPSDSNIFQASFVLNSLPAYAQKFYNGGADMLGKDALAEAAKQLSLAVQYMVAESVTCNIPIPLPFNQQLANNYMTLLLKHATLPPNIQSAVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARIMSLKENVAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQNETLRRFIFQQINYNKDANAIIAAAAPNVTRPNTKGRTV / 325QPSMFQNATFLTSAANAVNSPAAHLTK351, 371FIFQQINYNK380
63 / VLF-1 / 379 / MNGFNVRNENNFNSWKIKIQSTPRFESVFDLATDRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEKNLMLKNVIDTILNFINDKIKMLNGDYVHDRGLIRGAIVFCIMLGTGMRINEARQLSVNDLNVLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEESGVEMERPRSNMIRHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNKYNIGLDETSSEEENNNNDDDAQHNRNSSGSSGESLLYYRNE / 25FESVFDLATDR35, 52YMFPKPFAPTTLK64, 216QLSVNDLNVLIK227, 286LLEESGVEMERPR298
62 / 85 / MNLYLLLGALTIFSLVYDKKENSIFLYLLILFLVFIIVVSPAIISKNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID / 66KLEIEQALDAILNK79, 67LEIEQALDAILNK79
9 / 210 / MNLKVILTPINLKGEEEPNCVERITIMPCSLMDTEICLNVRCRSPFAKFKVLIIVDGFDSAYIQATFCSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVKDMVNSIENQQTMLKVFINEANVYNKWNMLKGLIYNNNNNESVLVNNVVKFIKVDKNYNVTKKNNVTKWVPAVNYFTGRQLLTILFIFKFK / 5VILTPINLKGEEEPNCVER23, 188WVPAVNYFTGR198
8 / BV/ODV-
E26 / 229 / MNSVHTRLCASSNQFAPFKKRQLAVPVGSVNSLTHTITSTTVASVIPKNYQEKRQKICHIISSLRNTHLNFNKIQSVHKKKLLHLQNLLRKKNEIIAELVRKLESAQKKTTTTHRNISSKPAAHWKYFGVVRCDNTIRTIIGNEKFVRRRLAELCTLYNAEYVFCQARADGDKDRQALASLLTAAFGPRVIVYENSRRFEFINPDEIASGKRLIIKHLQDESQSDINAY / 176QALASLLTAAFGPR189
129 / 77 / MDSSNCIKIDVKYHMPLHYQCDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDATTYNSCIIKI / 13YHMPLHYQCDINADK27, 28NVVNAYDAIDVDPNKK43, 44FIINHNHEQVDETNKQEVVDK64
49 / FP25K / 214 / MDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDSKKMLQNLI / 39LECDNLTDSVEIYGIHDNR57
78 / Helicase / 1222 / MIDNILQFFLKDVPEDKTYEINNLQDANHLIIRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTLDGHDWVLESNDFCIFVKPFILKKHYEVIQKYINFENFFKSTDPGYINKCVQAGDYYYWPNWPKGQAFSFNGWQLFLNIKFGIVIEPTIPIIHNKKLGPVDLFVFDPKYFLNVELSLRTNHDPPQTLFVNGKTKFDESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENADYIQTQINLGLIAIYENMVKVLATHEQANDPNLLQQYFEKSKFKNFDFLIYVLWKILTKNENFSYRETDIKLFLELLCESLFACDKEILNEALKRCEPYKKQEKVVFNRTCNHWFDFDDTKLCVSLGYYYGIHYMIYLTLSAKNETLDDDELWAYTYENVMALNLPPDIVCKGFFRKLENVVTGVNLVFNGKNYQIVKKEDDLFKLVKSNCYKLSNIKFNNWKYLYLTTYGVYNLFTNSFHSNCPFLLGTTLPQTLKKPTDEEYLPEDAFNYMLSTSTDELSIYRIYHIAKMCRDVKMLKTNMAIVNYMGNCNTCQADMRVALNNLFRDLWNLDDENLITLALYVNKNKVSDMLHNLKCKPCRSTVSGSRPKCKCYKKIKINRKALKVCLIADMFGNDAELSKLIWMLIFTNKTYVSTTLIRTNSEFVNQHGEFFFKEHNKIIQYLYQTIHKIEYVDMLMDKFNDKRLFLTELRDDVAREPDVQFEESDNICKFYTHHTDALIILKKYNVWWDKIILARSTDDLPTWLTRFYMRIIMSKMDLKEYSYNYLKKIVEGYLYFKRFTNFNHANAIMLMHFAASLAIPVDYGKKAIYMPGEPGSGKSSFFELLDYLVLMHKFDDDNHSGESNKETSDKEVSKLNSQLYVINELKQCSESYFKKHADSSKSDSKSRKYQGLLKYEANYKMLIVNNKPLYVDDYDDGVQDRFLIVYTNHKFVDSVKFAGSVYEHIKSKQFPIESMYYESLVTPVRLFLSHVLMYRRDPKTGFVVYKTLLNNDPMHKHNLMCMSTNNSPLYALIYILNIKTVRNATITIGEDKMEEMISIAVQHLKNFLHPSFVQYNYKKNINASSSKSFVFNEQVLLQQIKNKFKNNYNKTTNVFYNMTMALNRNDLNTSVPNFVC / 1174SFVFNEQVLLQQIK1187
2 / ORF1629 / 542 / MTNRKYESVQSYLFNNRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDDSEVSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYIERLLNIGTVNDSEITMLIADFYDLYSNYNIELPPPPPQALPRSRRPSVVQPAAPAPVPTIVHEQTKPEQIIIPAAPPPPSSVPNIPAPPPPPPPPPSSMSELPPAPPMPTKPQPAAPLDDRQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSASPPPPPPPPAPPAPPPMIDLSSAPLQPPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSEATSNDEGWDDGGNNRPNAPDVKYVQALFNVFTSSQLYTNDSDEKNTKAHNILNDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFYKSIEDLIFKFRYKDAENHLIFALTYHPKDYKFNELLKYVQQLSVNQQRTESNA / 357NLIADVLVDTINR369
121 / 95 / MLLLIIFLILIKVLIFKKMNQTHLKCHSDKICPKGYFGLNADPYDCTAYYICPHKVQMFCESNHEFDLDSASCKPIVYDRTGSGCAARMYRNLLL / 35GYFGLNADPYDCTAYYICPHK55
79 / 182 / MLSIILAIVFIFFVLIYLIISIKNHHPFLHRIKTLIKDFNNTLLFGAYIQIYDLSTPARTERLFIIAPENVVLYNFNKTLYYYLDSANVFCPNEFSVTTFTQSTIKTINETGIYATACTPVSSLTLIEHFVTLKNNVPDHTLVLDVVEKQIQFSILDIINYLIYNGYVDLDNQNVSSTDQVY / 63LFIIAPENVVLYNFNK78
72 / VP39 / 350 / MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETGLVASVPDGPELYNPIRSSDIMKSQPNRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLRNDFISRANPNATLGGGVGALAGPAPGVVLGEAGGGVAA / 62MVLPIFDEDDNQFK75
38 / ETS / 89 / MIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYALALKLNSLINNI / 9WHLLSDNVLLK19
87 / P45 / 387 / MCAYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSFENQANNTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVLSILNAQCNGFSTAANGNRLLLPFKNFMIKMGRNTNMKKVNKIASTVLIGFYLRHYLESLPNKAYPVAELELRNVCRFIMSKYSDENINLLIHKLKLIKIDICNVLMTEMIVPESFIRHIITKYQLDNEISLLIELNHDCFNK / 53GLTFFTEFNK62, 308AYPVAELELR317
98 / 82 / MSILNVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDKKIAQRILIKIYTIK / 27TCLDIALDNLK37
57 / 262 / MLQQKLNKLKDNLNTFSSKSVVCARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVYKPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFNKLVRPYCNDYVNELEKQFKKYYRIQLKNLNKLINLLKI / 82AYGVTLTNNSVCVYKPTVCK101
19 / LEF-6 / 173 / MVFDVYYNGYYVEKKFSKEFLIHIAPDLKNSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPDGTKFVSHVYNRSIRTHSTTVKRTDSSHRLKSQVVDKRPRRSLDSPRLDGYVLASSPIPHTDWNEELKLYAQSHGYDDDDDDLEDGEIDERDSLKSLNNHLNDLNVLEKQ / 19EFLIHIAPDLK29
93 / 67 / MDNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKLMCKENMPGEHDHKFYNRGYNKENKYK / 30SVYENITYVR39
29 / 217 / MRNAAGLFMIIEPDKAVLLCARRAYRSANAPAADINDTFLEKISIPRGHRDCCDAKVYETAVREFVEETGRFFDSAFIYKFPFTLQWKDDGVTYKYLIYVGVVRGNLIDVNAKPNTYTVKLLPGTFGNDYRIMLKPRRFNCEITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHALRRV / 190QLQDFFYATLK200
65 / 104 / MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEYNLKRKCSKYFKLRLIKAKPLLLHKFLLANKL / 23LYTGITSNLNR33, 98FLLANKL104
104 / Cysteine proteinase / 323 / MNKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGIIKYCFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVIY / 102VILLDQPPGKGPLEFDWR119, 209MNSNKFLVQVK219, 224YIIVYEEK231, 303VQQNINACGMRNELASTAVIY323
7 / EGT / 506 / MTILCWLALLSTLTAVNAVNILAVFPTPAYSHHIVYKVYIEALAEKCHNVTVVKPKLFAYSTKTYCGNITEVNSDMSVKQYKKLVTNSAMFRKRGVVSDTDTVTAANYLGLIEMFKDQFDNINVRNLIANNQTFDLVVVEAFADYALVFGHLYDPAPVIQIAPGYGLAENFDTVGAVARHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKILANMSNALLKQQFGPDTPTIEELRNKVQLLLLNLHPIFDNNRPVSPSVQYLGGGIHLVKSAPLTKLSPVIDAKMNKSKSGAIYVSFGSSIDTKSFANEFFYMLINTFKALDNYTILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMVCLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYALINNDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVLSIVMNHIAHF / 222QQFGPDTPTIEELR235
130 / PTP / 168 / MFPARWHNYLQCGQVIKDSNLICFKTPLQPELFAYVTSEEDVWTTEQIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYVQDLLI / 133YLMHTLGIAPQEAINR148
69 / P95 / 839 / MMSGVMLLVFAIFLIIAFTLIYLAIYFKFDETTYTKRLQVMIEYIKRTNADEPTPNVIGYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFDFLNQKLQPVDRIVHDRVRANDENPNEFILSGDKDDVTMKCPAYFNFDYAQLKCVPVPPCDNKPAGRYPMDERLLDTLVLNQHLDKDYSSNEHLYHPTFYLRCFANGAHAVEECPDNYTFDAKTRQCKVNELCENRPDGYILSYFPSNLLVNQFMQCVSGRHVVRECPANKIFDRNLMSCVEAHPCTFNGAGHTYITADISDAQYFKCLNNNESQLMTCINRIRNSDNQYECSGDSRCIDLPNGTGQQVFKHADDDISYNSGQLVCDNFEIISNIECDQSNVFENKLFMDKFRLNMQFPTEVFDGTACVPATADNVNFLRSTFAIENIPNHYDIDMQTSMLGKIEMIKQLVSKDLSLNNDAIFAQWLLYARDKNAIGLNPLTGEPIDCFGNNLYDVFDARRANVCKDLGKSVLKTLNFGDGEFLNVLSDTLTGKDEDYRQFCAISYENGQKIVENEHFQRRILTNILQSDVCANIYTTLYQKYTTLNPKYTTTPLQYNRILVKRPKNIEIYGANTRLKNATIPKNATTISPVFNPFENQPNNRQNDSISPLFNPFQTTDAVWYSEPDGDEAVAPPPTAPPPPSEPEPEPEPELPSPLILDNKDLFYSCHYSVPFFKLTSCHAENDVIINALNELRNNVKVDADCESAKDLSHVLNAYAYVGNGIGCRSAYDGDAIVVKKEAVPSHVYANLNTQSNDGVKYNRWLHVKNDQYMACPEELYDNDEFKCNVESDKLYYLDNLQEDSIV / 619NATTISPVFNPFENQPNNR637
117 / EXON0 / 261 / MIRTSSHVLNVQENIMTSNCASSPYSCEATSACAEAQQVMIDNFVFFHMYTADIQIDAKVQCGVRSAAFAIIDDKHLEMYKYRIENKFFYYYDQCADIAKPDRLPDDDGACCHHFIFDAQRIIQCIKEIEGAYGVRDRGNVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK / 139GNVIVFYPYLKQLR152
116 / ME53 / 451 / MNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLERSISSSIVSKKPVVNRKDGYFVPPEFGNKLESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLKFSTNYIMGYINSKDMRMTGKFASSSVKYKKTTEQHMSDSRCTTCNYRFKDNTRAWFLYVVVHIEKPLDDSDRIDICCQKCYLYHNVPKTSYEIYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVKELKIDDHNCKVFEIIRRIIRNHKEPNERIQTIDLSTTGGLVLRETYTNIVLQRYRSMCTRPDAADDVNCFILQEPSEMMAALQDNRFSGIKGTVFATVKVKKFTEVLDGGAITFPSRPTINNYCKLCKKTKLYYKNPVLYCTKCGFTNVYHFPEYSKLVYYSKAIKNFEMHNEMIIYYDLKMYKKLINIVNNNV / 443LINIVNNNV451
85 / 362 / MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQNTILNNNAAIASQYAAGNAGVVVAAPASAHPTPRPVINLFARANAVAPAQPSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHSLFKLLETTFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYAKIVLLQNVASQRDKRTTLEELLIERGEKIQMLQPQQYINSGTEIPFCDDSEFLNRLLKHIDPYPLSRMYYNAANTMFYTTMENYAVSNCKFNIEDYNNIFKVMENIRKHSNKNLNDQDELNIYLGVQSSNAKRKKY / 328VMENIRK334
125 / 299 / MYILIMLGLNIFIETVYNFSDHTMERYHPYQRAPWNASIFKKNYNNVKVASYIEVPYTTNNADVEMTDTTNAPSRPKSKARRRLDFTNMAPQPCCIDDGNFAKPLL / 49VASYIEVPYTTNNADVEMTDTTNAPSRPK77
67 / 234 / MTTTTTKTTQPPLSMSKKKTPTLLESISKKISTTETFQRLRNKNLTTLNKIKYDSELLLHYLYDDQQNKNSDYANNNINVIKISKVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKKELRDYIKGENSFNVAFKNCESILCRRISFQTVLMTCAVLLLLFNVEKFSMINLLIILLILLSLFCHNNYIISNPCIEFCNHKSTNKKYDR / 121TFQTIHTDGLIIK133
114 / P10 / 70 / MSKPNVLTRILDAIAETNTKVDSVQTQLNGLEESFQPLDGLPAQLTDFNTKISEIQSILTGDTAPDPPDS / 52ISEIQSILTGDTAPDPPDS70
81 / BRO-c / 318 / MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSNDVIFSSDYVPNSMNVLNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIARMNSLRNAQ / 30FVAKDIASSLK40, 177DAETARQDCENAR189
107 / GP16 / 106 / MNFWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWDAVVKNGKKISNLDEKINVLLTKNGVVNNVLNVQ / 96NGVVNNVLNVQ106
115 / P74 / 645 / MAVLTAVDLTNASRYAIHMHRLEFISRWRTRFPHILIDYTLRPASSDDDYYVPPKLADRALAVKLTFSKRGCESMSCYPFHETGVVSNTTPFMYTQTSETRVGYAQPACYHLDRAAAMREGAENKVQSAEFRYTPDNRCILVDSLSKMYFNSPYLRTEEHTIMGVDDVPAFNVRPDPDPLFPERFKGEFNEAYCRRFGRNLFNGGCSFRWWESLVGFVLGDTILVTFKMLANNVFSELRNFDYRAPSSILPPRPNVDSNAILAQWRSVRDTTTDLEFEKLFTKRPTLNDLGMIVDGSPVQITYTAETGFTKTPITYNYRGTERVHVEHFEALDRSISDQDLESIITKFLEDYAIIFGIATDAGFEMLMSGFKSMLKKINTTLIPALKRMLVSTTRRVTARILGETYKAAIVHSFNAIAIKTLTTTAKALTRIAIKASSVIGIVLILLTLADLVLALWDPFGYNNMFPREFPDDMSRTFLTAYFESLDNTTSREIIEFMPEFFSDMVETDDKATFESLFHLLNYVTSLEVNSDGQMLKLDEGDKIEDFDESTLVGKALATSSLYTRMEFMQYTFRQNTILSMNKKNNNFNQIIMGLFATNTIVAFTAFVIHKQLIFFIFFVIFLMITFYYIVKESYGYYKTIDLLF / 229MLANNVFSELR239
128 / PE38 / 309 / MPRDTNNRRRHRSTPYERPTLEDLHRQLEDALERRYQMRRRQRQNRLRTIQIKQQRMMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSLVYSTISELFIENRVHSIQNYVYAGTSGAASSCDVNVTVNFGFEN / 222LNEQVQELQR231
55 / LEF-3 / 385 / MATKRFFSGESSGEPLIKRMAMANSPKKIRENYKRINGKLMGKMTLSIDNEYYYTFRIMSDNKIQEYYGDSQSFKDMEEGKCYDISLNYVKTKFSQMIQINEYKECEMEIETAIPLSAYLTNKHFENEDSVNIIVKYKFIYKKINSNLYKIVFEVAYKNFNDDSDVVQVECFVNAKTLMNLFKNNIKGSDDINEVFKYLKDNENQIFTIYNIKCQQIFNGANVYMNWNVVNSTRIELCEAKENEAYSNLQNCTNARINISRSNKRVASYNVNMLKSELEENDMSDNKFIVQFKSDDLNVADSDDRSTSSDSSKWNKSVFYVNTNKKTEADSLQKLCADFNQISMLLEDNLIKVTIYVTVENGENGNMNVLGLLKYDEDENDYTFL / 266VASYNVNMLK275

SupplementaryTable S9. Host proteins identified in the M5 section of the gel.

Protein / Annotation / Size(amino acids) / Sequence / Sequence(s) of corresponding peptide(s)
BGIBMGA002429-PA / Cyclophilin type peptidyl-prolyl cis-trans isomerase/cyclophilin-like domain (CLD) / 165 / MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA / 56VIPNFMLQGGDFTNHNGTGGK76, 77SIYGNKFEDENFTLK91, 92HTGPGILSMANAGADTNGSQFFITTVK118, 119TSWLDGRHVVFGNVVEGMEVVK140, 126HVVFGNVVEGMEVVK140, 126HVVFGNVVEGMEVVKQIETFGSQSGK151
BGIBMGA004881-PA / RNA recognition motif / 252 / MVPQTKVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGGVISVERGRIKERGQRGGGRGGRGSMRGGMERRGGGPVRHAPPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALMDRGPRDAYAPPAPAYPDERYQNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYVPQYMQPPLGR / 7VFVGSLPQGSKPEDLRK23, 28FGVVTECDIMNR39, 57ALHNSTFNGGVISVER72
BGIBMGA002981-PA / Profilin / 126 / MSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGGVTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCGY / 33SEGFEISKDEVAK45, 46IVAGFENESLLTSGGVTIAGTR67, 92TQQAVVISLYEEPIQPQQAASVVEK116
BGIBMGA007092-PA / Calponin homology domain(a family of actin binding domain) / 173 / MDVINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGINFGNTRHM / 8YSEELAHESLEWIR21, 22MITGEPENTSGDMDNFYEVLK42, 71CMENINAFLEAAR83, 84QLGVPAQETFQTVDLWER101, 102QNLNSVVICLQSLGR116, 145AGQGVISLQYGSNK158
BGIBMGA001106-PA / Ribosomal protein L21e / 159 / MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA / 64VYNVTAHALGVIVNK78, 64VYNVTAHALGVIVNKR79, 137AAHIVSGTEKPVLLAPIPYEFVA159
BGIBMGA006867-PA / Ribosomal protein S8 / 129 / MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF / 79FDVPINDIER88, 97QFGYLVLTTSGGIMDHEEAR116
BGIBMGA013100-PA / LSm (RNA-binding protein) / 130 / MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFKRQGNKPTAGRGKSAILRAQAAGRGRAGGRGGGHRGGWQGGSGPSRR / 9VLHEAEGHVVTCETNTGEVYR29, 55VAQLENVYIR64
BGIBMGA001549-PA / Ubiquitin / 152 / MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM / 12TITLEVEPSDTIENVK27, 64ESTLHLVLR72, 131TLSDYNIQKESTLHLVLR148
BGIBMGA004331-PA / FK506 binding protein / 108 / MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE / 2GVTVETISPGDESTYPK18, 19SGQTVVVHYTGTLTNGKK36
BGIBMGA011282-PA / Ribosomal S13/S15 N-terminal domain / 151 / MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA / 44GLTPSQIGVMLR55, 77AMGLAPDLPEDLYYLIK93
BGIBMGA009106-PA / glutathione S-transferase 2 / 416 / MVKTKAERLAQQRLCKRRKYAEIKNDPELWALEKEKQRAKYQKRKSEKKQTSITEKSPREKRQIRKNWKQNSKKYRQMPESFPEETNNHVVDPIGLFTKEDLQKAQRKIRITWNYTEAGHGKGGPDGVGAVLKRTADRLVNFGRDVGDFESFCEIIKDNVESVVIKIVNEETIKQKENLLPKNLKPFRGTLSIHQVLWDILSERLTLRTKMPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDFVFTSMFDYLKTMLQIPDLEVQYPAFKKVLQSVLTQPKVKAFLDLGRPYEFEF / 244VLSADWPDFKPK255, 256TPFGQMPVLVIDGK269, 375TMLQIPDLEVQYPAFK390, 404AFLDLGRPYEFEF416

Supplementary original and unprocessed figures.

SupplementaryFigure S1. SDS-PAGE analysis of the proteins associated with the BmNPV polyhedra matrix (lane P) and ODV (lane O). Polyhedra in infected cells were purified.The ODVs were released and pelleted by continuous sucrosecentrifugation. Proteins of the ODV pellet and sampleover the topgradient wereresolved on SDS-PAGE and made visible usingCoomassie brilliant blue staining. Lane M, the protein marker.

SupplementaryFigure 2A.Western blot analysis of HSP70-4 localization in the BmNPV polyhedra matrix.About 1.0 (lane 1), 0.5 (lane 2), 5.0 (lane 3) and 10.0 (lane 4) μg of samples were loaded for SDS-PAGE and a Western blot analysis.Lane M, the protein marker.

SupplementaryFigure 3A. Western blot analysis of ubiquitylated proteins in theBmNPV polyhedra matrix using a mouse monoclonal anti-ubiquitin antibody clone FK2.

SupplementaryFigure 3B.Western blot analysis of ubiquitylated proteins in theBmNPV polyhedra matrix using a mouse monoclonal anti-ubiquitin antibody clone FK1.

SupplementaryFigure 3C.Western blot analysis of ubiquitylated proteins in theBmNPV polyhedra matrix using a rabbit monoclonal anti-ubiquitin antibody Lys48-specific clone Apu2.

SupplementaryFigure 3D.Western blot analysis of ubiquitylated proteins in theBmNPV polyhedra matrix using a rabbit monoclonal anti-ubiquitin antibody Lys63-specific clone Apu3.

SupplementaryFigure 3E.Western blot analysis of ubiquitylated proteins in theBmNPV polyhedra matrix using a mouse monoclonal anti-linear poly-ubiquitin antibody clone LUB9.

SupplementaryFigure 4.Western blot analyses of certain ODV-associated proteins in the BmNPV polyhedra matrix. The polyhedra matrix (lane P) and ODV (lane V) fractions were loaded for Western blot analyses.