Title: Transcriptional regulation of NADP-dependent malate dehydrogenase: Comparative genetics and identification of DNA-binding proteins
Authors: Steffen Hameister 1,2,3, Beril Becker 1,3, Simone Holtgrefe 1, Inga Strodtkoetter 1, Vera Emmerlich 1, Jan E. Backhausen 1,4, Renate Scheibe 1
Supplementary material XXX correct in textXXX
XXX Length of Gap between MDH and .520 in Fig. 5XXX
1) DNA Sequences of overlapping regions and the NADP-MDH gene
2) DNA sequences used for the YOH screen XXX check text for sizesXXX
3) DNA sequences obtained with the YOH screen
1) A: Overlapping region 1: CLUSTAL W (1.82) multiple sequence alignment
Athaliana AGAGGAACT--CCCAAG-TAATGCCCACTGTTCTTT-----GAGAAGCTGAGTGAGAAAG 52
Landsberg AGAGGAACT--CCCAAG-TAATGCCCACTGTTCTTT-----GAGAAGCTGAGTGAGAAAG 52
Wassilesv AGAGGAACT--CCCAAG-TAATGCCCACTGCTCTTT-----GAGAAGCTGAGTGAGAAAG 52
Capetraea AGAGGAACT--ACCAAG-TAATGCCNANTGNTCTTT-----GANAAGCTGACTGAGAAAG 52
Arturrita AGAGGAACT--CCCAAG-TATTTCCCACTGCTCTTT-----GAGAAGCTGAGTGAGAAAG 52
Cbursa-pa AGATGAACT--CCCAAG-TAATGCCCACTGCTCTTT-----GAGAAGCTGAGTGAGAAAG 52
Awallichi CCTTGAAAT--NCCGAG-TAATGCCCACTGTTCTTT-----GAGAAGCTGAGTGAGAAAG 52
Cofficina AGGTGNCCTGAATCCGG-TAATCCCCATTGCTCTTC-----GAGAAGCTGATTGAGAAAG 54
SorghumI CACACACTTTTGCCAAA-ATTTTGCCACCGTTGCTA---ACCAATCGATGTGTAACGATG 56
SorghumII AGGCTAGTTAGTCTATG-ATTGGACAATAATTACTACAAACAAACGAAAGTACTATAGTG 59
Orysativa ATCAGCGCCAATCGAAACTCTTGCACATCGCCACCGACAACATCAAACCGAAGCGAAAGG 60
* * *
Athaliana G--AAATGGCAGTGTACCTGATG-TTAGTCTCACGAATTCGCTG-ATAGAGCTCAGGATC 108
Landsberg G--AAATGGCAGTGTACCTGATG-TTAGTCTCACGAATTCGCTG-ATAGAGCTCAGGATC 108
Wassilesv G--AAATGGCAGTGTACCTGATG-TTAGTCTCACGAATTCGCTG-ATAGAGCTCAGGTNC 108
Capetraea G--AAATGGCAGTGTACCCNATG-TTAGTCTCA-GAATTCGCTG-ANAGAGNCAGGGTCC 107
Arturrita G--AGATGGCAGTGTACCTGATG-TTAGTCTCGCGAATCCGCTG-ATAGAGCTCAGGATC 108
Cbursa-pa G--AAATGGCAGTGTACCTGATG-TTAGTCTCACGAATTCGCTG-ATAGAGCTCAGGATC 108
Awallichi G--AAATGGCAGTGTACCTGATG-TTAGTCTCACGAATCCGCTG-ATAGACCTCAGGATC 108
Cofficina T--TAATGGCAGTGTACCTACCG-TTACTCTCTCGTATTCGCTG-ATACGCCTCAGGATC 110
SorghumI A-GAAGTGCCATCACACTCTCTGAAAAGACTCAGGCCCTG---GCACTG---GCAGGACC 109
SorghumII TCGTGAAAATTTTATCTTCACGAACTAAACGTGCGGCCTAAACGAACAGTACGTGGGTTC 119
Orysativa T-ATCATGTAACTACA-TTGCAAATCAGTTGCTCGTCCAA---GTGTAGT-CGCAAAATG 114
* * *
Athaliana TC--CAAGGGCCTTCTTCAAATCACTCTCCCATTTCAACAAGTCAC---AAGTCACCAAA 163
Landsberg CC--CAAGGGCCTTCTTCAAATCACTCTCCCATTTCAACAAGTCAC---AAGTCACCAAA 163
Wassilesv CT--CGAGAGCCTTCTTAAAATCAGTCTCCCACTTCAACAAGTCAT---GAGTCACCAAA 163
Capetraea C----GAGAGCCTTCTTAAAATCAGTCTCCCACTTCAACAAGTCAT---GAGTCACCAAA 160
Arturrita CT--CAAGGGCCTTCTTCAGATCAGTCTCCCACTTCAACAAGTCAT---GGGTCACCAAA 163
Cbursa-pa CT--CAAGGGACTTCTTCAGATCAGTCTCCCACTTCAACAAGTCAT---GAGTCACCAAA 163
Awallichi CT--CAAGGGCCTTCTTTAGATCAGTCTCCCAATTCAACAAATCAC---GGCTCACCAAA 163
Cofficina CA--CAAGGGCCTTGTTAAGATCAGTCTCCCACTTCAACAAATCATCATGTGTCACCAAA 168
SorghumI GCAGGAAAGGCACTGAGCAAAG--ATGATGGTCGTGGGAGAATAAA------CAACCTTT 161
SorghumII TTGGTAACGATGAGAAGTTGTACCATCACACTCTTTTGAAAAGACGAGGATGCCGACTTT 179
Orysativa CGAGGAACAAAC--AATGGGGACCATCAACTGGCTATGAGCGAAATAGGATCCCATCCAC 172
* * * *
Athaliana TCGCTACCACTCTCCTTCAAAATCC--CAATCCTCTT-CGTCCATATCCTCTCAAGCG-- 218
Landsberg TCGCTACCACTCTCCTTCAAAATCC--NAATCCTCTTTCGTCCATATNCTCTCAAGCG-- 219
Wassilesv TTGCTCTCACTCTCCTTCAAAATCC--CAATCCTCTT-CGTCCATACCCTCTCNAGTA-- 218
Capetraea TTGNTCTCACTCTCCTTCAAAATCC--CAATTCTNTT-TGTCCATACCCTCTCAAGTA-- 215
Arturrita TCGCTCCCACGCTCCTTCAAAATAC--CAATTCGCTT-AGTCCATATCCTCTCAAGGG-- 218
Cbursa-pa TTGCTTTCACTCTTCTTCAAAATCC--CAATCCTCTT-AGTCCAAATCCTCTCAAGAG-- 218
Awallichi TCGCTCCCTCTCTCCTTCAAAATCC--CAATCCTCTT-CGTCCATATCCTCTCCAGAG-- 218
Cofficina TCGCTACCACTCTCTTTCAAATTCC--CAATCCGTTT-CTTCCATATCCTCTCTACGG-- 223
SorghumI TTTTTTTTTTGCCTTTGTAATAAAT--GTCCCCGCCGTCTCTCACGTAGTACGTAG---- 215
SorghumII GTGACTCAATACACTAGCGAAGATT--GTTGTGGGAGAATATAACCTTTTTTTTTGGTTG 237
Orysativa GACATCTGCTACACGAAGAAGGTTCTCCGAAGCGAAGCCCCCCGGAGGATGCGATGTGAT 232
* * *
Athaliana -CATCGGTGAACAAACCATCCG-AAGCAAACATTGGCCAC--ATAAATCTAAGCGTACAC 274
Landsberg -CATCGGTGAACAAACCATCCGCNAGCAAACATTGGCCAC--ATNAATCTNAGCGTACAC 276
Wassilesv -CCTCGGCGAACAAACCATCCG-NAGCAAGCATTGGCCAC--ATAAATCTAAGCGTGCAC 274
Capetraea -CCTCGGCGAACAAACCATCCN-AAGCAAGCATTGGCCAC--ATAAATNTAAGCGTGCAC 271
Arturrita -CGTCGGTGAAGAAGCCATCCG-AAGCAGACAATGGCCAC--ATGAATCTATGCGTGCAC 274
Cbursa-pa -CCTCGGTGAANAAACCATCCG-AAGCAAGCAGTGGCCAC--ATGAATTTAAGCGTGCAC 274
Awallichi -CCTCGGTGAAGAAACCATCCG-AAGGAAGCAGTGGCCAC--ATGAATCTAAGCGTACAC 274
Cofficina -CGTCGCTGAATAGCCCATCGG-AAGCAGACAATGGCCAC--ATGAATCTAAGCGTGCAC 279
SorghumI -TTTCGGTGTGGCTTTGTTTTAAAAGGGAACCAAATCTACCAATGAGTCTTTTTAAAAAG 274
SorghumII CCTTCATTTTGGTGTGCCTTTCTCTGGGAACCAAATCTGTCAATGAGTCTTTTTAAAAAT 297
Orysativa TCGTCGCT-AGTCATCCAAAAGTTGGAGAAATATTTTCACCTGGAGATTAGCATGGAGAA 291
** * * *
Athaliana TCAGTA---GCCGTCCAGCAATAAGCAGACTTGTGAGAATCCATGAGTAGCGAATGTTGC 331
Landsberg TCAGTA---GCCGTCCAGCAATAAGCAGACNTGTGAGAATCCATGAGTAGCGAATGGTGC 333
Wassilesv TCAGCA---GCCGTCCNACAATAAGCAGACTTGTGAGACTCCATGAGTAGCGAATGTTGC 331
Capetraea TCAGCA---GCCGTCCAACAATAAGCAGACTTGTGAGACTCCATGAGTAGCGAATGNTGC 328
Arturrita TCTACA---GCCGTCCAGCAATAAGCAGACTTGTGAGACTCCATGAGTAGCGAATGTTGC 331
Cbursa-pa TCAGCA---GCCGTCCAGCAATAAGCAGACTTGTGAGACTCAGTGAGTAGCGAATGTTGC 331
Awallichi TCAGCA---GCCGTCCAGCAATAAGCAGACTTGTGAGACTCCATGAGTAACGAATGTTGC 331
Cofficina TCAGCA---GCCGTCCAGCAATAAGCAGACTTGTGAGACTCAATGAGAAGCGAGTCTTGT 336
SorghumI AAGAAAAATACTGGTCAGCAA-AACTGAGATTCTCCAGC------AACGA------317
SorghumII AAAAAAAATGCTACCTGTAAA-AACTGTTATTCTCCAGTTCTTTTTAAAATGATTTTTTT 356
Orysativa AGAGAATAAATACCACAACAACGCCTTCAAGAAGGGAAAT-GACATCTAAGGATGTTACC 350
* ** * **
Athaliana TGC---AAGAGAAGCTTCTCAAGAATCTCGAGAAGATCGAGCATTCCCTC------378
Landsberg GGC---AAGAGAAGCTTCTCAAGAATCNCGAGAAGATCGAGCATTCCCTC------380
Wassilesv TGC---AAGAGAAGCTTCTCAAGAATCTCAAGAAGGTCAAGCATTCCCTC------378
Capetraea TGC---AAGAGAAGCTTNTCAANAATNTCAANAAGGTCAAGCATTCCCTC------375
Arturrita TGC---AACAGAAGCTTCTCAAGAATCTCGAGTAGGTCAAGCGTTCCTTC------378
Cbursa-pa TGC---GATAGAAGCTTCTCAAGAATCTCGAGAAGATCGAGCGTTCCCTC------378
Awallichi TGC---AACAGAAGCTTCTCAAGAATCTCGAGAAGATCAAGTGTTCCCTC------378
Cofficina TGCTTTAACATAAGCTTCTCGAGAATCTCGAGTAGGTCAAGTGTTCTTTC------386
SorghumI ------AAA------TGAAAAAGACTTGGT---TGTCAGTGTTAACC------349
SorghumII TTCTCTGAAACTCCTTTTTAAAATGACTTTGTACTTGTCACTGTTCTCCTCAGACTGAGG 416
Orysativa ATCGTCATATTTGGCTAACGGTAGGGAAAAGCTTTCGCCAGCGATTCCTGCCCAC----- 405
* *
Athaliana -ATCAATCGTACCTCGGATCAATGAATTGGAGATGTCACGCAAGACGGAAGATATCTTGA 437
Landsberg -ATCAATGGTACCGCGGATCAANGAATGGGAGANGTCACGCAAGACGGAAGATATCTTGA 439
Wassilesv -ATCGATCGTACCTCGGATCAATGAATTGGAGATATCCCNCA-GACAGAAGAT-CCTTG- 434
Capetraea -ATCGATNGNACCTCGGATCAATGAATTGGAGATNTCCCGCAAGACAGAAGATACCTTGA 434
Arturrita -GTCGATCGTACCTCGGATCAATGAATTGGAGATGTCCCGCAAAACGGAAGATATCTTGA 437
Cbursa-pa -GTCGATCGCACCTCGGATCAACGAATTGGAGATATCCCGCAAAACANAAGATATCTTGA 437
Awallichi -GTTGATCGCACCTTGGATCAACGAATAGGAGATATCCCGCAAAACGGAAGATATCTTAA 437
Cofficina -ATCGATTCTACCTCTGATCAANGAATCGGAGATGTCACGCAAAACGGAAGTTACCTTGA 445
SorghumI -ACCACCAGGATAGCAGGCGTGTGGACGTACAAGATGCCGAACAGTCGCTGTCGCGCGAC 408
SorghumII AACCGCCAGGATAGCAGACGTGTGGACGTACAAGCTGCCCAACAACCGCCGTCCTGCCAC 476
Orysativa -TCCACATCCACAACCAGCTCATACAT-GAAGAAATCTTGTAGGAGCACCACGTTGTTT- 462
* * * * *
Athaliana GCTTTATGCAGTCGGAGGAATCTCCTAATTTTAGCGCC----GAAATCAGATTAATAGGG 493
Landsberg GCTTTATGCAGTCGGAGGAATCTCCTAATTTTAGCGCC----GAAATCAGATTAATAGGG 495
Wassilesv GCTTT-TGCNNTNAGAGGAATCCCCNA-TTGCCNAGCC----GAAA-CAGATTA-TAGGG 486
Capetraea GCTTTATGCAGTCAGAGGAATCNCCCAATTGCAGAGCC----GAAATCAGATTAATAGGG 490
Arturrita GCTTTATGCAGTCAGGGGAATCTCCAAATTTCAGCGCC----GAAATCAGATTAGTAGGA 493
Cbursa-pa GCTTTAANCAGTCGGAGGAGTCTCCCAATTGCCNCGCCC---GAAAGCNGTTTAGNAGGT 494
Awallichi GCTTTAAGCAGTCGGAGGAATCTATCAGTTGCAGCGCC----GAAAGCAGTTTAGTAGGT 493
Cofficina GTTTCAGAAAGTCGTCGGAATCTTCCAATTTCAGCGCC----GAGACGAGGTTCGCCGGC 501
SorghumI GTGTCCCGC-GCCGGGCGGTCCGCTCGCCTTGCCTGCCG---CTAATCCAATTCCTACGC 464
SorghumII GTGTCACGC-GGCGGGCGGTCCGCTTGCCTTTGCCGCCAAATCCAATCCAATTCCTTCGC 535
Orysativa -CCACCAATAATTGCCAGGATCTCCTCATCATCACGCCACATTTGTTGTGGCACCCGGAG 521
* * ***
Athaliana GAAGCCCTA 502
Landsberg GAAGCCCTA 504
Wassilesv GCA-CCCTA 494
Capetraea GCAACCCTA 499
Arturrita GAAACCCTA 502
Cbursa-pa ACANCCCTA 503
Awallichi AAAACCCTA 502
Cofficina GAAACCCTA 510
SorghumI GCGCTCCTG 473
SorghumII GCGCTACTG 544
Orysativa GGAGCTAAG 530
1) B: Overlapping region 2: CLUSTAL W (1.82) multiple sequence alignment
Athaliana AAAAATTCAGCAACCCATTGATCAATGACCTCCATTATTGAAACTTTCGCG---ATCAAA 57
Landsberg AAAAATTCAGCAACCCATTGATCAATGACCTCCATTATTGAAACTTCCGCG---ATCAAA 57
Awallichi AAAAACTCAGCAACCCAAGTGTCAGTAACTTCCATTTCTAAAACTTTCGCG---ATCAAA 57
Cbursa-pa AAAANNTGGGCAAACCAANGGTCAATGGCTTCCNTATTTGAA-CTTCCGCG---ATCAAA 56
Arturrita AAAAATTCNGCNACCCATTTGTCGATAACTTCCATT-TCGAAACTTTTCCG---ATCAAA 56
SorghumI AATGTCCCCGCCGTCTCTCACGTAGTACGTAGTTTCGGTGTGGCTTTGTTTTAAAAGGGA 60
SorghumII GAGAATATAACCTTTTTTTTTGGTTGCCTTCATTTTGGTGTGCCTTTCTCT-----GGGA 55
Orysativa TGAATCGAAGCATCGCCAGGCTCAAACAATCGATGCCATCAGACCACCACA-----TGAG 55
* *
Athaliana GTCGCAACTTTT--TTAATTCTCTGGTCAGCGGATGCAATGTCG-CCGGCGAAGACGAAA 114
Landsberg GTCGCAACTTTT--TTAATTCTCTGGTCAGCGGATGCAATGTCG-CCGGCGAAGACGAAA 114
Awallichi GTTGTAACCTA------CAGCGGATGCAATGTCG-CCT-CGCCGGAGAAG 99
Cbursa-pa GTNGTAACCGTT--TGTTTTGTTT---CAGCGGATACAATGTCG-CCGGGGAAGACGGAA 110
Arturrita GTTACNACCTTT--TGTTTTGTTT---CCGCCCATGCANTTTTGGCCGGAGAAGACGAAN 111
SorghumI ACCAAATCTACCAATGAGTCTTTTTAAAAAGAAGAAAAATACTGGTCAGCAAAACTGAGA 120
SorghumII ACCAAATCTGTCAATGAGTCTTTTTAAAAATAAAAAAAATGCTACCTGTAAAAACTGTTA 115
Orysativa GCTATCGCTGAGG-AGGGCGTCGCCTAACATAGATGCCGTCACATCCGTCGTCTTGAAGG 114
* *
Athaliana A-----TCTCC------GATCAGTGATC-AAATTCGAACGG---TTTCAGGTATATTCT 158
Landsberg A-----TCTCC------GATCAGTGATC-AAATTCGAACGG---TTTCAGGTATATTCT 158
Awallichi A------C------GAA------AAGTTCTA------TTTCAGATATATTCT 127
Cbursa-pa AAAAACTCTCN------GATCAGTGAACTGAATACGAACAGTA-TTTCAGATATGTTAT 162
Arturrita AG---CTTTCG------GATCANC------TNTCCGGA------AAACANAC-AG 144
SorghumI TTCTCCAGC------AACGA------AAA------TGAAAAAGACTTG 150
SorghumII TTCTCCAGTTCTTTTTAAAATGATTTTTTTTTCTCTGAAACTCCTTTTTAAAATGACTTT 175
Orysativa GGGTGAAGATG------GCCCTGTCACCCCCATCCTAACGC-----TCACGCGGGCTTC 162
*
Athaliana GT--TATTGGGCCTTAACTGGGCCTAAA---AGTCAAAAGAAGATAAA-CG-GTGAGGAT 211
Landsberg GT--TATTGGGCCTTAACTGGGCCTAAA---AGTCAAAAGAAGATAAA-CG-GTGAGGAT 211
Awallichi GT--TAATGGGCCTTAAGTTGGGCCTGA---AGTCAAA-GAAGATAAA-CG-GTGCGGAT 179
Cbursa-pa GT--TAATGGGCCTTTCATTGGGCCTAA---AGTCATA-GAAGATAAA-CG-GTGCGGAT 214
Arturrita GT--TAATGGGCCTTTGGTTGGGCCTGA---AGTCAAAGTAAGATTNTTCG-GTGTGGAT 198
SorghumI GT---TGTCAGTGTTAACC------ACCACCAGGATAGCAGGCGTGTGGACGT 194
SorghumII GTACTTGTCACTGTTCTCCTCAGACTGAGG-AACCGCCAGGATAGCAGACGTGTGGACGT 234
Orysativa TTA-TGGCATGCTTAGGTGGGGCGGTGAGTTGGAGAAGAGGGGGAAGATAGGGTGGCAAC 221
* * * ***
Athaliana GCTAAAAGAGTGACAAGTGTCAA-GAGCTGAGCCTTATCCA-TAGATTCCCCAATCCTCT 269
Landsberg GCTAAAAGAGTGACAAGTGTCAA-GAGCTGAGCCTTATCCA-TAGATTCCCCAATCCTCT 269
Awallichi GTCAGAAGAGCGACAAGTGTCAT-GAGCTGAGCCTTATCCA-TAGATTCCCCAATCCTCT 237
Cbursa-pa GTCAGAAGAGTGACAAGTGTCAT-GAGNTGAGCCTTNCCCA-TAGATTCCCCAATCCTCT 272
Arturrita GNTAAACGATTGACAAGTGTCGT-GAGNTGAGCCTTATCCA-CAGATTTCCCNCTCCTCT 256
SorghumI ACAAGATGCCGAACAGTCGCTGTCGCGCGACGTGTCCCGCGCCGGGCGGTCCGCTCGCCT 254
SorghumII ACAAGCTGCCCAACAACCGCCGTCCTGCCACGTGTCACGCGGCGGGCGGTCCGCTTGCCT 294
Orysativa ACTAGGCTTTGATCGAAATTAGGGAGGTGGGAAGATATGGGATGTTGGCGCTAGATATTG 281
* * * *
1) C: The NADP-MDH gene in Brassicaceae
Cbursa-pa ATGGCCATGGCAGAGCTCTCAACCCCCAAAACGACGTCGCCTTTTCTCAACTCTTCGTCT60
Carubella ATGGCCATGGCAGAGCTCTCAACCCCCAAAACGACGTCGCCTTTTCTCAACTCTTCGTCT 60
Athaliana ATGGCCATGGCAGAGCTCTCAACCCCCAAAACGACGTCGCCTTTTCTCAACTCTTCGTCT 60
************************************************************
Cbursa-pa CGGCTTCGTCTCTCCTCAAAATTGCATCTTTCAGACCACTTTCGCCATCTTCTTCTTCCA120
Carubella CGGCTTCGTCTCTCCTCAAAATTGCATCTTTCAGACCACTTTCGCCATCTTCTTCTTCCA120
Athaliana CGGCTTCGTCTCTCTTCAAAATTGCACCTTTCAAACCACTTTCGCCATCTTCTTCTTCCA 120
************** *********** ****** **************************
Cbursa-pa CCCCTCCCCACAAC---TCCCAACTCCAAAATCTCTTGCTCCGTTTCTCAGAAGTAAGTC 177
Carubella CCCCTCCCCACAAC---TCCCAACTCTAAAATCTCATGCTCCGTTTCTCAGAAGTAAGTC 177
Athaliana CCTCTCCACACAACAACTCCCAACTCCAAAATCTCTTGCTCCGTTTCTCAAAAGTAAGTC 180
** **** ****** ********* ******** ************** *********
Cbursa-pa TCTTCAAGCTCCTAACTGTTTTCTTATCTGTATGATATTGAGCTTTATCTGATC--AGAT 235
Carubella TCTTCAAGCTCCTAACTGTTTTCTTATCTGTATGATATTGAACTTTATCTGATC--AGAT 235
Athaliana TCTTTAAGCTCCTAATCGTTTCTTCTCTCTTAAATAAATCAACTTTATCTGATCTTAGAT 240
**** ********** **** * ** * * * ************ ****
Cbursa-pa GCTTTTGTGGACTCTTATGATAAAAGTAGCCAAGCCCCTGTTGCGGTTCAAGAAAATGGA 295
Carubella GCTTTTGTGGACTCTTCTGATAAAAGTAGCCAAGCCCCTGTTGCGGTTCAAGAAAATGGA 295
Athaliana GCTTTTGTGAATTG--ATGATAAAAGTAGCCAAGCTCCTGTTGCTGTGCAAGAAAATGGA 298
********* * * ****************** ******** ** ************
Cbursa-pa TTGGCGAAGACGAGGAAAGAGTGTTATGGAGTGTTCTGCCTCACCTATGATCTTAAAGCT 355
Carubella TTGGCGAAGACGAGGAAAGAGTGTTATGGAGTGTTCTGCCTCACCTATGATCTTAAAGCT 355
Athaliana TTGGTGAAGACGAAGAAAGAGTGTTATGGAGTGTTCTGCCTCACCTATGATCTTAAAGCT 358
**** ******** **********************************************
Cbursa-pa GTATCTTACTATTCCTCTTTAACTAT-TTTTCTAAGAAAATCTTATCTT-GAGACTTTGG 413
Carubella GTATCTTACTATTCCACTTTAACTATGTTTTCTAAGAAAATCTTATCTT-GAGACTTTGG 414
Athaliana GTATCTTACTATTCCCTCTTACTATTTTTCTATAAAAGAATCTTATCTTTGAGACTTGAG 418
*************** *** * ** * *** * *********** ******* *
Cbursa-pa AATAGAGATAATCCTCTGCTTTACATGGAGCTAATAGTACTTTTATAAATGTTGTTATCT 473
Carubella AATTGAGATAATACTCTGCTTCACATGGAGATAATAGTACTTTTATAAATGTTGTCATCT 474
Athaliana AATTGAGATAATCCTCTGCTTTACATGGATATAATAGTA---TTATG------462
*** ******** ******** ******* ******** ****
Cbursa-pa AAATCTAAATTTTTTT---CTTTTCATTATGAGTAATCAATTGTGTGTGTGTGTCTGCAG 530
Carubella AAATCTAGATTTTTTTTTTCTTTTCATAATGAGTAATCAATTGTGTGTGTGT--CTGCAG 532
Athaliana ------TGTGTGTTTGC-----CAG 476
******* ** ***
Cbursa-pa GAAGAGCAGACAAAATCATGGAAGAAGTTAATCAATATTGCAGTTTCAGGTGCTGCAGGC 590
Carubella GAAGAGCAGACAAAATCTGGGAGGAAGTTAATCAATATTGCAGTTTCAGGTGCTGCAGGC 592
Athaliana GAAGAAGAGACAAGATCATGGAAGAAGTTAATTAATATTGCAGTTTCAGGTGCTGCAGGA 536
***** ****** *** *** ********* **************************
Cbursa-pa ATGATTTCAAACCATCTTCTCTTCAAAGTAAGTTAATCCTGTTTGAAAATTATTGTTTCA 650
Carubella ATGATTTCAAACCATCTTCTCTTCAAAGTAAGTTAATCCTGTTTGAAAATTATTGTTTTA 652
Athaliana ATGATTTCTAACCATCTTCTCTTCAAAGTAAGTTAATCCTTT----AAGTTACTGTTTTA 592
******** ******************************* * ** *** ***** *
Cbursa-pa TAGGATAAGGTTACCAATCATTGGTCTTATCTAATATCACTTTGGTTTTCCGAGTGTGTA 710
Carubella TAGGATAAGGTTACCAATCATTGGTCTTATCTAATATAACTTCGGTTTTCCGAGTGTGTA 712
Athaliana TAGGATAAGGTTACCAATAATTGGTCTTATTTTATGTATCTTTGGTTTTCCGGGTGTGTA 652
****************** *********** * ** * *** ********* *******
Cbursa-pa GCTTGCTTCAGGTGCAGTGTTTGGTCCAGATCAACCAATTGCGTTGAAATTGCTAGGATC 770
Carubella GCTTGCTTCAGGTGCAGTGTTTGGTCCAGATCAACCCATTGCTTTGAAACTGCTAGGATC 772
Athaliana GCTTGCTTCAGGGGAAGTATTTGGTCCAGATCAACCCATTGCATTGAAACTGCTAGGATC 712
************ * *** ***************** ***** ****** **********
Cbursa-pa AGAGAGATCAATCCAAGCTCTCGAAGGTGTTGCAATGGAGCTGGAGGATTCGTTGTTCCC 830
Carubella GGAGAGATCAATCCAAGCTCTCGAAGGTGTTGCAATGGAGCTGGAGGATTCGTTGTTCCC 832
Athaliana AGAGAGATCAATTCAAGCTCTTGAAGGTGTTGCAATGGAACTGGAGGATTCATTGTTCCC 772
*********** ******** ***************** *********** ********
Cbursa-pa CTTGTTGAGAGAAGTTGATATAGGAACAGATCCATATGAAGTTTTCCAAGACGTGGAGTG 890
Carubella CTTGTTGAGAGAGGTTGATATAGGAACAGATCCATACGAAGTTTTCCAAGACGTGGAGTG 892
Athaliana ATTGTTGAGAGAAGTTGATATAGGAACAGATCCAAATGAAGTGTTCCAAGATGTGGAGTG 832
*********** ********************* * ***** ******** ********
Cbursa-pa GGCTATTCTGATTGGAGCAAAACCTCGAGGCCCTGGAATGGAACGTGCCGACTTGTTGGA 950
Carubella GGCTATTCTGATTGGAGCAAAACCTCGAGGCCCTGGAATGGAACGTGCTGACTTGTTGGA 952
Athaliana GGCTATTCTGATTGGAGCAAAACCTCGAGGCCCTGGAATGGAACGTGCTGACTTGTTGGA 892
************************************************ ***********
Cbursa-pa CATCAATGGCCAAATCTTTGCTGAGCAGGGCAAAGCTCTTAACAAAGTTGCCTCTCCTGA 1010
Carubella CATCAATGGCCAAATCTTTGCTGAGCAGGGCAAAGCTCTTAACAAAGTTGCCTCTCCTGA 1012
Athaliana CATCAATGGCCAAATCTTTGCTGAGCAGGGCAAAGCTCTGAACAAAGCTGCCTCTCCTAA 952
*************************************** ******* ********** *
Cbursa-pa TGTTAAGGTCCTTGTTGTAGGAAACCCTTGCAATACCAAGTAAGCTACATTCCTTAATCC 1070
Carubella TGTTAAGGTCCTTGTTGTAGGAAACCCTTGCAATACCAAGTAAGCTACATTCCTTAATCC 1072
Athaliana CGTCAAGGTTCTTGTAGTGGGAAACCCTTGCAACACCAAGTAAGCTACATTCCTTAATTC 1012
** ***** ***** ** ************** ************************ *
Cbursa-pa AACCCTCTTCGTCTATGAATATCTTATGTATACTTGTA------TCATTTTCTTTTCTA 1123
Carubella AACCCTCTTCGTCTATGAATATCTTATGTATACTTGTA------TCATTTTCTTTTCTA 1125
Athaliana AACCCTCTTCATATCGTAATCAGTGACAAACATTGGAAGTATACTTTACCTCATTTTGTG 1072
********** * * *** * * * * * * * * * * **** *
Cbursa-pa TT-TTTCAGCGCCTTGATTTGTCTTAAAAATGCTCCCAACATTCCTGCAAAGAACTTCCA 1182
Carubella TT-TTTCAGCGCCTTGATTTGTCTTAAAAATGCTCCCAACATTCCTGCAAAGAACTTCCA 1184
Athaliana TTCTTTCAGTGCCTTGATTTGTCTTAAAAATGCTCCCAACATTCCTGCAAAGAACTTCCA 1132
** ****** **************************************************
Cbursa-pa TGCCCTTACGAGGTTGGACGAAAATCGTGCCAAATGCCAGGTACCACACTTTACACATAT 1242
Carubella TGCCCTTACGAGGTTGGACGAAAATCGTGCCAAATGCCAGGTACCACACTTTACACATAT 1244
Athaliana TGCCCTCACGAGGTTAGACGAAAATCGTGCCAAATGCCAGGTACTAGATTTCACACCTAT 1192
****** ******** **************************** * * ** **** ***
Cbursa-pa ATGTGATTATATGCATATTAGCATACATATCAGATGATTGAAAATT-CCATTTTGTAGCT 1301
Carubella ATGTGATTATATGCATATTAGCATACATATCAGATGATTGAAAATT-CCATTTTGTAGCT 1303
Athaliana ATGTGATTGTATGCA-ATATATTTGCATA-CATATGATTGACAATTTCCATTTTGTAGCT 1250
******** ****** ** * **** ** ******** **** *************
Cbursa-pa TGCTCTTAAAGCTGGCGTCTTCTATGACAAAGTGTCTAATATGACCATATGGGGAAATCA 1361
Carubella TGCTCTTAAAGCTGGCGTCTTCTATGACAAAGTGTCTAATATGACCATATGGGGAAATCA 1363
Athaliana TGCTCTTAAAGCCGGTGTTTTCTATGACAAAGTGTCTAATATGACCATATGGGGAAATCA 1310
************ ** ** *****************************************
Cbursa-pa CTCCACGACTCAGGTTTGCCTTATCTTGCTCTAGTGTCATCTGTTATCTCCTTATATCTT 1421
Carubella CTCCACGACTCAGGTTTGCCTTATCTTGCTCTAGTGTCATCTGTTATCTCCTTATATCTT 1423
Athaliana CTCCACGACTCAGGTTTGCCTTATCTTACTCTAGTGTCATCTATTCTCTACATTTATCTT 1370
*************************** ************** ** *** * * ******
Cbursa-pa TGGATGTTTCTCTTACTTTTTGGAGGTGAATCAGGTTCCAGACTTCTTAAATGCCAGAAT 1481
Carubella TGGATGTTTCTCTTACTTTTTGGAGGTGAATCAGGTTCCAGACTTCTTAAATGCCAGAAT 1483
Athaliana GGGATGTTTCTCTAATCTTTTAGAGGAAAATTAGGTGCCAGACTTCTTAAATGCCAGAAT 1430
************ * **** **** *** **** ***********************
Cbursa-pa TAATGGCCTTCCTGTGAAGGAGGTTATTACAGATCACAAATGGTTAGAAGAGGGATTCAC 1541
Carubella TAATGGCCTTCCTGTGAAGGAGGTTATTACAGATCACAAATGGTTAGAAGAGGGATTCAC 1543
Athaliana TAATGGCCTGCCTGTGAAGGAGGTTATTACAGATCACAAATGGTTAGAAGAGGGATTCAC 1490
********* **************************************************
Cbursa-pa TGAGAGTGTACAGAAGGTAAGACGCCATTTCCTCTGATATTGTAATGATTGATTTT-GCC 1600
Carubella TGAGAGTGTACAGAAGGTAAGACGCCATTTCCTCTGATATTGTAATGATTGATTTTTGCC 1603
Athaliana TGAGAGTGTGCAGAAGGTAAGATGGCGATTCCTCTGATAATGAAATG----ATTTCTGCA 1546
********* ************ * * *********** ** **** **** **
Cbursa-pa ATGAAATATAACGTGTGGCTGAGTAAGTTTGCGTT--GTTTTACAGAGAGGTGGGTTACT 1658
Carubella ATGAAATATAACGTGTGGCTGAGTAAGTTTGCGTTT-GTTTTACAGAGAGGTGGGTTATT 1662
Athaliana ATGAGATATAATGTTTTGCTGAGTAAGTTTGCGTTTTGTTTTACAGAGAGGTGGGTTATT 1606
**** ****** ** * ****************** ********************* *
Cbursa-pa AATTCAGAAATGGGGTCGATCTTCTGCTGCTTCTACCGCTGTCTCCATAGTTGATGCTAT 1718
Carubella AATTCAGAAATGGGGTAGATCTTCTGCTGCTTCTACTGCTGTTTCCATTGTTGATGCTAT 1722
Athaliana AATTCAGAAATGGGGTCGATCTTCTGCTGCTTCTACTGCTGTTTCCATTGTTGATGCTAT 1666
**************** ******************* ***** ***** ***********
Cbursa-pa GAAGTCTCTTGTAACTCCTACTCCTGAGGGTGATTGGTTTTCGACCGGGGTAACATCTTC 1778
Carubella AAAGTCACTTGTTACTCCTACCCCTGAGGGTGATTGGTTTTCGACTGGGGTA-TATCTTC 1781
Athaliana AAAGTCTCTTGTAACTCCTACTCCTGAGGGTGATTGGTTTTCGACTGGGGTA-CATCTTC 1725
***** ***** ******** *********************** ****** ******
Cbursa-pa TTTTACACTCATTTTGACAACAACAAGATAGATTTGGTTCAAACTTTGATAAGGTTATGC 1838
Carubella TTTTACACTCATTTGGATTACAACAAGATAGATT-GGTTCAAATTTTTATAGGGT-GTGT 1839
Athaliana TTTTACACTCATTTGGATAACAATAAGATAGATT-GGTTCAAGTTTTAACAGGGTTGTGT 1784
************** ** **** ********** ******* *** * * *** **
Cbursa-pa TAATGTAAAATTTAGGTGTACACGGATGGAAATCCTTATGGTATCGCAGAGGGCCTCGTC 1898
Carubella TAATGTAT--TTTAGGTG-ACACGGATGGAA-TCCCTATGGTAT-GAAGAGGGACTCGTC 1894
Athaliana TAATGTAAA-TTTAGGTGTACACGGATGGAAATCCTTATGGTATTGAAGAGGGCCTTGTC 1843
******* ******** ************ *** ******** * ****** ** ***
Cbursa-pa TTCAGCATGCCATGCCGGTCAAAGGTATGTTCTATTCCTTAATACTTAAAAGCTTTCTCT 1958
Carubella TTCAGCATGCCATGCCGGTCAAAGGTATGTTCTAT-CCTTGGT-CTTAAAAGCTTTCTCT 1952
Athaliana TTCAGTATGCCATGCCGGTCGAAGGTATGTTCTAT--CCTTATACTTAAAACCTTTCTCT 1901
***** ************** ************** * * * ******* ********
Cbursa-pa AGCGGTAACTCTGAAAAATTGTGTTTGTTTACTAGGGAGATGGAGATTATGAGCTTGTTA 2018
Carubella AGTGGAAAGTCTCAAA--TTTTGTTTGTTT-CTAGGGAGATGGAGATTATGAACTTGTCA 2009
Athaliana AGAGGTAAGTCTCAAAA-TTGTGTGTTGCTTACAGGGAGATGGAGATTATGAACTTGTCA 1960
** ** ** *** *** ** *** * * ******************* ***** *
Cbursa-pa AAGATGTAGAGATTGATGACTATCTCCGCAAACGAATCGCCAAGGTATTAGCCTTCTTAG 2078
Carubella AGGATGTAGAAATTGATGACTACCTTCGCAAACGAATCGCCAAGGTAT-AGCCTACTTAG 2068
Athaliana AGGATGTAGAAATTGATGACTACCTTCGCCAACGAATCGCCAAGGTAT-AGCCTTCTTAG 2019
* ******** *********** ** *** ****************** ***** *****
Cbursa-pa AGATGAGTCTTTTGCGGGTTTTGTGTCTAAAATGCTAGAAGTTAGAACTAATACATGGTA 2138
Carubella AGATTAGCCTTTTTCGGGTTTTGTATCTAGA-TGCCAGAAGTTTTA-CTGAGACATGAAA 2126
Athaliana AGATTAATCTTTTTCAGGTTTTGTATCTAAA-TACTAGAAGTTTAA-CTGAGACATGAAA 2077
**** * ***** * ******** **** * * * ******* * ** * ***** *
Cbursa-pa ATGTTACAGTCGGAAGCGGAACTTTTGGCTGAGAAGAAATGTGTTGCACACCTTACCGGA 2198
Carubella ATATTGCAGTCAGAAGCTGAACTGTTGGCTGAGAAGAGATGTGTTGCACACCTCACCGGA 2186
Athaliana ATATTGCAGTCGGAAGCGGAACTGTTGGCTGAGAAGAGATGTGTTGCACACCTCACTGGA 2137
** ** ***** ***** ***** ************* *************** ** ***
Cbursa-pa GAGGTATGACACTGTCCTAGTGTCCTGCCTATTCAAAACTAAACCTTTTTTTTAATAAAA 2258
Carubella GAGGTATG----TATCTT----TCTTGTCTATTCAAA-CAAAACCACTTTTATAG----A 2233
Athaliana GAGGTACG----TATCTT----TCTTGTCTATTCAGACAAAGCCAATTTATATAG----A 2185
****** * * ** * ** ** ******* * * * ** * ** *
Cbursa-pa AGCTAACCTTAGTTTGCTTCATGGATGTGTGTTACAGGGCATTGCCTTTTGTGATCTTGG 2318
Carubella AGCTAACCTTAGTC-GTTGCATGGATGTGTGTTTCAGGGCATCGCCTACTGTGATCTTGG 2292
Athaliana AACTAACCTTGGTT-GCTTTATGAATGTGTGTTTCAGGGCATTGCCTACTGTGATCTTGG 2244
* ******** ** * * *** ********* ******** **** ***********
Cbursa-pa TCCTGTGGATACTATGCTTCCTGGTGAAGTTTGA 2352
Carubella TCCAGTAGATACTATGCTTCCTGGGGAAGTTTGA 2326
Athaliana TCCGGTAGATACTATGCTTCCTGGGGAAGTTTGA 2278
*** ** ***************** *********
1) D: The NADP-MDH gene in A. thaliana var.Columbia and Poaceae
Svulgare ------
SorghumII ------
Orysativa ATGGATCTTCTCTGGACTCTGCTGGCGGAGTACAAGTGTAGTACGCTGCGAAGTCCAGGC 60
Athaliana ------
Svulgare ------
SorghumII ------
Orysativa AGCGGATGGTGGAAAACTAACAAGTATAAAGGCTTCGTAATCCGAATCTCTCCCTCGTGC 120
Athaliana ------
Svulgare ------
SorghumII ------
Orysativa TAATAACCTCCTCCACTCGATCACCTCCTCTTCCCCGCCAAGCTCAGCCTGCCTATCCAC 180
Athaliana ------
Svulgare ----ATGGGCCTCTCAACGGCTTACTCCCCGGTCGGATCGCACCTCGCGCCGGCGCCTCT 56
SorghumII ----ATGGGCCTTTCAACAGCTTACTCCCCGGCCGGGTCGGGCCTTGTGCCGGCCCCTCT 56
Orysativa TCCCACTCCCATGGCGGCAATCGATCTCTCCTCCCCCGCAAGATCATCGCCGGCGCCTCT 240
Athaliana ------
Svulgare CGGGCACCGTCGCTCCGCCCAGCTCCA-CCGCCCGCGCCGGGCCCTGCTCGCCACCGTCC 115
SorghumII CGCGCGC-GCCGCGCGCCGTCGCTCCGTCCAGGTCCGCCGCCCGCGCCTCGCCACCGTCC 115
Orysativa CTCCCCGCGCCGCGGCTCCCTGCACCT-CCTCCTCCGACGCCCGCGCCGACCCACCCTCC 299
Athaliana ------
Svulgare GATGCTCCGTCG---ACGCCGCCAAGTGAGTAGTAGTATA------152
SorghumII GATGCTCCGTCGTCGACGCCGCCAAGTGAGTAGTAGTACATACCGTGTTTCAGCTCACGC 175
Orysativa GCTGCTCCCTCGACGCCGCGCCAAAGTCAGTA-CACTCAAT------T 340
Athaliana ------
Svulgare CTA------CCCGGACGTGG------ACATGAATGCGTGCCATTTATCAACT-A 193
SorghumII CTAGCTATAACCCCCGATGTGTGTGTGTGGACACATGAATGAATGCGTGCCAGCAGCTTG 235
Orysativa CTT------CTTGCTCATCGATCACCAATCCTTCTCGCTCAAACCCCCCAAGCTCTTC 392
Athaliana ------
Svulgare CTAGGCTGACTAGCCC-CCTATACGTTGAT------GCAGGC--AGGTGCAGGATGG-- 241
SorghumII ATCGGCTGACTAGCGTGTACGTCTGATGAGAACCCCAGCAGGC--AGGTGCAGGACGG-- 291
Orysativa TCTTCCTAACTCTTGCCTCTGCACCCGCAG------GCAGGCTCAGGCTCAGGGCCCGC 445
Athaliana ------
Svulgare -CGTGGCGACGGCGG------AGGCGCCGGCGACGCGGAAGGACTGCTTCGGGGTCTTC 293
SorghumII -CGTGGCGACGGCGGTCGGCGGAGGCGC-GGCGTCCGGGAACGAGTGCTTCGGGGTCTTC 349
Orysativa CCGCGGCGGTCGCGG-CGGAGGAGGCGCCCACCGCGCGCAAGGAGTGCTATGGCGTCTTC 504
Athaliana ------
Svulgare TGCACCACCTACGACCTCAAGGCGGTGAGTCCCTC------CCTTCGCCTCAGGCGG 344
SorghumII TGCAACATCTACGACCTCAAGGCGGTGAGTCCGTC------AGCTCACATCACATGG 400
Orysativa TGCACCACCTACGACCTCAGGGCGGTGAGCCTCCCTCCCTCCCTCCCTCCCACCATCTGT 564
Athaliana ------
Svulgare TGGTG-----GTCCTCCCCGGTT---CCCGGTCCG-GCCTCCCCGTGTGTG-TTCGCTGA 394
SorghumII TCCTCC----GTTCCCCCAGTCA---GTCCGTCCG-GCCTCCCCGTGTTCG-T------G 445
Orysativa TTGTTGAAATGTTCCCCCCTGCTATGCTCTACCTACGCCTCCCTTTCTTTGGTTGGTACC 624
Athaliana ------
Svulgare AATGCTCCATC----GACTTT------TGCCTTTTG------CTTCAA 426
SorghumII AATGCTCCATC----GGCTT------GGCTTCTT------CTGCTG 475
Orysativa AGTACCACACCCCAAGATTTCCCCTCCAAGCCTGCCTTGTTGTTGCTGTGCAGACTGTGA 684
Athaliana ------
Svulgare ACTCAAAGTAGAATCCCTTTTCCACCTAAAG---CTAGCAAC--GTTGCTTT-TCTCCAA 480
SorghumII CCTC----TCTGGTTTGCTCTACGTTCGCCA---CTAGCTAC--GGTACT------G 517
Orysativa TGTTGCATCAGTATTCCTTTTATTTTCATCATCTCTCTCAACTTGGAGTTCCATCACTCC 744
Athaliana ------
Svulgare AAGAGAAAAAAAAAGAAAAAGCTAGCACGTCGTTGGTGTCATG-GTGTGGACCGTTGGAG 539
SorghumII GATAGCGAGCACACATATAAACT------TCGTACAGATCAC------CAAACGAAA 562
Orysativa ACGTATACGAAGAACCATGTATTTGTGTTTCGTGTCAACTGCCCGTCAATTTCATTCCAC 804
Athaliana ------
Svulgare GTGTGGTGTGGATAT----ATGC-TACGATACTGGATAGCT-TGCACTCATATCAACAGC 593
SorghumII GCGCAGGGTGGA------ATGC-CAGCGTCATTGATAGCTGTGCGCTTGCTGCACGCAC 614
Orysativa CTGAAAGATCAAGCTTTTCACGCACAGGAAAAAAAATAAATAAAAAGATCAAGCTTTTTT 864
Athaliana ------
Svulgare TGGCGTTATGCCTCTATAAATAAAAATAAATATCATACAGACCACCAA-AACCAAAGCGC 652
SorghumII C-----TCTAGCTGCGTGATCAAGCGCTTTCATTGC-CAGACAGCAAGTGAGCAAAG--- 665
Orysativa GGCGCCTATGCACTTTCATACAAAGCCAACTCTAGGATCAAACACCGGCGGAAAAAAAAA 924
Athaliana ------
Svulgare AGGGTGGAGTGCCACGCATGA----GACGCTGCACTGCACGCCACTGCTGCT--TGACTT 706
SorghumII ATGTTAACGTCTAACGCCTC------CTGAATTGCATGC----ATTTCT--TGACTT 710
Orysativa TGGACACTACACTACACCTACCACTGACCTCTTATTCTGTGATTATATTTGTAATAACTT 984
Athaliana ------
Svulgare --AATTTGGTTTCTAATTAACTTGCTGCTGTATATATCGTCATATAGTAGTACAG----- 759
SorghumII --AATTTGGTTTTTA------TGCTGCTTGTATCATCACATAATA---CAG----- 750
Orysativa GTAAAACATTACCCCTCAATCTTAATAAGATTTATTTGGTCTTCTCTTTGGCCGACCCGC 1044
Athaliana ------
Svulgare -TACTAACAATCTGTCATCCTAT------GCCATTGAATG-GATTGGGAGTTGGGA 807
SorghumII -TACTAACAACCTGTCATCCTAC------GCCGTTGAATG-GATTGGGA------791
Orysativa CTAAAAAAATTATGTGATGATATTCTCTGATAGGCCGATAGCTGTAAACGTGCTTTTCTG 1104
Athaliana ------ATGGCCATGGCAGAGC-TCTCAA 22
* * *
Svulgare CACACAG-GAAGACAAGACCAAGTCGTG------GAAGAAGCTAGTGAACAT-T 853
SorghumII CACACAG-GAAGACAAGACCAAGTCGTG------GAAGAAGCTAGTGACCAT-T 837
Orysativa CTTTCACCGAAAACAGAACCTAGGAATGTCCTTTA--CCCAAACAACTTTGTCATCAGGT 1162
Athaliana CCCCCAA-AACGACGTCGCCTTTTCTCAACTCTTCGTCTCGGCTTCGTCTCTCTTCAA-A 80
* ** * ** ** * **
Svulgare GCTGTGTCAGGCGCGGCTGGGATGATATCGAAC-CACCTGCTGTTCAAAGTAACTAAATC 912
SorghumII GCTGTGTCAGGCGCGGCTGGGATGATTTCAAAT-CACCTGCTGTTCAAAGTAAACAAATC 896
Orysativa CTTACCATAGTCCATACTGATATGGAGTACAATACAGTAAAAGTGTAAAATCGTCTTGAC 1222
Athaliana ATTGCACCTTTCAAACCACTTTCGCCATCTTCTTCTTCCACCTCTCCACACAACAACTCC 140
* * * * * * * *
Svulgare GTTTACTGACTCTACTTGTTT---CCTATCT--TGAGTTGCAGTATTGTAATGCTGAC-C 966
SorghumII TTTTACTGACTCTGCATATTT---TCTACCTACCGAGAGGCAGTATTGTATTGTTGAC-A 952
Orysativa ATGAGCCGGTTCTTCTGACCCAAGTTCCCTGAACTGGGGGCACCAGTCAATTCCTCACTA 1282
Athaliana CAACTCCAAAATCTCTTGCTCC--GTTTCTCAAAAGTAAGTCTCTTTAAGCTCCTAATCG 198
* * * * * * *
Svulgare ATTCATTTTATTAACACAAAAAAAATTCAGCTTGCCT-CTGGTGAGGTTT----TCGGAC 1021
SorghumII ATTCGGTTTATTAACCCAAAAAAAATTCAGCTCGCCT-CCGGTGAGGTTT----TTGGAC 1007
Orysativa ATTCATTTCGATGCACTACTGCCTGTTTTACTAATCTGTTTATTGTCTTTCCTGTTGAAT 1342
Athaliana TTTCTTCTCTCTTAAATAAATCAACTTTATCTGATCT--TAGATGCTTTT----GTGAAT 252
*** * * * ** ** ** *** * *
Svulgare AAGACCAACCAATAGCACTGAAGTTACTTG----GTTCAGAGAG----ATCGTTTCAAGC 1073
SorghumII AAGACCAACCAATAGCACTTAAGTTACTTG----GCTCAGAAAG----ATCGTTTCAAGC 1059
Orysativa GGAACGCAGGATGAGAAGACAAAGTCCTGGAAGAGCTTAGTGAATGTTGCTGTGTCGGGT 1402
Athaliana TGA---TGATAAAAGTAGCCAAGCTCCTGTTGCTGTGCAAGAAAATGGATTGGTGAAGAC 309
* ** * ** * ** * * * *
Svulgare TCTCGAAGGTGAATGACTGACTGCCTCTTCTTC----TTTCTGCCTTGCT-ATCTGAGAA 1128
SorghumII TCTAGAAGGTGAAAGATT------TCTTCTTT----CGGCCTTAGTACT-ATTTGAGAA 1107
Orysativa GCAGCAGGGATGATATCAAATCATCTGCTTTTCAAAGTAAGTGCCTTACTGAAATGCGTA 1462
Athaliana GAAGAAAGAGTGTTATGGAG------TGTTC------TGCCTCACC--TATGATCT 351
* * * ** * **
Svulgare GAAGAATCAATTC-ATATTTTCCACTCACTCTGTTCCAAAAGCTAAAATGCCTTATATAT 1187
SorghumII GAAGAGTCAATTC-ATATTTGCTA------1130
Orysativa GGCTGGAAAGTTCCACAGATGAAGCAAATTTCCTATAGCAATGCTGACCATTTCTTTATT 1522
Athaliana TAAAGCTGTATCTTACTATTCCCTCTTACTATTTTTC------388
* * *
Svulgare AATTTGGAACAGGGGGAGTACATACGTATAGCTTTAGTTTCAAGCTGCCCTTACAGCTTC 1247
SorghumII ------GTACATA------GTTTAAGCTCCAAACTACCCCTACA----- 1162
Orysativa GTGAACGTTTGCAGCTTGCCTCTGGTGAGGTTTTTGGACCGGACCAACCAATAGCACTTA 1582
Athaliana ------TATAAAAGAATCTTATCTTTGAGACTTGAGAATTGAGATAATCCTCTGCTTTA 441
* ** * * *
Svulgare CAGTGTTGTACTCTCTTATATCAATGGATTACTGTGACAGTGAATA-----TTTATCACT 1302
SorghumII ------ATCAATGTATTACTTTGACAGTGAATA-----TGTATCACT 1198
Orysativa AGTTGTTGGGCTCTGAAAGATCAATACAAGCACTTGAAGGTAGATTCATTCTTCTTCATT 1642
Athaliana CATGGATATAAT----AGTATTA-TGTGTGTGTTTGCCAGGAAGAA------GAGACA 488
** * * ** * *
Svulgare TCTTCCTCATGT------GCTCTCAAAAACTGCAACTGTAGGTGTTGCTAT 1347
SorghumII TGTTCCTCATGT------GCTCTCAAAAACTGCAACTGCAGGCGTACGTAT 1243
Orysativa CGGCCTTTAGATTTCAGAGGGAACATCATTTGCTAAATTTGCAACATTAGGTGTGGCTAT 1702
Athaliana AGATCATGGAAGAA------GTTAATTAATATTGCAGTTTCAGGTGCTGC--A 533
* * * ** **** *** *
Svulgare GGAACTGGAGGACTCGCTATATCCATTGCTGAGGGAAGTCAGCATTGGTATAGATCCTTA 1407
SorghumII GGAACTGGAGGACTCGCTGTATCCACTGCTGAGGGAAGTCAGCATTGGTATAGGTCCTTA 1303
Orysativa GGAATTGGAGGATTCACTGTATCCATTGCTAAGGGAAGTCAGCATTGGTATAGACCCTTA 1762
Athaliana GGAAT--GATTTCTAACCATCTTCTCT-TCAAAGTAAGTTAATCCTTTAAGTTACTGTTT 590
**** ** * * * * * * * * **** * * * **
Svulgare TGAGGTCTTTGAAGATGTAGATTGGGCCCTTCTTATTGGTGCTAAGCCCCGAGGTCCTGG 1467
SorghumII CGAGGTCTTTCAAGATGTAGATTGGGCCCTTCTTATTGGTGCTAAGCCCCGAGGTCCCGG 1363
Orysativa TGTAGTCTTCGAAGATGCAGAATGGGCTCTTCTTATTGGGGCTAAGCCCAGAGGTCCTGG 1822
Athaliana TATAGGATAAGGTTACCAATAATTGGTCTTATTTTATG----TATCTTTGGTTTTCCGGG 646
* * * * * * ** * ** ** ** * *** **
Svulgare CATGGAGCGAGCTGCGTTACTGGATATCAATGGTCAAATCTTTGCTGATCAGGT-TTCTT 1526
SorghumII CATGGAGCGAGCTGCATTACTGGATATCAATGGCCAAATCTTTGCTGACCAGGT-TTCTT 1422
Orysativa AATGGAGCGATCTGCCTTACTAGATATCAACGGTCAAATCTTTGCTGAACAGGTCTTCTT 1882
Athaliana TGTGTAGC---TTGCTTCAGGGGAAGTATTTGGTCCA------GATCAA----CCCA 690
** *** *** * * ** * ** * * ** ** *
Svulgare TTGCACTCTGTTCCTCCTTTCTTCTCAAGTACTATGTCACCAAATTGTAAGAAGTCCTCT 1586
SorghumII TC-CACTCTGTTCGTCGTTTCTTCTAAAATACTATGACATGAAATTGTAAAAAACCCTCT 1481
Orysativa TTGCTTTGCTTTCCTCATTTCTTGTGGAACACACCATTGT-AAACTGTGAGCAAACCTCA 1941
Athaliana TTGCATTGAAACTGCTA----GGATCAGAGAGATCAATTCAAGCTCTTGAAGGTGTTGCA 746
* * * * * * * * *
Svulgare CAGGAAAGG------TGCCAAGAAGCATTTTCTGAAACTTCAA------CCTCAAAT- 1631
SorghumII CAGGAAGGG------TGCCAATAGGCATTT-CTGAAACTTCAGTATTTGACCCTCAATT- 1533
Orysativa AAAAAGGGAAAGACCTGCCAGGAGGCACTA--TAAAATTTCCAT------CCTCTGACTA 1993
Athaliana ATGGAACTG------GAGGATTCATTGTTCCCATTGTTGAG------AGAAGTTG 789
* * * ** * * * *
Svulgare -TTTAAGGATTCCTAAGCATTAGAACCTGCAAATTGCCAAAACCAGAAACCAAGTACAAA 1690
SorghumII -TAAGAAGGTTCCTTAGCAT-AGAACCTGCAAACTGCTGAAACCAGAAGCCTCGTATAAA 1591
Orysativa ACTATAGGATTCATTTGCAT----ATATAGAACGTGCTAGAAAC----CTCTACTAGCAA 2045
Athaliana ATATAGGAACAGATCCAAATGAAGTGTTCCAAGATGTGGAGTGGGCTATTCTGATTGGAG 849
* ** * ** ** * * *
Svulgare TTTGAGTCAAAGCCCACCTAAATAAACGACCAG--AGTAACCTGTTATTCTTGTT----- 1743
SorghumII TTTCAGT-ACAGCGCGCATAAACCAGAAACCAAGTATAAATTTGTTCACAGTGTGCAAAA 1650
Orysativa TTTGC-TAGTAGC------AAATAAGT------TTTATCTTTATTATGC---- 2081
Athaliana CAAAACCTCGAGGCCCTGGAATGGAACGTGCTG------ACTTGTTGGACATCAAT---- 899
** ** * * * *
Svulgare ------ATTATCTGAATTTTT------TTTAAATTGTGT-CAGGGGAA 1778
SorghumII AACAACAGAGTAACTGTATTTTTGTTATGGATCTGAAATTTTGAATTGTGTTCAGGGGAA 1710
Orysativa ------TCTAAAATTCT------GATTGTAT-CAGGGGAA 2108
Athaliana ------GGCCAAATCTTT------GCTGAGC--AGGGCAA 925
* * * * ** **** **
Svulgare AGCACTTAATGCCGTGGCCTCGAAGAACGTGAAAGTCTTAGTTGTTGGAAATCCCTGTAA 1838
SorghumII AGCACTTAATGCCGTGGCCTCGCGGAACGTGAAAGTCTTAGTTGTTGGAAATCCCTGTAA 1770
Orysativa AGCACTTAACTCCGTGGCATCTCGGAATGTGAAGGTCATAGTTGTCGGGAACCCCTGTAA 2168
Athaliana AGCTCTGAACAAAGCTGCCTCTCCTAACGTCAAGGTTCTTGTAGTGGGAAACCCTTGCAA 985
*** ** ** * ** ** ** ** ** ** * ** ** ** ** ** ** **
Svulgare CACTAAGTACGGA-CATTGAT-TGTTC---ACCAAG--ATTAACGATTTTATGTCATCAC 1891
SorghumII CACTAAGTACGGA-TATTTATATGTTT---TGCTGCTTACTAACGATTT-ATGCCATC-- 1823
Orysativa CACTAAGTATGGAATTTTTTTATGTTT---TCTAAGTGTGTCATTATTTTATACTATTAT 2225
Athaliana CACCAAGTAAGCTACATTCCTTAATTCAACCCTCTTCATATCGTAATCAGTGACAAACAT 1045
*** ***** * ** * ** * ** *
Svulgare CATGTCTTAGTTGTGGCTTG-C---CCTTGATGCAGTGCGTTAATTTGCTTGAAAAATGC 1947
SorghumII ---GACTTAGTTTTGGGTTGAC---ACTTGATGCAGTGCATTGATTTGCTTGAAAAATAC 1877
Orysativa CATGTTTGAATTAAGTTTTTTTT-AAACTTTTGTAGTGCATTGATTTGCTTAAAGAATGC 2284
Athaliana TGGAAGTATACTTTACCTCATTTTGTGTTCTTTCAGTGCCTTGATTTGTCTTAAAAATGC 1105
* * * * * ***** ** ***** * ** *** *
Svulgare TCCAGACATACCAGCAAAAAATTTTCATGCACTGACGAGGTTGGATGAAAATAGAGCAAA 2007
SorghumII TCCAAACATACCAGCAAAAAATTTTCATGCACTGACGAGGTTGGACGAAAATAGAGCAAA 1937
Orysativa TCCCAACATACCAGCAAAAAACTTTCATGCATTGACGAGGTTGGATGAAAATAGAGCCAA 2344
Athaliana TCCCAACATTCCTGCAAAGAACTTCCATGCCCTCACGAGGTTAGACGAAAATCGTGCCAA 1165
*** **** ** ***** ** ** ***** * ******** ** ****** * ** **
Svulgare GTGCCAGGTGACTGACGTTGAACCTT-AT-TATGTCTCGTCCTTCCATTCCAAACAGGAA 2065
SorghumII GTGCCAGGTGACTGACGTTGAACCTTTAT-TATGTCTCGTCTTTCCATTCCCAACAGGAA 1996
Orysativa GTGCCAGGTACTTGACGTTAAATCGTAGTATTTGTGATGTATTTTTGT------GGT 2395
Athaliana ATGCCAGGTACTAGATTTCACACC----TATATGTGATTGTATGCAAT------AT 1211
******** ** * * * * * *** * *
Svulgare AACAGATTAAGAAATCACACACAATCTCC-TTTTGTAGCTAGCACTCAAAGCAGGTGTAT 2124
SorghumII AACAGATCAAGCAATCACACACAATCTCC-TTTTGTAGATAGCACTCAAAGCAGGTGTAT 2055
Orysativa TTTATTTCAAACAAATAATTGGACTTGTT-TTTTGTAGCTGGCACTAAAAGCGGGTGTAT 2454
Athaliana ATTTGCATACATA-TGATTGACAATTTCCATTTTGTAGCTTGCTCTTAAAGCCGGTGTTT 1270
* * * * * ******** * ** ** ***** ***** *
Svulgare TTTATGACAAAGTATCAAACGTGACTATTTGGGGGAACCATTCGACAACTCAGGTGAAGT 2184
SorghumII TTTATGACAAAGTATCAAACGTGACTATTTGGGGGAACCATTCGACAACTCAGGTGAAGA 2115
Orysativa TTTATGACAAAGTATCAAATATGACTATTTGGGGGAACCACTCAACAACTCAGGTGAAGA 2514
Athaliana TCTATGACAAAGTGTCTAATATGACCATATGGGGAAATCACTCCACGACTCAGGTTTGCC 1330
* *********** ** ** **** ** ***** ** ** ** ** ********
Svulgare TTTG------CATTATAAA---TTAAATGAGCAGACTATTTTG-CA 2220
SorghumII TTAGAT------TATTATAAA---CTAGATGAGCAGACTATTTTT-GG 2153
Orysativa TATGATTAGATATTACTGGCTTTCTATTGTAATACTTCCAATTATTGTACCTTTCTGTGG 2574
Athaliana TTATCT------TACTCTAGTGTCATCTATTCTCTACATTTATCTTGG 1372
* * * ** ** *
Svulgare GACACATTTCTTCGCTGAATGGTTGGCACTAACTT-CTCTGTGTAGGTTCCTGATTTCTT 2279
SorghumII GATACATTTCTTCCCTGATTG-TTGGCACTAACTT-CCCTGTGTAGGTTCCTGATTTCTT 2211
Orysativa GGTACTTTTGTTTATT--CTTATTACTGATGATTTGCTCTGAGTAGGTTCCTGATTTTTT 2632
Athaliana GATGTTTCTCTAATCTT-----TTAGAGGAAAATT------AGGTGCCAGACTTCTT 1418
* * * * * ** * ** **** ** ** ** **
Svulgare GAATGCCAAAATTGATGGGAGACCAGTGAAAGAAGTCATTAAGGATACCAAGTGGTTAGA 2339
SorghumII GAATGCCAAAATTGATGGGAGACCAGTGAAAGAAATCATTCAGGATACCAAGTGGTTAGA 2271
Orysativa GAATGCTAAAATTAACGGGAGACCAGTGAAAGAAGTCATTAAAGACACAAAGTGGTTAGA 2692
Athaliana AAATGCCAGAATTAATGGCCTGCCTGTGAAGGAGGTTATTACAGATCACAAATGGTTAGA 1478
***** * **** * ** ** ***** ** * *** ** ** ********
Svulgare AGAAGAGTTCACCATTACGGTTCAAAAGGTATG------ACAATCCATTTG 2384
SorghumII AGAAGAGTTCACCATGACAGTTCAAAAGGTGTGTGCCTCTCCCTGTTTGCAGTACGTTTG 2331
Orysativa AGATGAATTCACCAAAACAGTTCAAAAGGTAAGC------CCGGAGTGTATG 2738
Athaliana AGAGGGATTCACTGAGAGTGTGCAGAAGGTAAGA------TGGCGATTCCTCTG 1526
*** * ***** * ** ** ***** * * * **
Svulgare GAG-TGTCTGTTACTCGGATAAATAAA--CAAGGTTGTGACCATAATTCGTTTCATTCTT 2441
SorghumII GAGGTTTCTGTTACTCGAGAAATTAAGT-CAAGGTTGT-ACCATAATTCGTTTCATTCCT 2389
Orysativa C---CCTACATCAATTTA-TAACTGAAT-TGATGTTTA---CTTTGTTCGCTTCATTCCT 2790
Athaliana ATA-ATGAAATGATTTCTGCAATGAGATATAATGTTTT--GCTGAGTAAGTTTGCGTTTT 1583
* * * ** * *** * * * ** * *
Svulgare ATATCTAAACAGCGTGGAGGTGCGCTCATCCAAAAATGGGGCAGATCTTCAGCTGCATCA 2501
SorghumII ATATCTAAACAGCGTGGAGGTGTGCTCATCCAAAAATGGGGCAGATCTTCAGCCGCATCA 2449
Orysativa ATGTTTCAACAGCGTGGAGGAGTACTCATACAAAAATGGGGCAGATCTTCAGCTGCATCA 2850
Athaliana GTTTT---ACAGAGAGGTGGGTTATTAATTCAGAAATGGGGTCGATCTTCTGCTGCTTCT 1640
* * **** * ** ** * ** ** ******** ******* ** ** **
Svulgare ACCGCTGTATCAATAGCGGATGCTATTAAATCCCTGGTAACTCCTACCCCAGAAGGCGAC 2561
SorghumII ACGGCTGTTTCGATAGTGGATGCTATTAAATCCCTTGTAACTCCTACCCCAGAAGGCGAG 2509
Orysativa ACCGCCGTTTCCATCGTGGATGCTATTAGGTCCCTTGTAAATCCTACCCCAGAAGGCGAT 2910
Athaliana ACTGCTGTTTCCATTGTTGATGCTATAAAGTCTCTTGTAACTCCTACTCCTGAGGGTGAT 1700
** ** ** ** ** * ******** * ** ** **** ****** ** ** ** **
Svulgare TGGTTCTCCACAGGGGTAAGTTTTGATGCCTTTGAATTGA------TCACAGCTTTATT- 2614
SorghumII TGGTTCTCTACAGGGGTAAGTTTTGAATCCTTTGAATTGAAATTGGTCACAGCTTTGTT- 2568
Orysativa TGGTTCTCTACTGGGGTAAAATTCGAGACTTTTGG-TTGCTAATTGTTTC--TTTAATA- 2966
Athaliana TGGTTTTCGACTGGGGTACATCTT----CTTTTACACTCATTTGGATAACAATAAGATAG 1756
***** ** ** ****** * * *** * * * *
Svulgare -TCGGCATTCCTCTAATGGAAAAAAGTAATAAAAAAAACACAGGTTTATACGACTGGAAA 2673
SorghumII -TCAGCATTCCTCTAATGGAAGAA-GCAATAAAAAAACACAGGGTTTATACGACTGGAAA 2626
Orysativa -TTATTATGGCTCTCAACCAAAAG--CAATGGTAAAACAT-AGGTTTATACGACTGGAAA 3022
Athaliana ATTGGTTCAAGTTTTAAC-AGGGTTGTGTTAATGTAAATTTAGGTGTACACGGATGGAAA 1815
* * * * * * ** *** ** *** ******
Svulgare TCCTTATGGCATAGCAGAGGATATCGTGTTCAGCATGCCATGCAGATCGAAGGTATGATC 2733
SorghumII TCCTTATGGCATAGCAGAGGATATCGTGTTCAGCATGCCATGCAGATCGAAGGTACGATC 2686
Orysativa TCCTTATGGCATAGCAGAGGACATCGTGTTCAGTATGCCATGCAGGTCAAAGGTGTGTTT 3082
Athaliana TCCTTATGGTATTGAAGAGGGCCTTGTCTTCAGTATGCCATGCCGGTCGAAGGTATGTTC 1875
********* ** * ***** * ** ***** ********* * ** ***** * *
Svulgare T-ACTAATCAAATTGTCCTTATTATTTTTGTCCTAAGATAAGG----TACCACTCCAA-- 2786
SorghumII TTACTAATCAAACTGTCCTCATTATTTTCGT------TACCACTCTGA-- 2728
Orysativa TCG-TATTCACATTCTCCCTGCTTTTTCTTCCTGAGGATCAGTCGATCGCCATTGTGAAT 3141
Athaliana T----ATCC---TTATACTTAAAACCTTTCT------CTAGAGGTA-- 1908
* * * * * * * * * *
Svulgare ---TGATCGTAAAATT-----CTTCCAACAGGGTGATGGTGATTACGAACTAGCTACTGA 2838
SorghumII ---TGATCATAAAATT-----CTTCCAACAGGGTGATGGTGATTACGAACTAGCTACTGA 2780
Orysativa TTGTGATAAGCAAATTACGTGCTTCATACAGGGTGATGGTGACTACGAACTAGTTAAAGA 3201
Athaliana ----AGTCTCAAAATTGTGTGTTGCTTACAGGGAGATGGAGATTATGAACTTGTCAAGGA 1964
* ***** * * ****** ***** ** ** ***** * * **
Svulgare TGTGTCAATGGACGATTTTCTCTGGGAACGGATTAAAAAGGTAAGGGCTA--TAGGAACT 2896
SorghumII TGTGTCAATGGACGATTTTCTGTGGGAACGGATTAAAAAGGTAGGGGCTA--TAGGAACT 2838
Orysativa TGTGGCAATGGACGATTTCCTCTGGGAACGGATAAAAAAGGTTTGATCTA--TAGGCGTC 3259
Athaliana TGTAGAAATTGATGACTACCTTCGCCAACGAATCGCCAAGGTATAGCCTTCTTAGAGATT 2024
*** *** ** ** * ** * **** ** ***** ** ***
Svulgare GCCAT------CACTGATATGCTGAGAATATAAGCAGCACTAGAGATTTTACCCTAACAG 2950
SorghumII GCCAT------CACTGATATGCTGAGAATATAAGCAGCA-TAGAGATTTTACCCTAACAG 2891
Orysativa GATGTTTTGTACAATATTCTGCTAGAATTGCAAGCAGCA-TACAGGTTTT--TGAAGTTA 3316
Athaliana AATCT------TTTTCAGGTTTTGTATCTAAATACTA---GAAGTTTAACTGAGACA- 2072
* * * * * ** * * * ***
Svulgare TTGGCCCTGTAC--ATATTTTCAGAGTGAAGCTGAATTGCTTGCTGAGAAGAAATGCGTT 3008
SorghumII TTGACCCTGCA---ATATTTTCAGAGTGAAGCTGAATTGCTTGCTGAGAAGAAATGCGTT 2948
Orysativa TCAACCTTATTATAATTCTTTCAGAGTGAAGCTGAATTGCTCGCCGAGAAAAGATGCGTT 3376
Athaliana -TGAAAATA------TTGCAGTCGGAAGCGGAACTGTTGGCTGAGAAGAGATGTGTT 2122
* ** *** ***** *** ** * ** ***** * *** ***
Svulgare GCCCATCTTACTGGAGAGGTATGTCA--CAGTGACGTATTTTA-TTTA------GCT 3056
SorghumII GCCCATCTTACTGGAGAGGTATGCCA--CAGTGGCGTATTTTAGCTTAACGATGTGTGCG 3006
Orysativa GCCCATCTTACTGGAGAGGTAAGTAAAGTGGTCATGAAAAATAATTAGCTCAGTAAGACA 3436
Athaliana GCACACCTCACTGGAGAGGTACGT------ATCTTTCTTGTCT------ATT 2162
** ** ** ************ * * *
Svulgare TAAAAAGAGAGAAACCGTGCCGGAAAGGATTGGCTTAGCTTTTTCT--GTTTGTGCAAAT 3114
SorghumII TGTAAAAAGAGAAATAGTGCCGGAAAGTATTGGCTTAGCTTTTTTTTTGTTTGTGCAA-T 3065
Orysativa ACAGGAAAACCAAACTCTACTG--AACGAGTGACT-GACTGCGTCTGTTTTTGCCATGAT 3493
Athaliana CAGACAAAGCCAATTTATAT----AGAAACTAACCTTGGTTGCTTTATGAATGTG-TGTT 2217
* * ** * * * * * * * * ** *
Svulgare GCAGGGGAATGCATATTGTGATGTT---CCGGAGGATACCATGCTACCGGGAGAAGTGTA 3171
SorghumII GCAGGGGGATGCATTTTGTGATCTT---CCGGAAGATACCATGCTACCAGGAGAAAATTA 3122
Orysativa GCAGGGCAATGCATTTTGTGATCTT---CCCGGAGACACCATGCTTCCAGGAGAAATGTA 3550
Athaliana TCAGGGCATTGCCTACTGTGATCTTGGTCCGGTAGATACTATGCTTCCTGGGGAAGTTTG 2277
***** *** * ****** ** ** * ** ** ***** ** ** *** *
Svulgare G 3172
SorghumII A 3123
Orysativa G 3551
Athaliana A 2278
2) DNA sequences used for the YOH screen
F1: 515 bp
CCATGGCCATTATCGCACAGACACAAACTGTGAAAGTGAGATTTCAGAACTGGAACTATGGAGAGAGAGCGCGCCAAGCGACAGAGTAGTAAGAAAGAGGATTGGGGAATCTATGGATAAGGCTCAGCTCTTGACACTTGTCACTCTTTTAGCATCCTCACCGTTTATCTTCTTTTGACTTTTAGGCCCAGTTAAGGCCCAATAACAGAATATACCTGAAACCGTTCGAATTTGATCACTGATCGGAGATTTTCGTCTTCGCCGGCGACATTGCATCCGCTGACCAGAGAATTAAAAAAGTTGCGACTTTGATCGCGAAAGTTTCAATAATGGAGGTCATTGATCAATGGGTTGCTGAATTTTTCCTCCTTCGACAACACAATCCTAGGGCTTCCCCTATTAATCTGATTTCGGCGCTAAAATTAGGAGATTCCTCCGACTGCATAAAGCTCAAGATATCTTCCGTCTTGCGTGACATCTCCAATTCATTGATCCGAGGTACGATTGATGAGGGA
F5: 1741 bp
GAAGACAAGGCCCTCTTCAATACCATAAGGATTTCCATCCGTGTACACCTAAATTTACATTAACACAACCCTGTTAAAACTTGAACCAATCTATCTTATTGTTATCCAAATGAGTGTAAAAGAAGATGTACCCCAGTCGAAAACCAATCACCCTCAGGAGTAGGAGTTACAAGAGACTTTATAGCATCAACAATGGAAACAGCAGTAGAAGCAGCAGAAGATCGACCCCATTTCTGAATTAATAACCCACCTCTCTGTAAAACAAAACGCAAACTTACTCAGCAAAACATTATATCTCATTGCAGAAATCATTTCATTATCAGAGGAATCGCCATCTTACCTTCTGCACACTCTCAGTGAATCCCTCTTCTAACCATTTGTGATCTGTAATAACCTCCTTCACAGGCAGGCCATTAATTCTGGCATTTAAGAAGTCTGGCACCTAATTTTCCTCTAAAAGATTAGAGAAACATCCCAAGATAAATGTAGAGAATAGATGACACTAGAGTAAGATAAGGCAAACCTGAGTCGTGGAGTGATTTCCCCATATGGTCATATTAGACACTTTGTCATAGAAAACACCGGCTTTAAGAGCAAGCTACAAAATGGAAATTGTCAATCATATGTATGCAAATATATTGCATACAATCACATATAGGTGTGAAATCTAGTACCTGGCATTTGGCACGATTTTCGTCTAACCTCGTGAGGGCATGGAAGTTCTTTGCAGGAATGTTGGGAGCATTTTTAAGACAAATCAAGGCACTGAAAGAACACAAAATGAGGTAAAGTATACTTCCAATGTTTGTCACTGATTACGATATGAAGAGGGTTGAATTAAGGAATGTAGCTTACTTGGTGTTGCAAGGGTTTCCCACTACAAGAACCTTGACGTTAGGAGAGGCAGCTTTGTTCAGAGCTTTGCCCTGCTCAGCAAAGATTTGGCCATTGATGTCCAACAAGTCAGCACGTTCCATTCCAGGGCCTCGAGGTTTTGCTCCAATCAGAATAGCCCACTCCACATCTTGGAACACTTCATTTGGATCTGTTCCTATATCAACTTCTCTCAACAATGGGAACAATGAATCCTCCAGTTCCATTGCAACACCTTCAAGAGCTTGAATTGATCTCTCTGATCCTAGCAGTTTCAATGCAATGGGTTGATCTGGACCAAATACTTCCCCTGAAGCAAGCTACACACCCGGAAAACCAAAGATACATAAAATAAGACCAATTATTGGTAACCTTATCCTATAAAACAGTAACTTAAAGGATTAACTTACTTTGAAGAGAAGATGGTTAGAAATCATTCCTGCAGCACCTGAAACTGCAATATTAATTAACTTCTTCCATGATCTTGTCTCTTCTTCCTGGCAAACACACACATAATACTATTATATCCATGTAAAGCAGAGGATTATCTCAATTCTCAAGTCTCAAAGATAAGATTCTTTTATAGAAAAATAGTAAGAGGGAATAGTAAGATACAGCTTTAAGATCATAGGTGAGGCAGAACACTCCATAACACTCTTTCTTCGTCTTCACCAATCCATTTTCTTGCACAGCAACAGGAGCTTGGCTACTTTTATCATCAATTCACAAAAGCATCTAAGATCAGATAAAGTTGATTTATTTAAGAGAGAAGAAACGATTAGGAGCTTAAAGAGACTTACTTTTGAGAAACGGAGCAAGAGATTTTGGAGTTGGGAGTTGTTGTGTGGAGAGGTGGAAGAAGAAGATG
F7: 159 bp
GCATTGCTCAAGAAAAATCACATACAGATGCATGTAAATAAGAAATAAGAGTTTCATTTTCTTATTCTGAACAATAATCATAAGTAATGTGGCTGTGCTCTGTACAGCTAACAACCCGGAAGAGAATGCTTACTTGAGATGTTCAACGTCCTGCAAAAA
F9: 1578 bp
CTTTTCAGGGCATCCACCAACAAGACCATCATCCATTCTTGCTTCTTAATTCTTGTGTACAGTATATACTCTTTGTAACTTTGTTGGTGATACTTTCACATATAGGGAGCTGTTTTGAGATTGGTTTGTGGAAAAGAAAAAGCTCATAAGATTTGTGTTTGATATTAGCTATGCATTATCTAGTTTGAGTTCTGAAACTGGAATAAAGCATAGAAACGTTTCAAGTGTTTACAAATACTACTGTATATGACTTTTGGAGCATTGCTCAAGAAAAATCACATACAGATGCATGTAAATAAGAAATAAGAGTTTCATTTTCTTATTCTGAACAATAATCATAAGTAATGTGGCTGTGCTCTGTACAGCTAACAACCCGGAAGAGAATGCTTACTTGAGATGTTCAACGTCCTGCAAAAATCAAACTTCCCCAGGAAGCATAGTATCTACCGGACCAAGATCACAGTAGGCAATGCCCTGAAACACACATTCATAAAGCAACCAAGGTTAGTTTCTATATAAATTGGCTTTGTCTGAATAGACAAGAAAGATACGTACCTCTCCAGTGAGGTGTGCAACACATCTCTTCTCAGCCAACAGTTCCGCTTCCGACTGCAATATTTTCATGTCTCAGTTAAACTTCTAGTATTTAGATACAAAACCTGAAAAAGATTAATCTCTAAGAAGGCTATACCTTGGCGATTCGTTGGCGAAGGTAGTCATCAATTTCTACATCCTTGACAAGTTCATAATCTCCATCTCCCTGTAAGCAACACACAATTTTGAGACTTACCTCTAGAGAAAGGTTTTAAGTATAAGGATAGAACATACCTTCGACCGGCATGGCATACTGAAGACAAGGCCCTCTTCAATACCATAAGGATTTCCATCCGTGTACACCTAAATTTACATTAACACAACCCTGTTAAAACTTGAACCAATCTATCTTATTGTTATCCAAATGAGTGTAAAAGAAGATGTACCCCAGTCGAAAACCAATCACCCTCAGGAGTAGGAGTTACAAGAGACTTTATAGCATCAACAATGGAAACAGCAGTAGAAGCAGCAGAAGATCGACCCCATTTCTGAATTAATAACCCACCTCTCTGTAAAACAAAACGCAAACTTACTCAGCAAAACATTATATCTCATTGCAGAAATCATTTCATTATCAGAGGAATCGCCATCTTACCTTCTGCACACTCTCAGTGAATCCCTCTTCTAACCATTTGTGATCTGTAATAACCTCCTTCACAGGCAGGCCATTAATTCTGGCATTTAAGAAGTCTGGCACCTAATTTTCCTCTAAAAGATTAGAGAAACATCCCAAGATAAATGTAGAGAATAGATGACACTAGAGTAAGATAAGGCAAACCTGAGTCGTGGAGTGATTTCCCCATATGGTCATATTAGACACTTTGTCATAGAAAACACCGGCTTTAAGAGCAAGCTACAAAATGGAAATTGTCAATCATATGTATGCAAATATATTGCATACAATCACATATAGGTGTGAAATCTAGTACCTGGCATTTGGCACGATTTTCGTCTAACCTCGTGAGGGCATGGAAGTTCTTTGCA
F10: 1320 bp
GCATTGCTCAAGAAAAATCACATACAGATGCATGTAAATAAGAAATAAGAGTTTCATTTTCTTATTCTGAACAATAATCATAAGTAATGTGGCTGTGCTCTGTACAGCTAACAACCCGGAAGAGAATGCTTACTTGAGATGTTCAACGTCCTGCAAAAATCAAACTTCCCCAGGAAGCATAGTATCTACCGGACCAAGATCACAGTAGGCAATGCCCTGAAACACACATTCATAAAGCAACCAAGGTTAGTTTCTATATAAATTGGCTTTGTCTGAATAGACAAGAAAGATACGTACCTCTCCAGTGAGGTGTGCAACACATCTCTTCTCAGCCAACAGTTCCGCTTCCGACTGCAATATTTTCATGTCTCAGTTAAACTTCTAGTATTTAGATACAAAACCTGAAAAAGATTAATCTCTAAGAAGGCTATACCTTGGCGATTCGTTGGCGAAGGTAGTCATCAATTTCTACATCCTTGACAAGTTCATAATCTCCATCTCCCTGTAAGCAACACACAATTTTGAGACTTACCTCTAGAGAAAGGTTTTAAGTATAAGGATAGAACATACCTTCGACCGGCATGGCATACTGAAGACAAGGCCCTCTTCAATACCATAAGGATTTCCATCCGTGTACACCTAAATTTACATTAACACAACCCTGTTAAAACTTGAACCAATCTATCTTATTGTTATCCAAATGAGTGTAAAAGAAGATGTACCCCAGTCGAAAACCAATCACCCTCAGGAGTAGGAGTTACAAGAGACTTTATAGCATCAACAATGGAAACAGCAGTAGAAGCAGCAGAAGATCGACCCCATTTCTGAATTAATAACCCACCTCTCTGTAAAACAAAACGCAAACTTACTCAGCAAAACATTATATCTCATTGCAGAAATCATTTCATTATCAGAGGAATCGCCATCTTACCTTCTGCACACTCTCAGTGAATCCCTCTTCTAACCATTTGTGATCTGTAATAACCTCCTTCACAGGCAGGCCATTAATTCTGGCATTTAAGAAGTCTGGCACCTAATTTTCCTCTAAAAGATTAGAGAAACATCCCAAGATAAATGTAGAGAATAGATGACACTAGAGTAAGATAAGGCAAACCTGAGTCGTGGAGTGATTTCCCCATATGGTCATATTAGACACTTTGTCATAGAAAACACCGGCTTTAAGAGCAAGCTACAAAATGGAAATTGTCAATCATATGTATGCAAATATATTGCATACAATCACATATAGGTGTGAAATCTAGTACCTGGCATTTGGCACGATTTTCGTCTAACCTCGTGAGGGCATGGAAGTTCTTTGCA
3) DNA sequences obtained with the YOH
BAMP 1-1
At4g08240
At4g08240.2 68417.m01360 expressed protein 827 0.0
AGAGATCTCTATGGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGTATAGGGGCTGAGGATTAAAATCGGAGATTGAGAGAGCAATGAGAGGTGTCGGAGGTCCGTTGCTGTCAATCGGAGATCTTCTCGCCGATCTCGGTGATGAAACTGGCCACTCCCCGCAAAATCATCCAAATCCTGAAGTTTCATCAAAATCATACTCTGATGATACCATCTCTGGACCCTTGGATCTAACCCGACTCTTTCAGGAGAACTATGATAAACTTAACGATGCGTTTGCTGGTTCTGATCACTCATGGACCTCCCTAACATTAGAGCTCTGCACTTCCCTAGAGACTGCTAACAAGTTGGTCCATGCCACAACCACAAATGCTAGATTGTTGTCAGAGAAGGTTGAAGAACTCGAGAAAATAGTGAAACGAGGAGACTCAGCAGTCGCAGCTGCCANAACGGCTCACGCCACNGTTTAACCNTNAAAAGGATTACCCTCTACGTGATTCAGTTAGGGACATTTAACAAAACATTATNTTAATGCTTTACCAAGTGGTNCCCTGCTGCTTTNTTACAAGGGACCNCCANGTTTGTTTCTTACCNTCCCCGGAAAATGGGNACCCATTNTACTTTTTTAGGATTTTTTANCTTTCNAGAAGGATTNTATANNTTTTTGTTTCCTTTCNAAGNNTTTTTANNTNNTNTN
Length = 690
Score = 842 bits (425), Expect = 0.0
Identities = 498/515 (96%), Gaps = 9/515 (1%)
Strand = Plus / Plus
Query: 100 ataggggctgaggattaaaatcggagattgagagagcaatgagaggtgtcggaggtccgt 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataggggctgaggattaaaatcggagattgagagagcaatgagaggtgtcggaggtccgt 59
Query: 160 tgctgtcaatcggagatcttctcgccgatctcggtgatgaaactggccactccccgcaaa 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tgctgtcaatcggagatcttctcgccgatctcggtgatgaaactggccactccccgcaaa 119
Query: 220 atcatccaaatcctgaagtttcatcaaaatcatactctgatgataccatctctggaccct 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atcatccaaatcctgaagtttcatcaaaatcatactctgatgataccatctctggaccct 179
Query: 280 tggatctaacccgactctttcaggagaactatgataaacttaacgatgcgtttgctggtt 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tggatctaacccgactctttcaggagaactatgataaacttaacgatgcgtttgctggtt 239
Query: 340 ctgatcactcatggacctccctaacattagagctctgcacttccctagagactgctaaca 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctgatcactcatggacctccctaacattagagctctgcacttccctagagactgctaaca 299
Query: 400 agttggtccatgccacaaccacaaatgctagattgttgtcagagaaggttgaagaactcg 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agttggtccatgccacaaccacaaatgctagattgttgtcagagaaggttgaagaactcg 359
Query: 460 agaaaatagtgaaacgaggagactcagcagtcgcagctgccanaacggctcacgccacng 519
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
Sbjct: 360 agaaaatagtgaaacgaggagactcagcagtcgcagctgccagaacggttcacgccacgg 419
Query: 520 tttaaccntnaaaaggattaccctctacgtgattcagttagggacatttaacaaaacatt 579
|||||| ||||||||||||||||||||| ||||||| |||||| |||| ||||||
Sbjct: 420 -ttaacc--agaaaggattaccctctacgtga-tcagtta-ggacatataac-aaacatc 479
Query: 580 atnttaatgctttaccaagtggtnccctgctgctt 614
|| ||||||||||||||||||| ||||||||||
Sbjct: 480 ata-taatgctttaccaagtggt--cctgctgctt 514
BAMP 1-2
At5g11680
At5g11680.1 68418.m01365 expressed protein predicted proteins, A... 1025 0.0
AGATCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGCAAGAATAAACCGCGTCGCGTCTCTTTTCTGGAAAAAACGAGAAACTGTGATCTTGGCCCTCTTTTATTACCCCTATCCTCTTCTTCTTCAATCTCTCCGATCAAAATCCTTTTAAGCTCTGTAGACCCAGGTTACGCAGAGAAGAAGAACAGAACAAGGAATTATATAATCATTGGCTTGATCAATCTGAATTGCAGTTCATGGCGCTAAACCCTCAATTACTACCCAATGGGATGCCTGTTCCCTTTGTTAATGAAATGTTCGTCCTAGTCCGAGATGGTGTTGAGTTTGAAGTCGACAAGATCCCTGGAGGGCATGGAGGTCATGTTAAGGCCAAGGGGGTGATTTACTTGTCTAATATACGGATGGTCTTTGTTTCAAGCAAGCCTGTTGACAACTTTGTTGCTTTTTGACATGCCCCTGCTTTACATCCATGCCGAGAAATTTAATCAGCCAATATTTCACTGCAACAATATTGCTGGACAAGTGGAGCCTGTGGTGCCAGAAAATGAGCATAGAGCTCTATATTCNACACNCAGTTCAAGATCCTATTTAAGGAAGGTGGNTGTGGGNACATTTGTTCCTCTCTTCTTGNATTCTCATATNATCAGTGNGACAATACAACCGAANAATTGCAACCANNTNGCANAANNNNGCANCGGCANGCTNCCCCNTTGTTTGATNCCNTCTTTNANGCCNTCTNANA
Length = 1035
Score = 1120 bits (565), Expect = 0.0
Identities = 614/626 (98%), Gaps = 6/626 (0%)
Strand = Plus / Plus
Query: 97 aagaataaaccgcgtcgcgtctcttttctggaaaaaacgagaaactgtgatcttggccct 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaataaaccgcgtcgcgtctcttttctggaaaaaacgagaaactgtgatcttggccct 59
Query: 157 cttttattacccctatcctcttcttcttcaatctctccgatcaaaatccttttaagctct 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 --tttattacccctatcctcttcttcttcaatctctccgatcaaaatccttttaagctct 119
Query: 217 gtagacccaggttacgcagagaagaagaacagaacaaggaattatataatcattggcttg 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gtagacccaggttacgcagagaagaagaacagaacaaggaattatataatcattggcttg 179
Query: 277 atcaatctgaattgcagttcatggcgctaaaccctcaattactacccaatgggatgcctg 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atcaatctgaattgcagttcatggcgctaaaccctcaattactacccaatgggatgcctg 239
Query: 337 ttccctttgttaatgaaatgttcgtcctagtccgagatggtgttgagtttgaagtcgaca 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttccctttgttaatgaaatgttcgtcctagtccgagatggtgttgagtttgaagtcgaca 299
Query: 397 agatccctggagggcatggaggtcatgttaaggccaagggggtgatttacttgtctaata 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agatccctggagggcatggaggtcatgttaaggccaagggggtgatttacttgtctaata 359
Query: 457 tacggatggtctttgtttcaagcaagcctgttgacaactttgttgctttttgacatgccc 516
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 360 tacggatggtctttgtttcaagcaagcctgttgacaactttgttgc-ttttgacatgccc 419
Query: 517 ctgctttacatccatgccgagaaatttaatcagccaatatttcactgcaacaatattgct 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctgctttacatccatgccgagaaatttaatcagccaatatttcactgcaacaatattgct 479
Query: 577 ggacaagtggagcctgtggtgccagaaaatgagcatagagctctatattcnacacncag- 635
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 480 ggacaagtggagcctgtggtgccagaaaatgagcatagagctctatattcaacacacagt 539
Query: 636 ttcaagatcctatttaaggaaggtggntgtgggnacatttgttcctctcttcttgnattc 695
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | ||
Sbjct: 540 ttcaagatcctatttaaggaaggtggttgtggg-acatttgttcctctcttcttgaa-tc 599
Query: 696 tcatatnatcagtgngacaatacaac 721
|||||| ||||||| |||||||||||
Sbjct: 600 tcatatcatcagtgagacaatacaac 625
BAMP1-3
At5g03280
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical... 722 0.0
AGAGTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGCTTCTTGATCTAATCAAAGACGTTGAAATGGCAATCTCTTGTAGAAAAGGCCGAACCGGTACAGCTGCAGGTGATGTGGCTTTCCCAAAGGGGAAAGAGAATTTGGCTTCGGTTTTGAAGCGGTATAAACGTCGGTTATCGAATAAACCAGTAGGTATGAATCAGGATGGACCCGGTTCAAGAAAAAACGTGACTGCGTACGGATCATTGGGTTGAAGAAGAAGAACATTGTGAGAAATCTCATGATCAAAGTGACGTCGAGAGGGAAGCCGAAGAATCAAAACTCTCGCTTTTGATTGCTCCTCTGCTTCGTTAATTGTGTATTAAGAAAAGAAGAAAAAAAATGGATTTTTGTTGCTTCAGAATTTTTCGCTCTTTTTTTCTTAATTTGGTTGTAATGTTATGTTTAAAAANNANNGNTTNNNNNNTNCTNNNTNNTNTCTTNGNTNATNTANNNNNTNNANAGTTTANNCNTNTGGNNATTTTTTTNNNTCTGNAATCTNNAAAAACCCCTNANGTTTACTNTCNACNGGGCANANGGGNNNCNANNNNNTNTTTTTTTCTTTTTTAANCNTTGCTTNTTNCTTTCTTCTTTTTGNNNNNNTNNGTTCCCCTCANNTTNATAATNTNTGGGCCCGNNNANCCC
Length = 4746
Score = 722 bits (364), Expect = 0.0
Identities = 394/409 (96%)
Strand = Plus / Plus
Query: 97 cttcttgatctaatcaaagacgttgaaatggcaatctcttgtagaaaaggccgaaccggt 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4253 cttcttgatctaatcaaagacgttgaaatggcaatctcttgtagaaaaggccgaaccggt 4312
Query: 157 acagctgcaggtgatgtggctttcccaaaggggaaagagaatttggcttcggttttgaag 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4313 acagctgcaggtgatgtggctttcccaaaggggaaagagaatttggcttcggttttgaag 4372
Query: 217 cggtataaacgtcggttatcgaataaaccagtaggtatgaatcaggatggacccggttca 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4373 cggtataaacgtcggttatcgaataaaccagtaggtatgaatcaggatggacccggttca 4432
Query: 277 agaaaaaacgtgactgcgtacggatcattgggttgaagaagaagaacattgtgagaaatc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4433 agaaaaaacgtgactgcgtacggatcattgggttgaagaagaagaacattgtgagaaatc 4492
Query: 337 tcatgatcaaagtgacgtcgagagggaagccgaagaatcaaaactctcgcttttgattgc 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4493 tcatgatcaaagtgacgtcgagagggaagccgaagaatcaaaactctcgcttttgattgc 4552
Query: 397 tcctctgcttcgttaattgtgtattaagaaaagaagnnnnnnnntggatttttgttgctt 456
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4553 tcctctgcttcgttaattgtgtattaagaaaagaagaaaaaaaatggatttttgttgctt 4612
Query: 457 cagaatttttcgctcnnnnnnncttaatttggttgtaatgttatgttta 505
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4613 cagaatttttcgctctttttttcttaatttggttgtaatgttatgttta 4661
BAMP 5-1
At2g41230
At2g41230.1 68415.m05091 expressed protein 618 e-176
AGAGNTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAATCGGAGGCGGGGTACAACCCCTGTTTTTGGTCCCAAGGCTCGCTTCGGCGGGTCGATCCGGCGACACTCCTCCTCCTTCCTCTACTCCTCATGATTCTCCTCATTTTCTTGGCTTTTTCTCCTTCTAATGAGCCCAGCCTCGCCGTTGAACCTCTCGACCCCTGATGTCGGCGACTTGCGTTGCGAACCGTCCGTACATACATAATATGCATTACACAAATATGTCTAATTGTGTCTCTATGTGTATGTTATTCAGGAGCAGATTAAGGGCTTTTAGTTTTTAGTTTCGTGCAAGTAAGATCATGTCATGTGATAGATCTCCGAGTTTTTCTTTTCANGGATTTCGTGTAAATTTAGTTTTTAATTACTTTCTATGAGCAAAAAAAAAAAAAAAAAACT
Length = 749
Score = 618 bits (312), Expect = e-176
Identities = 321/323 (99%), Gaps = 1/323 (0%)
Strand = Plus / Plus
Query: 389 tccggcgacactcctcctccttcctctactcctcatgattctcctcattttcttggcttt 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tccggcgacactcctcctccttcctctactcctcatgattctcctcattttcttggcttt 267
Query: 449 ttctccttctaatgagcccagcctcgccgttgaacctctcgacccctgatgtcggcgact 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttctccttctaatgagcccagcctcgccgttgaacctctcgacccctgatgtcggcgact 327
Query: 509 tgcgttgcgaaccgtccgtacatacataatatgcattacacaaatatgtctaattgtgtc 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgcgttgcgaaccgtccgtacatacataatatgcattacacaaatatgtctaattgtgtc 387
Query: 569 tctatgtgtatgttattcaggagcagattaagggcttttagtttttagtttcgtgcaagt 628
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 388 tctatgtgtatgttattcaggagcagattaagggcttttag-ttttagtttcgtgcaagt 446
Query: 629 aagatcatgtcatgtgatagatctccgagtttttcttttcanggatttcgtgtaaattta 688
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 447 aagatcatgtcatgtgatagatctccgagtttttcttttcaaggatttcgtgtaaattta 506
Query: 689 gtttttaattactttctatgagc 711
|||||||||||||||||||||||
Sbjct: 507 gtttttaattactttctatgagc 529
BAMP 5-2
At2g32280
At2g32280.1 68415.m03946 expressed protein 1231 0.0
AGTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGCCACTACCCATTCTCATTCTCTCTTCAACTAATATTCTTCCCCGGCCCTCATAAAGAAGCTTCTCCTGTTCTTTATTCACATTTTCCAAAATTGTATCTTCTTAAAGTATCTCCAACAAAACTAAATCCTACTAAGTTAAGAGATTTGAAAATGACAAAGATAGGAGGTATTCTTGTTTGTCTAGTCATTGTGGGCTTAGATGTAGCTGCTGCAATCCTCGGAATCCAAGCTGAAGTCGCCCAAAATCAGGTGAAGCACATGAGGCTTTGGTTATTTGAGTGCAGAGAGCCGAGCCAGGACGCGTTCAGGCTCGGTCTAGGTGCAGCCGCGATATTGGTAATGGCTCATGTCCTACTTAACTTGGTCGGAGGCTGTCTTTGTATTTGCTCTCAAGACGAGTTTCAAAGATCTTCTTCCACTAGACAAATCTCCATGGCTTGTCTTGTCCTCACTTGGATCGTATTCGCTGTTGGATTTGGGAGTTATAGTGATTGGGGACGATGTCGAACAGTAAGTCAAGATCCTCTTGTGGATTCACACATCACCATTTTCTCTCCATTGGAGGGATTTTGTGTTTTCTTCATGCCCTCTTCTGTGTTGCTTATTACGTTTCTGCCACTGCGGCCAAAGATGAAGCTAAGTGACAAAGTGTCACGGTTAATGATGGAACAGGTAG
Length = 674
Score = 1308 bits (660), Expect = 0.0
Identities = 674/676 (99%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 96 cactacccattctcattctctcttcaactaatattcttccccggccctcataaagaagct 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactacccattctcattctctcttcaactaatattcttccccggccctcataaagaagct 59
Query: 156 tctcctgttctttattcacattttccaaaattgtatcttcttaaagtatctccaacaaaa 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tctcctgttctttattcacattttccaaaattgtatcttcttaaagtatctccaacaaaa 119
Query: 216 ctaaatcctactaagttaagagatttgaaaatgacaaagataggaggtattcttgtttgt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctaaatcctactaagttaagagatttgaaaatgacaaagataggaggtattcttgtttgt 179
Query: 276 ctagtcattgtgggcttagatgtagctgctgcaatcctcggaatccaagctgaagtcgcc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctagtcattgtgggcttagatgtagctgctgcaatcctcggaatccaagctgaagtcgcc 239
Query: 336 caaaatcaggtgaagcacatgaggctttggttatttgagtgcagagagccgagccaggac 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 caaaatcaggtgaagcacatgaggctttggttatttgagtgcagagagccgagccaggac 299
Query: 396 gcgttcaggctcggtctaggtgcagccgcgatattggtaatggctcatgtcctacttaac 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gcgttcaggctcggtctaggtgcagccgcgatattggtaatggctcatgtcctacttaac 359
Query: 456 ttggtcggaggctgtctttgtatttgctctcaagacgagtttcaaagatcttcttccact 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttggtcggaggctgtctttgtatttgctctcaagacgagtttcaaagatcttcttccact 419
Query: 516 agacaaatctccatggcttgtcttgtcctcacttggatcgtattcgctgttggatttggg 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agacaaatctccatggcttgtcttgtcctcacttggatcgtattcgctgttggatttggg 479
Query: 576 agttatagtgattggggacgatgtcgaacagtaagtcaagatcctcttgtggattcacac 635
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ag-tatagtgatt-gggacgatgtcgaacagtaagtcaagatcctcttgtggattcacac 539
Query: 636 atcaccattttctctccattggagggattttgtgttttcttcatgccctcttctgtgttg 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atcaccattttctctccattggagggattttgtgttttcttcatgccctcttctgtgttg 599
Query: 696 cttattacgtttctgccactgcggccaaagatgaagctaagtgacaaagtgtcacggtta 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cttattacgtttctgccactgcggccaaagatgaagctaagtgacaaagtgtcacggtta 659
Query: 756 atgatggaacaggtag 771
||||||||||||||||
Sbjct: 660 atgatggaacaggtag 675
BAMP 5-3
At5g41080
At5g41080.1 68418.m04993 glycerophosphoryl diesterphosphodiesterase family protein 751 0.0
AGAGTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGTGGTTCGCCGCCCGCGACGTCGCGAGAAGTCCACTAAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGGACACAAAAACGTTTTCGAAATCCCTAATCTACTCTCTCTTCTCTATATCTCTACTCT TTCGAAATCCCTAATCTACTCTCTCTTCTCTATATTGAGAAATGGCTCTTAGAACTGTGCTCGTCTCCGACGTCCCTAGCCTCCCGGATTCTGTCTACGGTTTATCCGAAGGTTTAGAGTTGAGCAAACCGACGTCGTTTAGGTTACCGGGGTTTTCGGTGATTGGACATAGAGGAATCGGTATGAATGTGTTGCAATCGTCTGATCGGAGAGCGAGAGGTGTTAAAGAAAACTCGATTCTTTCATTCAATTCCGCCGCTAAGTATCCGATTGATTTCATTGAGTTCGATGTTCAGGTGACAAAAGATGATTGCCCTGTCATTTTCCATGATGATTTCATCTACTCTGAAGAAAATGGTATTGTTAATGAGAGTAGAGTGACGGATCTGAGTCTGTCNGAGTTTCTNCCTTTATGGNCCTCANAAGGAAA
Length = 1316
Score = 755 bits (381), Expect = 0.0
Identities = 417/430 (96%), Gaps = 10/430 (2%)
Strand = Plus / Plus
Query: 345 cctaatctactctctcttctctatat------tgagaaatggctcttagaactgtgc 395
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 cctaatctactctctcttctctatatctctactcttgagaaatggctcttagaactgtgc 59
Query: 396 tcgtctccgacgtccctagcctcccggattctgtctacggtttatccgaaggtttagagt 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tcgtctccgacgtccctagcctcccggattctgtctacggtttatccgaaggtttagagt 119
Query: 456 tgagcaaaccgacgtcgtttaggttaccggggttttcggtgattggacatagaggaatcg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgagcaaaccgacgtcgtttaggttaccggggttttcggtgattggacatagaggaatcg 179
Query: 516 gtatgaatgtgttgcaatcgtctgatcggagagcgagaggtgttaaagaaaactcgattc 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gtatgaatgtgttgcaatcgtctgatcggagagcgagaggtgttaaagaaaactcgattc 239
Query: 576 tttcattcaattccgccgctaagtatccgattgatttcattgagttcgatgttcaggtga 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tttcattcaattccgccgctaagtatccgattgatttcattgagttcgatgttcaggtga 299
Query: 636 caaaagatgattgccctgtcattttccatgatgatttcatctactctgaagaaaatggta 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 caaaagatgattgccctgtcattttccatgatgatttcatctactctgaagaaaatggta 359
Query: 696 ttgttaatgagagtagagtgacggatctgagtctgtcngagtttctncctttatggncct 755
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||
Sbjct: 360 ttgttaatgagagtagagtgacggatctgagtctgtctgagtttct-cctttatggacct 419
Query: 756 canaaggaaa 765
|| |||||||
Sbjct: 420 cagaaggaaa 429
BAMP 5-4
At3g16640
At3g16640.1 68416.m02127 translationally controlled tumor family... 1110 0.0
AGTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGATCCCCTCGTCGCTGCGTCTCTCTCCCGCAACCTTCGATTTTCGTTTATTCGCATCCATCGGAGAGAGAAAACAATCAATAAGCGACCATGTTGGTGTACCAAGATCTTCTCACCGGTGATGAGCTTCTGTCTGACTCTTTCCCTTACAAGGAGATTGAGAATGGAATCCTCTGGGAAGTAGAAGGAAAGTGGGTTACTGTGGGAGCTGTAGATGTTAACATTGGTGCCAATCCATCTGCTGAAGAAGGTGGTGAGGATGAAGGTGTTGATGACTCTACTCAAAAGGTTGTTGACATTGTCGACACCTTCAGACTTCAGGAGCAACCAACTTATGACAAGAAGGGATTCATCGCTTACATTAAGAAATACATTAAGCTTTTGACACCCAAGCTCAGCGAAGAAGATCAAGCTGTCTTCAAGAAGGGTATTGAGGGAGCTACCAAGTTTTTGCTCCCCAGGCTCAGTGACTTCCAATTCTTTGTTGGGGAGGGTATGCATGATGACAGCACTTTGGTCTTGCTTACTACAAGGAGGGTTCAACTNACCCAACATTTTTTGTACTTCGCTCTGGTTTGAAGGAGGTCAAGTGCTGANAGANAACTCTCGTTGGGTTACTGGGTCGGTCGCANGACTCTCTAANTTTNGNTNCTTTANNTGGNCCGGTGNTTCGNCN
Length = 931
Score = 1162 bits (586), Expect = 0.0
Identities = 638/649 (98%), Gaps = 6/649 (0%)
Strand = Plus / Plus
Query: 95 atcccctcgtcgctgcgtctctctcccgcaaccttcgattttcgtttattcgcatccatc 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcccctcgtcgctgcgtctctctcccgcaaccttcgattttcgtttattcgcatccatc 59
Query: 155 ggagagagaaaacaatcaataagcgaccatgttggtgtaccaagatcttctcaccggtga 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ggagagagaaaacaatcaataagcgaccatgttggtgtaccaagatcttctcaccggtga 119
Query: 215 tgagcttctgtctgactctttcccttacaaggagattgagaatggaatcctctgggaagt 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgagcttctgtctgactctttcccttacaaggagattgagaatggaatcctctgggaagt 179
Query: 275 agaaggaaagtgggttactgtgggagctgtagatgttaacattggtgccaatccatctgc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agaaggaaagtgggttactgtgggagctgtagatgttaacattggtgccaatccatctgc 239
Query: 335 tgaagaaggtggtgaggatgaaggtgttgatgactctactcaaaaggttgttgacattgt 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgaagaaggtggtgaggatgaaggtgttgatgactctactcaaaaggttgttgacattgt 299
Query: 395 cgacaccttcagacttcaggagcaaccaacttatgacaagaagggattcatcgcttacat 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgacaccttcagacttcaggagcaaccaacttatgacaagaagggattcatcgcttacat 359
Query: 455 taagaaatacattaagcttttgacacccaagctcagcgaagaagatcaagctgtcttcaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 taagaaatacattaagcttttgacacccaagctcagcgaagaagatcaagctgtcttcaa 419
Query: 515 gaagggtattgagggagctaccaagtttttgctccccaggctcagtgacttccaattctt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gaagggtattgagggagctaccaagtttttgctccccaggctcagtgacttccaattctt 479
Query: 575 tgttggggagggtatgcatgatgacagcactttggtc-ttgcttactacaaggagggttc 633
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 480 tgttggggagggtatgcatgatgacagcactttggtctttgcttactacaaggagggttc 539
Query: 634 aactnacccaacattttttgtacttcgctc-tggtttgaaggaggtcaagtgctganaga 692
|||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 540 aactaacccaaca-tttttgtacttcgctcatggtttgaaggaggtcaagtgctgagaga 599
Query: 693 naa-ctctcgttgggttactg-ggtcggtcgca-ngactctctaanttt 738
|| ||||||||||||||||| ||||||||||| |||||||||| |||
Sbjct: 600 gaagctctcgttgggttactgtggtcggtcgcagcgactctctaagttt 648
BAMP 5-5
At1g13440
Arabidopsis thaliana glyceraldehyde 3-phosphate dehydrogenase
AGAGATCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGATGGCTGACAAGAAGATCAGAATCGGAATCAACGGTTTCGGAAGAATCGGTCGTTTGGTTGCTAGAGTTGTTCTTCAGAGGGATGATGTTGAGCTCGTCGCTGTTAACGATCCTTTCATCACCACCGAGTACATGACATACATGTTTAAGTATGACAGTGTTCACGGTCAGTGGAAGCACCATGAGCTTAAGGTGAAGGATGACAAAACTCTTCTCTTCGGTGAGAAGCCAGTCACTGTTTTCGGCATCAGGAACCCTGAGGACATCCCATGGGGTGAGGCTGGAGCTGACTTTGTTGTTGAGTCTACTGGTGTCTTCACTGACAAAGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCTAAAAAGGTTGTCATCTCTGCCCCAAGCAAAGATGCGCCCATGTTCGTTGTTGGTGTCAACGAGCACGAGTACAAGTCTGACCTTGACATTGTTTCCAACGCTAGTTGCACCACTAACTGCCTTGCTCCTCTTGCCAAGGTTATTAATGACAGGTTTGGCATTGTTGAGGGACTCATGACCACTGTCCACTCTATCACTGCTACTCAGAAGACAGTTGATGGTCCATCAATGAAGGACTGGAGAGGTGGAAGAGCTGCTTC
Length = 1333
Score = 1229 bits (620), Expect = 0.0
Identities = 620/620 (100%)
Strand = Plus / Plus
Query: 96 atggctgacaagaagatcagaatcggaatcaacggtttcggaagaatcggtcgtttggtt 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggctgacaagaagatcagaatcggaatcaacggtttcggaagaatcggtcgtttggtt 59
Query: 156 gctagagttgttcttcagagggatgatgttgagctcgtcgctgttaacgatcctttcatc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gctagagttgttcttcagagggatgatgttgagctcgtcgctgttaacgatcctttcatc 119
Query: 216 accaccgagtacatgacatacatgtttaagtatgacagtgttcacggtcagtggaagcac 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 accaccgagtacatgacatacatgtttaagtatgacagtgttcacggtcagtggaagcac 179
Query: 276 catgagcttaaggtgaaggatgacaaaactcttctcttcggtgagaagccagtcactgtt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 catgagcttaaggtgaaggatgacaaaactcttctcttcggtgagaagccagtcactgtt 239
Query: 336 ttcggcatcaggaaccctgaggacatcccatggggtgaggctggagctgactttgttgtt 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttcggcatcaggaaccctgaggacatcccatggggtgaggctggagctgactttgttgtt 299
Query: 396 gagtctactggtgtcttcactgacaaagacaaggctgctgctcacttgaagggtggtgct 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gagtctactggtgtcttcactgacaaagacaaggctgctgctcacttgaagggtggtgct 359
Query: 456 aaaaaggttgtcatctctgccccaagcaaagatgcgcccatgttcgttgttggtgtcaac 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aaaaaggttgtcatctctgccccaagcaaagatgcgcccatgttcgttgttggtgtcaac 419
Query: 516 gagcacgagtacaagtctgaccttgacattgtttccaacgctagttgcaccactaactgc 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gagcacgagtacaagtctgaccttgacattgtttccaacgctagttgcaccactaactgc 479
Query: 576 cttgctcctcttgccaaggttattaatgacaggtttggcattgttgagggactcatgacc 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cttgctcctcttgccaaggttattaatgacaggtttggcattgttgagggactcatgacc 539
Query: 636 actgtccactctatcactgctactcagaagacagttgatggtccatcaatgaaggactgg 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 actgtccactctatcactgctactcagaagacagttgatggtccatcaatgaaggactgg 599
Query: 696 agaggtggaagagctgcttc 715
||||||||||||||||||||
Sbjct: 600 agaggtggaagagctgcttc 619
BAMP 5-6
At2g40700
At2g40700.1 68415.m05021 DEAD/DEAH box helicase, putative (RH17)... 739 0.0
AGAGTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGCTCAAGAGTATTTTCGTGGTGAAGAAGCTTCACTTGGGTCATGTCGCCAAGAGTTTTGCTCTGAGAGAACAACCGTCTTTAGTTGGGAAATCACATCACAAGGAAACAATGAAGAGAAAGAGAGACGAACGTCAAAAAGGGCAACAAGGTAAGAAGAGAAAGAAGATGAGTGGTACTGGCAATAGAAGTACACAAAAAACTTGATCAAATCGGTTTCGCCACCATAAACCGTGGCGTAAGTTTTGTAGTTAAGGAGCTGGTTTGCTCATCGAATATTTTGAAATATCGAAAAGAAGTTGGGAGCTTTATCATGTTTGTTAACAATATTACTTGTATTGGCCAGAAAGCTAAAGATTCACAAAATTTGCTTACCAGATGTTTACTTTCTTCAAAAAAGAANAAAAANNANNAAANNNNNANNANNNNANNNNNNNNNNNNNANNNNNNNNNN
Length = 1996
Score = 547 bits (373), Expect = 0.0
Identities = 373/373 (100%)
Strand = Plus / Plus
Query: 94 gagctcaagagtattttcgtggtgaagaagcttcacttgggtcatgtcgccaagagtttt 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 gagctcaagagtattttcgtggtgaagaagcttcacttgggtcatgtcgccaagagtttt 1683
Query: 154 gctctgagagaacaaccgtctttagttgggaaatcacatcacaaggaaacaatgaagaga 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 gctctgagagaacaaccgtctttagttgggaaatcacatcacaaggaaacaatgaagaga 1743
Query: 214 aagagagacgaacgtcaaaaagggcaacaaggtaagaagagaaagaagatgagtggtact 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 aagagagacgaacgtcaaaaagggcaacaaggtaagaagagaaagaagatgagtggtact 1803
Query: 274 ggcaatagaagtacacaaaaaacttgatcaaatcggtttcgccaccataaaccgtggcgt 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 ggcaatagaagtacacaaaaaacttgatcaaatcggtttcgccaccataaaccgtggcgt 1863
Query: 334 aagttttgtagttaaggagctggtttgctcatcgaatattttgaaatatcgaaaagaagt 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 aagttttgtagttaaggagctggtttgctcatcgaatattttgaaatatcgaaaagaagt 1923
Query: 394 tgggagctttatcatgtttgttaacaatattacttgtattggccagaaagctaaagattc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 tgggagctttatcatgtttgttaacaatattacttgtattggccagaaagctaaagattc 1983
Query: 454 acaaaatttgctt 466
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Sbjct: 1984 acaaaatttgctt 1996
BAMP 5-7
At3g17390 / At3g17380
At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putati... 266 2e-70
At3g17380.1 68416.m02221 meprin and TRAF homology domain-contain... 266 2e-70
GAGTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGATGGTATTCTTGTGCTAAGAAAGTTAAATTCATAATATGTATTTCTTACTTATTTTGAGAAGAAAATCATATAAGAGAATAATATTCGACATTAGTCTCCTTTGTTTGCATTATCAATATCAAATATTTTGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCGGGGNNNNTTNAANCNGAAAANCCGNAAAACCCCCNANGNTCCCTTNNACNGGGGNNCGGGNCCCCNCCNAATTTNTTTNNTTTNANNCCCNNTTNNCCCNNTTTTNNGNAANNNANCCCCCCNAANNTTNNACNNGGGNCNNGGANCCCCGGNNNNNAAAAATTTTTTAAANGNNNAAAANTAAGNCCCCCNTTTTTTTTGGANCNAAAATTNNTNNTNNAAAANNTTTANANGGGCTTTTTTCNAAANCCTTTGGANCTNNNCCCCAANNGTTGNGNCAANNNCCCCNANAAAGGGGGGGCGGGTTGGCCCCCTNGGCCGAAAATTTTCCAAAANGNGGGAAANGGGGCCAAANCNTGGGGAAAAAACCNTNGNNNGAACCCCTCCNAAAAAANGCGGAANTTCCNTAAAGNTTTAGGGNTTTTTTAATTTN
At3g17390
Length = 1688
Score = 266 bits (134), Expect = 2e-70
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 96 atggtattcttgtgctaagaaagttaaattcataatatgtatttcttacttattttgaga 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 atggtattcttgtgctaagaaagttaaattcataatatgtatttcttacttattttgaga 1613
Query: 156 agaaaatcatataagagaataatattcgacattagtctcctttgtttgcattatcaatat 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 agaaaatcatataagagaataatattcgacattagtctcctttgtttgcattatcaatat 1673
Query: 216 caaatattttggct 229
||||||||||||||
Sbjct: 1674 caaatattttggct 1687
At3g17380
Length = 1688
Score = 266 bits (134), Expect = 2e-70
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 96 atggtattcttgtgctaagaaagttaaattcataatatgtatttcttacttattttgaga 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 atggtattcttgtgctaagaaagttaaattcataatatgtatttcttacttattttgaga 1613
Query: 156 agaaaatcatataagagaataatattcgacattagtctcctttgtttgcattatcaatat 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 agaaaatcatataagagaataatattcgacattagtctcctttgtttgcattatcaatat 1673
Query: 216 caaatattttggct 229
||||||||||||||
Sbjct: 1674 caaatattttggct 1687
BAMP 5-8
At1g07230
At1g07230.1 68414.m00769 phosphoesterase family protein low simi... 1019 0.0
AGNTCTCTATGGCTTACCCATACGATGTTCCAGATTACGCTAGCTTGGGTGGTCATATGGCCATGGAGGCCCCGGGGATCCGAATTCGGCACGAGTTTCAGCTTCATTGCTCTCTTAAAATCTGTGGTAATCTCTCTTCCATTGTTATTCTTCAAGTAAATAATGCCCTTTGCTCCTCTCTCAACACCATTTATCTTATAAACCCTAGACACTCCGCCGAATTTTTACCCTTCTCCACTGGTCATCCGCGTTTTTTTTCCGGGTCTAAGGTCACCGGAAAAATGGCTTTCCGGCGAGTGTTAACCACTGTAATCCTCTTCTGCTACTTACTAATTTCATCTCAATCCATTGAATTCAAAAACTCCCAGAAACCCCACAAGATCCAAGGACCAATCAAGACTATAGTCGTTGTAGTCATGGAGAATCGCTCCTTCGATCACATCCTCGGTTGGCTCAAATCGACCCGACCCGAAATCGACGGATTAACCGGCAAAGAGTCAAATCCCCTCAACGTCTCCGATCCAAATTCCAAAAAGATCTTCGTCTCAGACGACGCCGTCTTCGTAGACATGGNATCCGGGTCACTCATTCCAAGCGATCCGAGAAACAGATATTCGGGTCTAACGATACATCCGGCNGACCCGAAAAATGNAACGGATTTCGCACAGCAAATCAGAGAGNTATGGAAGCCTTGGANTGGGCTAAGAACGTTTATGAGCGGGTTCAAAACCCGAAGTCTTTA
Length = 2080
Score = 1019 bits (514), Expect = 0.0
Identities = 623/645 (96%), Gaps = 13/645 (2%)
Strand = Plus / Plus
Query: 96 tttcagcttcattgctctcttaaaatctgtggtaatctctcttccattgttattcttcaa 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcagcttcattgctctcttaaaatctgtggtaatctctcttccattgttattcttcaa 60
Query: 156 gtaaataatgccctttgctcctctctcaacaccatttatcttataaaccctagacactcc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtaaataatgccctttgctcctctctcaacaccatttatcttataaaccctagacactcc 120
Query: 216 gccgaatttttacccttctccactggtcatccgcgnnnnnnnnccgggtctaaggtcacc 275
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gccgaatttttacccttctccactggtcatccgcgttttttttccgggtctaaggtcacc 180
Query: 276 ggaaaaatggctttccggcgagtgttaaccactgtaatcctcttctgctacttactaatt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaaaaatggctttccggcgagtgttaaccactgtaatcctcttctgctacttactaatt 240
Query: 336 tcatctcaatccattgaattcaaaaactcccagaaaccccacaagatccaaggaccaatc 395
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