Supplementary Table 2: Genes with a TWGTTGACYWWWW-motif within their -600bp region proximal to the ATG translation start site.

AT1G28370ERF domain protein 11 (ERF11)

AT1G29180DC1 domain-containing protein

AT1G50680AP2 domain-containing transcription factor, putative

AT1G55430DC1 domain-containing protein

AT1G55440DC1 domain-containing protein

AT1G69150DC1 domain-containing protein

AT1G69170squamosa promoter-binding protein-like 6 (SPL6)

AT2G33710AP2 domain-containing transcription factor family protein

AT2G34620mitochondrial transcription termination factor-related / mTERF-related

AT2G42360zinc finger (C3HC4-type RING finger) family protein

AT2G44745WRKY family transcription factor (WRKY12)

AT3G01970WRKY family transcription factor (WRKY45)

AT3G05690CCAAT-binding transcription factor (CBF-B/NF-YA) family protein

AT4G01740DC1 domain-containing protein

AT4g22810DNA-binding protein-related

AT4g31650transcriptional factor B3 family protein

AT5G06510CCAAT-binding transcription factor (CBF-B/NF-YA) family protein

AT5G11350endonuclease/exonuclease/phosphatase family protein

AT5G15700DNA-directed RNA polymerase (RPOT2)

AT5G35970DNA-binding protein, putative

AT5G50470CCAAT-box binding transcription factor Hap5a, putative

AT5G60120AP2 domain-containing transcription factor, putative

AT5G65410zinc finger homeobox family protein / ZF-HD homeobox family protein

AT1G09740ethylene-responsive protein, putative

AT1G11040DNAJ chaperone C-terminal domain-containing protein

AT1G17420lipoxygenase, putative

AT1G68760MutT/nudix family protein

AT1G75690chaperone protein dnaJ-related

AT2g15220secretory protein, putative, similar to NtPRp27 (Nicotiana tabacum)

AT2G43620chitinase, putative

AT3G10200dehydration-responsive protein-related

AT3G12710methyladenine glycosylase family protein

AT3G22620protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

AT3g50020serine protease inhibitor, potato inhibitor I-type family protein

AT4g12545protease inhibitor/seed storage/lipid transfer protein (LTP) family protein,

AT4G12550protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

AT4G21340ethylene-responsive protein-related

AT4G2520023.6 kDa mitochondrial small heat shock protein (HSP23.6-M)

AT5G17970disease resistance protein (TIR-NBS-LRR class), putative

AT5G56480protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

AT1g08890sugar transporter family protein)

AT2G27370integral membrane family protein

AT2G42580tetratricopeptide repeat (TPR)-containing protein

AT2G43710acyl-(acyl-carrier-protein) desaturase / stearoyl-ACP desaturase (SSI2)

AT3G08960importin beta-2 subunit family protein

AT3G61450syntaxin 73 (SYP73)

AT4G38350patched family protein

AT5G04770amino acid permease family protein

AT5G16880VHS domain-containing protein / GAT domain-containing protein

AT1G04440casein kinase, putative

AT1G08880histone H2A, putative

AT1G10430serine/threonine protein phosphatase PP2A-1 catalytic subunit (PP2A1)

AT1G11050protein kinase family protein

AT1G34420leucine-rich repeat family protein / protein kinase family protein

AT1G73670mitogen-activated protein kinase, putative / MAPK, putative (MPK15)

AT1G74070peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein

AT2g03610F-box family protein, contains F-box domain

AT2G21470SUMO activating enzyme 2 (SAE2)

AT2G269304-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (CDPMEK)

AT2G35510WWE domain-containing protein

AT3G10640SNF7 family protein

AT3G11840U-box domain-containing protein

AT3G20820leucine-rich repeat family protein

AT3G45980histone H2B

AT3G54650F-box family protein (FBL17)

AT4G05250ubiquitin family protein

AT4G28650leucine-rich repeat transmembrane protein kinase, putative

AT4G29500prolidase-related

AT5G02290protein kinase, putative

AT5G11940subtilase family protein

AT5G15710F-box family protein

AT5G35600histone deacetylase, putative (HDA7)

AT5G41720F-box family protein

AT5G66710protein kinase, putative

AT1G02410cytochrome c oxidase assembly protein CtaG / Cox11 family

AT1G11790prephenate dehydratase family protein

AT1G12550oxidoreductase family protein

AT1G14030ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative

AT1G14940major latex protein-related / MLP-related

AT1G2230014-3-3 protein GF14 epsilon (GRF10)

AT1G26340cytochrome b5, putative

AT1G28560snRNA activating complex family protein

AT1G30540ATPase, BadF/BadG/BcrA/BcrD-type family

AT1G30720FAD-binding domain-containing protein

AT1g32280protease inhibitor/ lipid transfer protein (LTP) family protein

AT1G50390fructokinase-related

AT1G51210UDP-glucoronosyl/UDP-glucosyl transferase family protein

AT1G63180UDP-glucose 4-epimerase, putative / UDP-galactose 4-epimerase,

AT1G64900cytochrome P450, putative

AT1G66200glutamine synthetase, putative

AT2G18570UDP-glucoronosyl/UDP-glucosyl transferase family protein

AT2G22230beta-hydroxyacyl-ACP dehydratase, putative

AT2G25355exonuclease-related

AT2G308402-oxoglutarate-dependent dioxygenase, putative

AT2G32520dienelactone hydrolase family protein

AT2G35710glycogenin glucosyltransferase (glycogenin)-related

AT2G47650NAD-dependent epimerase/dehydratase family protein

AT3G26610polygalacturonase, putative / pectinase, putative

AT3G27740glutamine-dependent carbamoyl-phosphate synthase small subunit (CARA)

AT3G496202-oxoacid-dependent oxidase, putative (DIN11)

AT3G53810lectin protein kinase, putative

AT4g11630ribosomal protein L19 family protein

AT4G11820hydroxymethylglutaryl-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase

AT4G13940adenosylhomocysteinase / S-adenosyl-L-homocysteine hydrolase / AdoHcyase (SAHH)

AT4g18940cyclic phosphodiesterase, putative, similar to cyclic phosphodiesterase (Arabidopsis thaliana)

AT4G20830FAD-binding domain-containing protein

AT4g24810ABC1 family protein

AT4G27710cytochrome P450 family protein

AT4G34890xanthine dehydrogenase, putative

AT5G02620ankyrin repeat family protein

AT5G10230annexin 7 (ANN7)

AT5G13420transaldolase, putative

AT5G13810glutaredoxin family protein

AT5G49690UDP-glucoronosyl/UDP-glucosyl transferase family protein

AT5g53910(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase

AT5G56350pyruvate kinase, putative

AT5G56490FAD-binding domain-containing protein (PROPEP2)

AT5G58560phosphatidate cytidylyltransferase family protein

AT5G61250glycosyl hydrolase family 79 N-terminal domain-containing protein

AT1G01570fringe-related protein

AT1g02405proline-rich family protein, contains proline-rich region

AT1G09190pentatricopeptide (PPR) repeat-containing protein

AT1G20370tRNA pseudouridine synthase family protein

AT1G59500auxin-responsive GH3 family protein

AT1G72530plastid developmental protein DAG, putative

AT1g75700abscisic acid-responsive HVA22 family protein

AT1G76120tRNA pseudouridine synthase family protein

AT2G25240serpin, putative / serine protease inhibitor, putative

AT2G45110beta-expansin, putative (EXPB4)

AT3G19820cell elongation protein / DWARF1 / DIMINUTO (DIM)

AT3G46170short-chain dehydrogenase/reductase (SDR) family protein

AT4G05090inositol monophosphatase family protein

AT5G01040laccase family protein / diphenol oxidase family protein

AT5g11880diaminopimelate decarboxylase, putative / DAP carboxylase, putative

AT5g28000Bet v I allergen family protein, similar to Csf-2 (Cucumis sativus)

AT5G35735auxin-responsive family protein

AT5G39840ATP-dependent RNA helicase, mitochondrial, putative

AT5G58440phox (PX) domain-containing protein

AT1G10150expressed protein

At1g13620hypothetical protein

AT1G23790expressed protein

AT1G23830expressed protein

AT1g27110hypothetical protein

AT1G36020hypothetical protein

AT1G36980expressed protein

AT1G43130expressed protein

AT1G50150hypothetical protein

AT1g51630expressed protein

AT1G53345expressed protein

AT1g53625expressed protein

AT1g55710hypothetical protein

AT1g66190expressed protein

AT1G74790expressed protein

AT2g22795expressed protein

AT2G24970expressed protein

AT2G27375hypothetical protein

AT2g34170expressed protein

AT2g38630expressed protein

AT2g40113hypothetical protein

AT2G46420expressed protein

AT3G05830expressed protein

AT3G07510expressed protein

AT3g12970expressed protein

AT3G20760hypothetical protein

AT3G28090hypothetical protein

AT3G29570hypothetical protein

AT3G47610expressed protein

AT3G52060expressed protein

AT3G52070expressed protein

AT3G52360expressed protein

AT3G56250expressed protein

AT3G60420expressed protein

AT4g01735expressed protein

AT4g07696hypothetical protein

AT4G28290expressed protein

AT4G38360expressed protein

AT5g05040expressed protein

AT5G05060expressed protein

AT5G14990hypothetical protein

AT5g19230expressed protein

AT5G22390expressed protein

AT5G36710expressed protein

AT5g36800expressed protein

AT5G43230hypothetical protein

AT5G57790expressed protein

AT5G58375expressed protein

AT5G58575expressed protein

AT5G58650expressed protein

AT5G64400expressed protein