Online Resource 1: pedigree 2.2 Output
Using molecular pedigree reconstruction to evaluate the long-term survival of outplanted hatchery-reared larval and juvenile Northern Abalone (Haliotiskamtschatkana).
Conservation Genetics
Kaitlyn D. Read, Matthew A. Lemay, Stephanie Acheson, Elizabeth G. Boulding*
*Department of Integrative Biology, University of Guelph, Ontario, N1G 2W1 Canada
*Email:
Full-sib families inferred from pedigree 2.2.
B = b-group
R = r-group
T = t-group
H = hatchery, unknown spawning group
WS = wild-sampled abalone from Scott’s Bay in 2008
WB = wild-sampled abalone from Scott’s Bay in 2009
Parameters:
Full sibling constraint: ON
Temperature: 10.0
Weight: 5.0
Seed: 11755
Stopped at iteration: 5000000Score : 493266.20
1
size=115
cohesion= 0.443
repulsion= 0.912
HL60 T10 T34 T121 T124 T129 B1 B2 B5 B7 B12 B13 B14 B15 B20 B21 B22 B23 B24 B25 B26 B29 B30 B33 B34 B35 B36 B37 B38 B39 B40 B41 B42 B43 B44 B45 B47 B48 B49 B50 B51 B53 B54 B56 B57 B58 B59 B60 B61 B64 B65 B67 B68 B69 B70 B71 B73 B77 B79 B81 B82 B90 B92 B94 B95 B101 B102 B103 B104 B105 B106 B107 B109 B110 B112 B114 B117 B119 B120 B121 B123 B124 B125 B126 B127 B128 B129 B130 B131 B134 B135 B137 B138 B139 B141 B142 B145 B146 B147 B148 B150 B157 B158 B159 B160 B162 B164 B169 B171 B173 B176 B177 B178 R26 R116
2
size=84
cohesion= 0.500
repulsion= 0.855
WG24 HQ73 HPB786 HG49 HG76 HG77 HQ11 HQ60 HPB261 T1 T5 T6 T11 T12 T16 T20 T22 T24 T25 T26 T27 T28 T31 T32 T35 T40 T41 T42 T44 T48 T51 T52 T53 T54 T57 T59 T60 T62 T66 T67 T68 T74 T75 T79 T81 T84 T85 T86 T87 T88 T89 T90 T92 T93 T94 T97 T101 T102 T104 T105 T106 T107 T109 T112 T114 T118 T120 T125 T126 T131 T132 T133 T136 T137 T140 T141 T146 T153 B74 B75 B87 B100 B118 R12
3
size=69
cohesion= 0.660
repulsion= 0.847
HL50 HG47 HL89 HG04 B8 B55 B78 B116 B140 R2 R8 R10 R20 R21 R25 R31 R32 R35 R37 R40 R42 R44 R45 R48 R51 R55 R58 R79 R80 R83 R85 R86 R88 R89 R92 R97 R99 R101 R104 R106 R107 R108 R112 R114 R119 R120 R121 R122 R124 R125 R128 R132 R134 R135 R136 R137 R138 R139 R143 R151 R155 R157 R159 R161 R167 R190 R198 R200 R206
4
size=35
cohesion= 0.604
repulsion= 0.812
HPB794 HL93 HQ5 HL43 HL80 HL61 HL70 HG18 HL72 B96 B168 R9 R15 R30 R41 R54 R61 R63 R65 R67 R113 R145 R148 R163 R166 R184 R186 R194 R195 R196 R197 R199 R202 R205 R213
5
size=27
cohesion= 0.773
repulsion= 0.868
WY52 WG06 HL87 R3 R5 R13 R19 R22 R33 R34 R59 R60 R70 R72 R131 R133 R140 R141 R144 R146 R149 R164 R168 R175 R191 R210 R214
6
size=22
cohesion= 1.568
repulsion= 0.986
HG30 HG56 HR07 HQ58 HG32 HQ13 HG60 HG43 HG22 HQ25 HQ26 HQ70 HG53 HR02 HPB175 HG62 HQ64 HG91 HQ99 T3 T38 T100
7
size=20
cohesion= 1.446
repulsion= 0.912
B9 B46 B52 R6 R16 R18 R23 R24 R28 R38 R49 R50 R52 R75 R77 R81 R102 R118 R127 R172
8
size=19
cohesion= 0.795
repulsion= 0.920
B6 B16 B19 B27 B32 B63 B108 B111 B113 B115 B122 B132 B143 B149 B152 B165 B166 B167 B179
9
size=18
cohesion= 0.717
repulsion= 0.786
B91 R11 R43 R69 R84 R87 R91 R103 R105 R126 R150 R162 R170 R176 R177 R178 R181 R204
10
size=17
cohesion= 1.268
repulsion= 0.912
B151 B155 R4 R7 R29 R36 R53 R57 R62 R71 R73 R76 R82 R142 R152 R154 R211
11
size=11
cohesion= 1.186
repulsion= 0.920
HG54 HPB792 HQ89 HQ54 HPB172 HQ81 HR05 HPB170 HR09 T8 T143
12
size=10
cohesion= 0.726
repulsion= 0.755
HQ28 T7 T29 T36 T43 T78 T91 T95 T103 T127
13
size=10
cohesion= 1.503
repulsion= 0.881
R14 R27 R56 R90 R96 R100 R110 R115 R156 R183
14
size=9
cohesion= 2.046
repulsion= 1.059
WY41 T83 T98 T130 T135 T138 T139 T145 T148
15
size=9
cohesion= 0.626
repulsion= 0.829
WY40 HG27 R98 R123 R147 R189 R193 R201 R203
16
size=8
cohesion= 0.977
repulsion= 1.003
HPB584A HPB584 R93 R130 R165 R185 R187 R188
17
size=8
cohesion= 0.387
repulsion= 0.855
HQ18 T4 T9 T14 T47 T72 T113 T142
18
size=7
cohesion= 0.799
repulsion= 0.821
HR00 WGT2 T61 T108 T110 T117 T119
19
size=7
cohesion= 0.799
repulsion= 0.799
B85 B89 B93 B97 B170 B172 B175
20
size=7
cohesion= 1.989
repulsion= 1.203
WG26 HQ42 HG25 HQ57 HG57 HG89 HG92
21
size=7
cohesion= 0.591
repulsion= 0.795
T30 T56 T64 T111 T122 T144 T149
22
size=7
cohesion= 0.656
repulsion= 0.712
T15 T18 T21 T23 T49 T50 R180
23
size=6
cohesion= 1.255
repulsion= 1.003
HG11 HL95 HG21 HQ69 HG72 R208
24
size=6
cohesion= 1.902
repulsion= 1.033
WS18 WS19 HQ34 T17 T46 T76
25
size=6
cohesion= 1.351
repulsion= 0.973
R1 R46 R66 R153 R169 R192
26
size=6
cohesion= 0.430
repulsion= 0.716
WY46 WY47 T82 T147 T154 B163
27
size=5
cohesion= 2.037
repulsion= 0.873
T13 T37 T45 T55 T123
28
size=5
cohesion= 0.808
repulsion= 0.812
B10 B133 R17 R94 R160
29
size=5
cohesion= 0.873
repulsion= 0.860
B144 B161 B174 R64 R109
30
size=5
cohesion= 0.938
repulsion= 1.051
WB31 HL65 B156 R173 R182
31
size=5
cohesion= 1.103
repulsion= 0.960
PB582 HQ72 HR03 B11 B62
32
size=4
cohesion= 1.902
repulsion= 1.198
WS21 HG14 HL74 HL48
33
size=4
cohesion= 2.593
repulsion= 1.099
HG41 HQ37 B3 B86
34
size=4
cohesion= 1.768
repulsion= 1.238
WH16 WY32 B83 R179
35
size=4
cohesion= 1.355
repulsion= 1.059
WS5 HR06 HQ32 B88
36
size=4
cohesion= 0.465
repulsion= 0.981
T39 T115 B66 B153
37
size=4
cohesion= 2.081
repulsion= 1.459
WH5 WH22 WY30 T63
38
size=4
cohesion= 1.520
repulsion= 1.003
B80 R39 R95 R158
39
size=4
cohesion= 1.707
repulsion= 1.450
WH7 WS14 WS17 WB38
40
size=4
cohesion= 1.273
repulsion= 0.964
WB21 B4 B84 B154
41
size=4
cohesion= 2.841
repulsion= 1.190
T33 T58 T71 T77
42
size=4
cohesion= 0.595
repulsion= 0.877
R74 R129 R171 R207
43
size=4
cohesion= 0.699
repulsion= 1.185
WH20 WY3 WY11 T73
44
size=4
cohesion= 0.582
repulsion= 1.164
WS16 WGT1 T65 T150
45
size=4
cohesion= 1.116
repulsion= 0.990
HL94 R47 R78 R212
46
size=4
cohesion= 0.825
repulsion= 1.246
WH14 WS4 WS23 WY42
47
size=4
cohesion= 1.047
repulsion= 0.947
WB30 T19 T70 B72
48
size=4
cohesion= 0.521
repulsion= 0.964
WY22 T96 B98 R174
49
size=4
cohesion= 0.283
repulsion= 0.881
T69 B18 B136 R111
50
size=3
cohesion= 1.264
repulsion= 1.198
WS15 HPB580 T99
51
size=3
cohesion= 2.971
repulsion= 1.598
WY27 WY35 WY24
52
size=3
cohesion= 2.923
repulsion= 1.654
WH26 WY4 WB15
53
size=3
cohesion= 1.568
repulsion= 1.129
WB2 WY44 WY23
54
size=3
cohesion= 1.277
repulsion= 1.194
WY38 WB9 WY33
55
size=3
cohesion= 1.030
repulsion= 1.355
WS7 WS22 WB26
56
size=3
cohesion= 1.846
repulsion= 1.733
WH17 WB37 WY43
57
size=3
cohesion= 2.111
repulsion= 1.676
WS12 WB25 WY8
58
size=3
cohesion= 1.507
repulsion= 1.442
WH2A WH8 WB22
59
size=3
cohesion= 0.921
repulsion= 1.390
WY51 WB36 WY21
60
size=3
cohesion= 0.656
repulsion= 0.955
T2 T134 T151
61
size=3
cohesion= 0.769
repulsion= 1.211
WY25 WB35 T116
62
size=3
cohesion= 0.647
repulsion= 1.077
WH21 WB12 B99
63
size=3
cohesion= 0.582
repulsion= 1.455
WH18 WY50 WB17
64
size=2
cohesion= 2.884
repulsion= 1.481
WY2 WB45
65
size=2
cohesion= 2.311
repulsion= 1.403
WY15 WY28
66
size=2
cohesion= 3.440
repulsion= 1.481
WH13 WS24
67
size=2
cohesion= 2.649
repulsion= 1.533
WB11 WB44
68
size=2
cohesion= 0.408
repulsion= 1.094
WY53 WY19
69
size=2
cohesion= 3.062
repulsion= 1.455
WH4 WY6
70
size=2
cohesion= 2.098
repulsion= 1.667
WB34 WB1
71
size=2
cohesion= 1.876
repulsion= 1.385
WB20 WY26
72
size=2
cohesion= 1.351
repulsion= 1.789
WB40 HB50
73
size=2
cohesion= 3.714
repulsion= 1.633
WH12 WB5
74
size=2
cohesion= 3.266
repulsion= 1.485
WY1 WB18
75
size=2
cohesion= 1.611
repulsion= 1.363
WS2 WS3
76
size=2
cohesion= 1.872
repulsion= 1.290
WB24 WGT3
77
size=2
cohesion= 1.455
repulsion= 1.502
WH15 R209
78
size=2
cohesion= 1.655
repulsion= 1.720
WY37 WB28
79
size=2
cohesion= 2.306
repulsion= 1.694
WS1 WB19
80
size=2
cohesion= 1.182
repulsion= 1.520
WY12 T128
81
size=2
cohesion= 1.798
repulsion= 1.572
WH19 WB23
82
size=2
cohesion= 1.777
repulsion= 1.407
WB16 WB29
83
size=2
cohesion= 1.985
repulsion= 1.680
WB13 WY45
84
size=2
cohesion= 0.096
repulsion= 1.298
WH1 WB43
85
size=2
cohesion= 1.998
repulsion= 1.372
WY16 WY18
86
size=2
cohesion= 1.203
repulsion= 1.724
WWB8 WY29
87
size=2
cohesion= 1.711
repulsion= 1.346
WB32 WB10
88
size=2
cohesion= 2.267
repulsion= 1.607
WS6 WY9
89
size=2
cohesion= 0.873
repulsion= 1.433
WS25 WY36
90
size=2
cohesion= 0.656
repulsion= 1.563
WS8 WB7
91
size=2
cohesion= 0.843
repulsion= 1.481
WB42 WB49
92
size=2
cohesion= 0.669
repulsion= 1.507
WY49 WB14
93
size=2
cohesion= 1.968
repulsion= 1.594
WY31 WB39
94
size=2
cohesion= 2.150
repulsion= 1.711
WY13 WY48
95
size=2
cohesion= -0.491
repulsion= 1.494
WY20 WY10
96
size=2
cohesion= 1.764
repulsion= 1.528
WY7 WB3
97
size=2
cohesion= 0.817
repulsion= 1.433
WH1A WY34
98
size=2
cohesion= 1.182
repulsion= 1.654
WS9 T80
99
size=2
cohesion= 0.413
repulsion= 1.463
WH3 WB47
100
size=2
cohesion= -0.008
repulsion= 1.363
WY5 HG93
101
size=2
cohesion= 1.099
repulsion= 1.307
WY17 WB27
102
size=2
cohesion= -0.438
repulsion= 0.955
B17 R68
103
size=2
cohesion= 0.200
repulsion= 1.546
WY14 WB41
104
size=2
cohesion= -0.599
repulsion= 1.107
WB6 B28
105
size=2
cohesion= 0.882
repulsion= 1.450
WB4 WB48
106
size=2
cohesion= 0.296
repulsion= 0.764
T152 B31
107
size=1
cohesion= 0.000
repulsion= 1.390
WY39
108
size=1
cohesion= 0.000
repulsion= 1.620
WB33
109
size=1
cohesion= 0.000
repulsion= 1.133
R117
110
size=1
cohesion= 0.000
repulsion= 1.559
WB46
111
size=1
cohesion= 0.000
repulsion= 1.494
WH6
112
size=1
cohesion= 0.000
repulsion= 1.190
B76