Supplemetary Table2Overview of eQTLs when comparing the 27 CD associated eSNPs across various tissues.

This study / Geneva Gencord / HapMap3 / Muther study
Thymus (n=42) / Fibroblast (n=75) / T-cells (n=75) / Lymphoid (n=75) / ^Lymphoid (n=726) / Lymphoid (n=156) / Fat (n=166) / Skin (n=160)
eSNP / Chr / eGene / IlluminaArrayID / p-value / p-value / p-value / p-value / p-value / p-value / p-value / p-value
rs12727642 / 1 / PARK7 / ILMN_1744713 / *1.4x10-3 / NID / NID / NID / - / - / - / -
rs12727642 / 1 / ERRFI1 / ILMN_1665510 / - / NID / NID / NID / 1.0x10-2 / - / 4.8x10-2 / -
rs12727642 / 1 / RERE / ILMN_2327795 / - / NID / NID / NID / NID / - / - / 2.4x10-2
rs12727642 / 1 / RERE / ILMN_2250126 / - / NID / NID / NID / NID / 1.9x10-2 / - / -
rs12727642 / 1 / RERE / ILMN_1802380 / - / NID / NID / NID / - / - / - / 2.5x10-2
rs12727642 / 1 / UTS2 / ILMN_1671818 / - / NID / NID / NID / - / 3.9x10-2 / - / -
rs296547 / 1 / GPR25 / ILMN_1761766 / 2.8x10-2 / - / - / 1.4x10-2 / - / 4.9x10-3 / - / -
rs296547 / 1 / DDX59 / ILMN_1748077 / 3.3x10-2 / - / - / - / - / - / - / -
rs296547 / 1 / DDX59 / ILMN_2357193 / - / 5.0x10-3 / - / - / NID / - / - / -
rs296547 / 1 / TNNT2 / ILMN_2341132 / - / 2.4x10-2 / - / - / NID / - / - / -
rs296547 / 1 / IGFN1 / ILMN_1702740 / - / - / - / 4.7x10-2 / NID / - / - / -
rs296547 / 1 / KIF14 / ILMN_1808071 / - / - / - / - / - / - / 3.8x10-3 / -
rs296547 / 1 / LAD1 / ILMN_1782389 / - / - / 3.9x10-2 / - / - / - / - / -
rs296547 / 1 / KIF21B / ILMN_1692060 / - / NID / NID / NID / - / 9.1x10-3 / - / -
rs2816316 / 1 / TROVE2 / ILMN_1738909 / 4.3x10-2 / - / - / - / - / 3.4x10-2 / - / -
rs2816316 / 1 / TROVE2 / ILMN_2272074 / - / - / - / - / NID / - / 2.8x10-2 / -
rs2816316 / 1 / RGS13 / ILMN_2407775 / 2.7x10-2 / - / - / - / NID / - / - / -
rs2816316 / 1 / RGS13 / ILMN_1663318 / NID / NID / NID / NID / 2.5x10-2 / NID / NID / NID
rs2816316 / 1 / RGS13 / ILMN_2407780 / - / - / - / - / NID / - / 4.5x10-2 / -
rs2816316 / 1 / RGS1 / ILMN_1656011 / - / - / - / - / - / - / 2.0x10-2 / -
rs2816316 / 1 / RGS18 / ILMN_2101278 / - / - / 2.5x10-2 / - / NID / - / - / -
rs2816316 / 1 / RGS2 / ILMN_1710974 / NID / NID / NID / NID / 1.4x10-2 / NID / NID / NID
rs2816316 / 1 / UCHL5 / ILMN_1731612 / - / - / - / - / 3.8x10-2 / 4.8x10-2 / - / -
rs6691768 / 1 / INADL / ILMN_1773312 / 4.8x10-2 / NID / NID / NID / - / - / - / -
rs6691768 / 1 / LOC645058 / ILMN_1742887 / - / NID / NID / NID / NID / - / - / 6.3x10-3
rs6691768 / 1 / TM2D1 / ILMN_1763670 / - / NID / NID / NID / NID / - / - / 2.9x10-3
rs864537 / 1 / POU2F1 / ILMN_1794333 / 1.3x10-2 / - / - / - / - / - / - / -
rs864537 / 1 / CD247 / ILMN_1676924 / - / - / - / - / NID / - / 2.0x10-4 / -
rs864537 / 1 / CD247 / ILMN_2377669 / - / - / - / - / NID / - / 2.5x10-3 / -
rs864537 / 1 / RCSD1 / ILMN_1749006 / - / - / - / - / - / 4.6x10-3 / 8.6x10-3 / -
rs196432 / 1 / C1orf63 / ILMN_1760556 / 2.1x10-3 / NID / NID / NID / NID / - / - / -
rs196432 / 1 / GRHL3 / ILMN_1782141 / 1.4x10-2 / - / - / - / - / - / - / -
rs196432 / 1 / IL28RA / ILMN_1680805 / 1.7x10-2 / - / - / - / - / - / 2.1x10-3 / -
rs196432 / 1 / IL22RA1 / ILMN_1666175 / 2.5x10-2 / - / - / - / - / - / - / -
rs196432 / 1 / SYF2 / ILMN_2394498 / - / - / 3.7x10-2 / - / NID / - / - / -
rs917997 / 2 / IL18RAP / ILMN_1721762 / 2.7x10-3 / - / - / - / 6.9x10-3 / - / - / -
rs917997 / 2 / TMEM182 / ILMN_1806801 / 3.2x10-2 / - / - / - / - / - / - / -
rs917997 / 2 / SLC9A / ILMN_1738849 / - / 4.0x10-2 / - / - / - / - / - / -
rs917997 / 2 / IL1R2 / ILMN_2251766 / - / - / - / - / NID / - / 4.3x10-3 / -
rs917997 / 2 / IL18R1 / ILMN_1781700 / - / - / - / - / - / - / 5.4x10-3 / -
rs917997 / 2 / MFSD9 / ILMN_1730028 / - / - / - / - / - / - / 2.5x10-3 / -
rs842647 / 2 / AHSA2 / ILMN_1798308 / 4.6x10-2 / - / 3.8x10-2 / - / - / - / 1.2x10-2 / -
rs842647 / 2 / KIAA1841 / ILMN_1735063 / - / 4.6x10-2 / - / - / 9.7x10-3 / - / - / -
rs842647 / 2 / PUS10 / ILMN_1810591 / - / - / - / 1.1x10-2 / NID / - / - / -
rs13003464 / 2 / C2orf74 / ILMN_1754501 / 1.1x10-3 / NID / NID / NID / 2.0 x10-4 / 5.6x10-5 / 3.0x10-3 / -
rs13003464 / 2 / AHSA2 / ILMN_1798308 / 3.1x10-2 / - / - / - / - / - / - / -
rs4675374 / 2 / RAPH1 / ILMN_1783846 / *2.5x10-3 / - / 1.1x10-2 / - / - / - / -
rs4675374 / 2 / CD28 / ILMN_1749362 / - / - / 2.9x10-2 / 3.4x10-2 / 4.02x10-2 / - / - / 9.2x10-3
rs4675374 / 2 / CTLA4 / ILMN_1763487 / - / - / 1.9x10-2 / - / 4.0 x10-4 / - / - / -
rs4675374 / 2 / CTLA4 / ILMN_2261627 / - / - / 2.6x10-2 / - / NID / - / - / -
rs4675374 / 2 / CTLA4 / ILMN_2348905 / - / - / 3.0x10-2 / - / NID / - / - / -
rs4675374 / 2 / RAPH1 / ILMN_1703843 / - / - / - / 1.2x10-2 / - / - / - / -
rs17035378 / 2 / PLEK / ILMN_1795762 / 4.2x10-2 / - / - / - / 2.9x10-2 / - / 3.2x10-3 / -
rs17035378 / 2 / PPP3R1 / ILMN_1796962 / 1.4x10-2 / NID / NID / NID / - / - / 5.0x10-3 / 4.3x10-3
rs17035378 / 2 / PNO1 / ILMN_1753607 / - / - / - / - / 1.4x10-2 / - / 3.2x10-3 / -
rs17035378 / 2 / C2orf13 / ILMN_1801047 / NID / NID / NID / NID / 2.9x10-2 / NID / NID / NID
rs17035378 / 2 / PROKR1 / ILMN_1704751 / - / - / - / - / 1.8x10-2 / - / - / -
rs17035378 / 2 / ARHGAP25 / ILMN_1763508 / NID / NID / NID / NID / 3.8x10-2 / NID / NID / NID
rs17035378 / 2 / ARHGAP25 / ILMN_1658853 / - / - / - / - / NID / 8.7x10-3 / - / -
rs17035378 / 2 / C2orf32 / ILMN_1721292 / NID / NID / NID / NID / 6.0x10-4 / NID / NID / NID
rs17035378 / 2 / FBXO48 / ILMN_1656342 / - / - / - / - / - / - / - / 2.7x10-2
rs17035378 / 2 / CNRIP1 / ILMN_2182148 / - / - / - / NID / - / 6.0x10-4 / -
rs17035378 / 2 / WDR92 / ILMN_1662065 / - / - / - / - / NID / 3.3x10-3 / - / -
rs17035378 / 2 / C1D / ILMN_1654641 / - / NID / NID / NID / NID / - / 2.2x10-2 / -
rs13098911 / 3 / LRRC2 / ILMN_1748530 / *3.7x10-2 / - / - / - / - / - / - / -
rs13098911 / 3 / CCR5 / ILMN_1653395 / - / - / - / 4.7x10-2 / NID / - / - / -
rs13098911 / 3 / TDGF1 / ILMN_1795681 / - / 2.8x10-2 / - / - / - / - / - / -
rs13098911 / 3 / ALS2CL / ILMN_1700596 / - / 2.6x10-2 / - / - / - / - / - / -
rs13098911 / 3 / LZTFL1 / ILMN_1815705 / - / 4.4x10-2 / - / - / - / - / - / -
rs13098911 / 3 / CCR1 / ILMN_1678833 / - / - / - / - / 5.2x10-3 / 1.2x10-3 / - / -
rs13098911 / 3 / XCR1 / ILMN_1764034 / - / - / - / - / - / 5.7x10-3 / - / -
rs13098911 / 3 / SLC6A20 / ILMN_1687986 / - / - / - / - / - / 4.0x10-3 / - / -
rs13098911 / 3 / FYCO1 / ILMN_1709032 / - / - / - / - / - / - / - / 5.8x10-3
rs13314993 / 3 / FBXL2 / ILMN_1688639 / 2.8x10-2 / - / - / - / - / - / - / -
rs13314993 / 3 / CCR4 / ILMN_2086143 / - / 3.6x10-2 / - / - / NID / 3.5x10-2 / - / -
rs13314993 / 3 / GLB1 / ILMN_1735155 / - / - / - / 1.8x10-2 / NID / - / - / -
rs13314993 / 3 / GLB1 / ILMN_1790862 / NID / NID / NID / NID / 2.3x10-3 / NID / NID / NID
rs13314993 / 3 / GLB1 / ILMN_2289111 / - / - / - / - / NID / - / - / 1.7x10-2
rs13314993 / 3 / GLB1 / ILMN_2397721 / - / - / - / - / NID / 2.5x10-3 / - / -
rs13314993 / 3 / DYNC1LI1 / ILMN_1703844 / - / 3.4x10-2 / - / - / - / - / - / -
rs13314993 / 3 / CMTM6 / ILMN_1696494 / - / 4.4x10-2 / - / - / - / - / - / -
rs13314993 / 3 / TRIM71 / ILMN_1714774 / - / - / - / - / 1.1x10-2 / - / - / -
rs13314993 / 3 / TRIM71 / ILMN_2225061 / - / - / - / - / NID / 2.2x10-3 / - / 3.4x10-3
rs13314993 / 3 / CNOT10 / ILMN_2078334 / - / - / - / - / NID / - / 1.2x10-2 / -
rs13314993 / 3 / CRTAP / ILMN_1665235 / - / - / - / - / - / 3.1x10-2 / - / -
rs13314993 / 3 / TMPPE / ILMN_1774211 / - / - / - / - / - / 3.2x10-2 / - / -
rs11712165 / 3 / ILMN_191538 / 4.0x10-2 / NID / NID / NID / NID / NID / NID / NID
rs11712165 / 3 / C3orf15 / ILMN_1676749 / - / - / - / 2.5x10-2 / - / 7.1x10-3 / - / -
rs11712165 / 3 / C3orf1 / ILMN_1709666 / NID / NID / NID / NID / 4.3x10-2 / NID / NID / NID
rs11712165 / 3 / C3orf1 / ILMN_2193175 / - / - / - / - / - / - / - / 3.7x10-2
rs11712165 / 3 / CDGAP / ILMN_1752914 / - / - / - / - / 3.3x10-3 / 1.4x10-2 / - / -
rs11712165 / 3 / C3orf30 / ILMN_2041463 / - / - / - / - / - / - / 7.0x10-4 / -
rs11712165 / 3 / NR1I2 / ILMN_1806561 / - / 3.6x10-2 / - / - / - / - / - / -
rs11712165 / 3 / UPK1B / ILMN_1812679 / - / - / - / - / - / 4.2x10-3 / - / -
rs11712165 / 3 / B4GALT4 / ILMN_1661500 / - / - / - / - / - / 1.2x10-2 / - / -
rs11712165 / 3 / IGSF11 / ILMN_1753502 / - / NID / NID / NID / - / - / 6.5x10-3 / -
rs6441961 / 3 / TSP50 / ILMN_1775615 / 3.5x10-2 / NID / NID / NID / - / - / - / -
rs6441961 / 3 / CCR1 / ILMN_1678833 / 1.7x10-2 / - / 9.7x10-3 / - / 1.1x10-3 / 1.0x10-2 / - / -
rs6441961 / 3 / CCR2 / ILMN_1774761 / - / NID / NID / NID / NID / - / 3.7x10-2 / -
rs6441961 / 3 / CCR9 / ILMN_2337386 / - / - / - / 2.7x10-2 / NID / - / - / -
rs6441961 / 3 / CCR9 / ILMN_1664316 / - / - / - / - / - / - / 2.7x10-2 / -
rs6441961 / 3 / CCR3 / ILMN_1656684 / - / 1.9x10-2 / - / - / 7.6x10-3 / - / - / 3.6x10-2
rs6441961 / 3 / CCR3 / ILMN_1722500 / NID / NID / NID / NID / 3.7x10-2 / NID / NID / NID
rs6441961 / 3 / CCR5 / ILMN_1653395 / - / - / - / 1.3x10-2 / NID / - / - / -
rs6441961 / 3 / CCR5 / ILMN_2145033 / - / - / - / - / NID / - / - / 2.9x10-2
rs6441961 / 3 / XCR1 / ILMN_1764034 / - / - / - / - / - / - / 1.6x10-2 / -
rs6441961 / 3 / ALS2CL / ILMN_1702322 / - / - / - / - / 4.0x10-2 / - / - / 2.2x10-2
rs6441961 / 3 / LTF / ILMN_1677920 / - / - / - / - / 8.7x10-3 / - / 1.4x10-2 / -
rs6441961 / 3 / FYCO1 / ILMN_1709032 / - / - / - / - / 3.0x10-2 / - / - / -
rs6441961 / 3 / SLC6A20 / ILMN_1687986 / - / - / - / - / 4.5x10-2 / - / - / -
rs6441961 / 3 / SACM1L / ILMN_1765019 / - / - / - / - / - / - / - / 9.8x10-3
rs6441961 / 3 / TDGF1 / ILMN_2132379 / - / - / - / - / NID / 4.5x10-2 / - / -
rs6441961 / 3 / TMIE / ILMN_1726745 / - / - / - / - / - / - / 1.5x10-2 / -
rs6441961 / 3 / LZTFL1 / ILMN_1815705 / - / - / - / - / - / 2.9x10-2 / - / 2.8x10-2
rs6441961 / 3 / LLRC2 / ILMN_1755047 / - / - / - / - / - / 1.8x10-2 / - / -
rs13151961 / 4 / NUDT6 / ILMN_2366972 / 4.1x10-2 / - / - / - / NID / 6.2x10-3 / - / -
rs13151961 / 4 / NUDT6 / ILMN_1665192 / - / - / - / - / NID / 2.8x10-2 / - / -
rs13151961 / 4 / NUDT6 / ILMN_1780659 / - / - / - / - / - / 2.7x10-2 / - / -
rs13151961 / 4 / NUDT6 / ILMN_1694311 / - / - / - / - / - / 5.6x10-3
rs13151961 / 4 / BBS7 / ILMN_1775012 / - / - / - / - / 2.0x10-2 / 2.9x10-2 / - / -
rs13151961 / 4 / BBS7 / ILMN_1703111 / - / NID / NID / NID / 1.3x10-2 / - / - / -
rs13151961 / 4 / ANXA5 / ILMN_1741003 / - / - / - / - / - / - / 4.2x10-2 / -
rs13151961 / 4 / KIAA1109 / ILMN_1710007 / NID / NID / NID / NID / 4.0x10-4 / NID / NID / NID
rs1738074 / 6 / ILMN_1902604 / 3.2x10-3 / NID / NID / NID / NID / NID / NID / NID
rs1738074 / 6 / TAGAP / ILMN_1739985 / - / NID / NID / NID / 6.0x10-4 / - / 5.0x10-2
rs1738074 / 6 / TAGAP / ILMN_1809925 / - / NID / NID / NID / 2.4x10-3 / - / - / -
rs1738074 / 6 / RSPH3 / ILMN_1788223 / - / NID / NID / NID / 2.2x10-2 / - / - / -
rs1738074 / 6 / LOC202459 / ILMN_1764650 / - / NID / NID / NID / 4.8x10-2 / - / - / -
rs1738074 / 6 / DYNLT1 / ILMN_1678766 / - / NID / NID / NID / 2.4x10-2 / - / - / -
rs1738074 / 6 / FNDC1 / ILMN_2163873 / - / NID / NID / NID / NID / - / - / 1.5x10-2
rs1738074 / 6 / FNDC1 / ILMN_1734653 / - / NID / NID / NID / - / - / - / 4.4x10-2
rs1738074 / 6 / VIL2 / ILMN_1795937 / - / NID / NID / NID / - / - / 1.6x10-3 / -
rs6974491 / 7 / GPR141 / ILMN_2092333 / - / 3.3x10-2 / 4.7x10-2 / - / NID / - / - / -
rs6974491 / 7 / GPR141 / ILMN_1656818 / - / - / 7.9x10-3 / - / - / - / - / -
rs6974491 / 7 / ELMO1 / ILMN_1663627 / - / - / - / 3.5x10-2 / 3.02x10-2 / - / - / -
rs6974491 / 7 / ELMO1 / ILMN_1784320 / 1.3x10-2 / - / - / - / - / 4.6x10-3 / - / -
rs1250552 / 10 / PPIF / ILMN_1809607 / 4.7x10-2 / - / - / - / - / 5.3x10-3 / - / -
rs1250552 / 10 / ZMIZ1 / ILMN_1771627 / - / - / 2.3x10-3 / - / - / - / - / -
rs1250552 / 10 / SFTPA1 / ILMN_1678533 / - / - / - / - / 1.6x10-2 / - / - / -
rs1250552 / 10 / ZCCHC24 / ILMN_1754660 / - / - / - / - / - / - / - / 4.1x10-2
rs653178 / 12 / ERP29 / ILMN_2323048 / 4.6x10-2 / NID / NID / NID / NID / - / - / -
rs653178 / 12 / ERP29 / ILMN_2251148 / NID / NID / NID / NID / NID / 3.3x10-2 / - / -
rs653178 / 12 / FAM109A / ILMN_1743316 / 1.2x10-2 / NID / NID / NID / - / - / - / -
rs653178 / 12 / ACAD10 / ILMN_1687303 / - / NID / NID / NID / 7.5x10-3 / - / - / -
rs653178 / 12 / ALDH2 / ILMN_1793859 / - / NID / NID / NID / 4.7x10-2 / - / - / 1.7x10-2
rs653178 / 12 / C12orf51 / ILMN_1654428 / NID / NID / NID / NID / 1.1x10-2 / NID / NID / NID
rs653178 / 12 / SH2B3 / ILMN_1752046 / NID / NID / NID / NID / NID / - / 2.7x10-2 / -
rs653178 / 12 / BRAP / ILMN_1772034 / NID / NID / NID / NID / NID / - / - / 3.9x10-2
rs653178 / 12 / ATNX2 / ILMN_1743829 / NID / NID / NID / NID / - / - / - / 1.5x10-2
rs3184504 / 12 / ERP29 / ILMN_2251148 / NID / NID / NID / NID / NID / 3.3x10-2 / - / -
rs3184504 / 12 / FAM109A / ILMN_1743316 / 1.2x10-2 / NID / NID / NID / - / - / -
rs3184504 / 12 / ACAD10 / ILMN_1687303 / - / NID / NID / NID / 1.2x10-2 / - / - / -
rs3184504 / 12 / ALDH2 / ILMN_1793859 / - / NID / NID / NID / 4.7x10-2 / - / - / 1.7x10-2
rs3184504 / 12 / C12orf51 / ILMN_1654428 / NID / NID / NID / NID / 1.1x10-2 / NID / NID / NID
rs3184504 / 12 / SH2B3 / ILMN_1752046 / NID / NID / NID / NID / - / - / 2.7x10-2 / -
rs3184504 / 12 / BRAP / ILMN_1772034 / NID / NID / NID / NID / NID / - / - / 4.0x10-2
rs3184504 / 12 / ATNX2 / ILMN_1743829 / NID / NID / NID / NID / - / - / - / 1.5x10-2
rs4899260 / 14 / ZEP36L1 / ILMN_1675448 / 1.2x10-2 / - / - / - / NID / NID / NID / NID
rs4899260 / 14 / ZEP36L1 / ILMN_1868007 / - / NID / NID / NID / 1.8x10-2 / NID / NID / NID
rs4899260 / 14 / RAD51L1 / ILMN_1802392 / - / - / 2.4x10-3 / - / 4.3x10-2 / - / - / -
rs4899260 / 14 / RAD51L1 / ILMN_1801262 / NID / NID / NID / NID / NID / 2.7x10-2 / - / -
rs4899260 / 14 / GALNTL1 / ILMN_2077952 / - / - / - / 3.6x10-2 / NID / - / - / -
rs4899260 / 14 / EXD2 / ILMN_1771689 / - / - / - / NID / 1.6x10-2 / 1.6x10-2 / -
rs1893217 / 18 / SLMO1 / ILMN_2232157 / *8.4x10-3 / - / - / - / NID / - / - / 9.3x10-3
rs1893217 / 18 / CEP76 / ILMN_2154223 / - / - / - / 4.5 x10-2 / NID / - / - / -
rs4819388 / 21 / PDXK / ILMN_1672504 / 3.9x10-2 / - / - / - / - / - / 3.1x10-2 / -
rs4819388 / 21 / C21orf33 / ILMN_1737588 / - / - / 4.7x10-2 / - / 4.9x10-2 / - / - / -
rs4819388 / 21 / C21orf33 / ILMN_1682812 / - / - / 3.1x10-2 / - / - / - / - / 2.1x10-2
rs4819388 / 21 / AIRE / ILMN_1670282 / - / - / - / - / 5.8x10-3 / - / - / -
rs4819388 / 21 / AIRE / ILMN_1791236 / - / - / - / - / 2.0x10-3 / - / 4.5x10-3 / -
rs4819388 / 21 / KRTAP10-2 / ILMN_1797201 / NID / - / - / - / 1.3x10-2 / - / - / -
rs4819388 / 21 / KRTAP10-10 / ILMN_1776412 / - / - / - / 4.5x10-2 / - / - / - / -
rs4819388 / 21 / KRTAP10-10 / ILMN_2135306 / NID / - / - / - / NID / - / 3.3x10-3 / 2.3x10-3
rs4819388 / 21 / KRTAP10-10 / ILMN_1714028 / NID / - / - / - / - / 1.3x10-2 / - / -
rs4819388 / 21 / KRTAP10-11 / ILMN_1710929 / - / - / - / - / 3.2x10-3 / - / - / -
rs4819388 / 21 / KRTAP10-12 / ILMN_1754009 / - / - / - / - / 1.8x10-2 / - / 1.4x10-2 / -
rs4819388 / 21 / KRTAP12-1 / ILMN_1778061 / NID / NID / NID / NID / 2.1x10-2 / NID / NID / NID
rs4819388 / 21 / KRTAP12-1 / ILMN_2173797 / NID / - / - / - / NID / - / - / 2.8x10-2
rs4819388 / 21 / KRTAP12-4 / ILMN_1780422 / - / - / 3.2x10-2 / - / 1.1x10-2 / - / - / -
rs4819388 / 21 / RRP1 / ILMN_1792960 / - / - / - / - / 3.9x10-2 / - / - / -
rs4819388 / 21 / C21orf70 / ILMN_1655605 / - / NID / NID / NID / 3.0x10-2 / NID / NID / NID
rs4819388 / 21 / C21orf29 / ILMN_1699901 / NID / 1.7x10-3 / - / - / 2.7x10-2 / - / - / -
rs4819388 / 21 / C21orf90 / ILMN_1666773 / - / NID / NID / NID / 9.0x10-4 / - / - / -
rs4819388 / 21 / DNMT3L / ILMN_2406634 / - / 2.6x10-2 / - / - / NID / 9.8x10-3 / - / -
rs4819388 / 21 / ICOSLG / ILMN_1675671 / NID / - / - / - / - / - / 1.0x10-2 / 1.6x10-3
rs2298428 / 22 / UBE2L3 / ILMN_1677877 / 9.0x10-4 / NID / NID / NID / 1.3x10-3 / - / - / -
rs2298428 / 22 / PPIL2 / ILMN_1675273 / - / - / - / - / - / - / 3.7x10-3 / -
rs2298428 / 22 / PPIL2 / ILMN_1802872 / - / - / - / 3.6x10-2 / - / - / - / -
rs2074404 / 17 / NSF / ILMN_2330845 / - / NID / NID / NID / NID / 7.2x10-3 / - / -
rs2074404 / 17 / NSF / ILMN_2251784 / 3.0x10-2 / NID / NID / NID / NID / 1.1x10-3 / - / -
rs2074404 / 17 / NSF / ILMN_1680353 / 2.4x10-2 / NID / NID / NID / NID / 2.0x10-4 / - / -
rs2074404 / 17 / ARL17P1 / ILMN_1698680 / - / NID / NID / NID / NID / - / - / 1.0x10-3
rs2074404 / 17 / MYL4 / ILMN_1684255 / - / NID / NID / NID / 2.0x10-2 / - / 7.6x10-3 / -
rs3748816 / 1 / PANK4 / ILMN_1743910 / 2.3x10-2 / NID / NID / NID / - / - / - / -
rs3748816 / 1 / HES5 / ILMN_1794742 / 1.7x10-3 / NID / NID / NID / 1.0x10-3 / - / - / -
rs3748816 / 1 / TNFRSF14 / ILMN_1697409 / - / - / - / - / 6.0x10-4 / - / - / -
rs3748816 / 1 / PRKCZ / ILMN_1697269 / NID / NID / NID / NID / 9.7x10-5 / - / - / NID
rs3748816 / 1 / PRKCZ / ILMN_1662155 / - / NID / NID / NID / - / - / 3.6x10-3 / -
rs3748816 / 1 / PRDM16 / ILMN_2343264 / - / NID / NID / NID / NID / - / - / 7.2x10-3

Abbreviations: NID, not in data set (i.e. the probe (or SNP) was not present in the dataset)t; -, not statistically significant. A p-value < 0.05 was set as the significance threshold. *T-test p-value (performed when only two genotype groups were available). ^This study included lymphoblastoid cell lines from several populations, each analyzed separately: CEU (n=109), CHB (n=80), GIH (n=82), JPT (n=82), LWK (n=82), MEX (n=45), MKK (n=138) and YRI (n=108). The most significant result is presented in the table if more populations in a study showed a positive signal. rs653178, rs3184504, rs1738074 and rs12727642 were not included in the Geneva Gencord study.