Table S2. Eighty nine rice interaction genepairs that were found using rice interaction viewer.

Protein 1a / Protein 2b
Rice ortholog / Subcellular Localization / Wheat / Rice ortholog / Wheat / Subcellular Localization
LOC_Os04g16771 / N/A / N/A / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os02g12570 / Nucleus / Ta.10184.1.S1_a_at / LOC_Os03g63590 / Ta.10722.1.S1_at / Endoplasmic reticulum
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os10g28640 / Ta.13687.1.S1_at / Chloroplast
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os11g01420 / Ta.24826.1.S1_at / Cellmembrane
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os07g08840 / Ta.26879.1.A1_at / Cytoplasm/Chloroplast
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os07g12110 / Ta.2821.1.S1_at / Vacuole
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os09g36710 / Ta.28267.1.S1_a_at / Nucleus/Cytoplasm
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os07g31370 / Ta.28749.1.S1_a_at / Nucleus/Golgiapparatus
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os06g05880 / Ta.5057.3.A1_at / Cytoplasm/Chloroplast
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os09g25310 / Ta.766.1.S1_at / Golgiapparatus
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os08g18110 / Ta.9049.3.S1_a_at / Golgiapparatus
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os06g04450 / TaAffx.121446.1.S1_at / Golgiapparatus/Cytoplasm
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os06g04500 / TaAffx.32265.1.S1_at / Golgiapparatus/Cytoplasm
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os12g07050 / TaAffx.37243.1.S1_at / Cytoplasm
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os08g08020 / TaAffx.37427.2.S1_at / Cellmembrane
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os06g10340 / TaAffx.6394.1.S1_at / Cytoplasm
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os06g04600 / TaAffx.803.1.S1_at / Cytoplasm
LOC_Os05g44310 / Endoplasmic reticulum / Ta.10189.2.S1_at / LOC_Os12g43670 / TaAffx.85093.1.S1_at / Endoplasmic reticulum
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os03g26450 / Ta.2643.1.S1_at / Nucleus
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os07g25680 / Ta.29624.1.S1_at / Mitochondria/Chloroplast
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os03g38980 / Ta.4293.1.S1_at / Cytoplasm
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os05g47890 / Ta.7378.4.S1_at / Cytoplasm
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os06g11320 / Ta.7617.1.S1_at / Nucleus
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os03g09860 / Ta.8330.1.S1_a_at / Chloroplast
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os03g15430 / TaAffx.23365.1.S1_at / Nucleus
LOC_Os02g48720 / Mitochondria / Ta.1052.1.S1_x_at / LOC_Os03g61019 / TaAffx.58653.1.S1_at / Mitochondria
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os07g33340 / Ta.10861.1.A1_at / Nucleus
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os09g39590 / Ta.12414.1.S1_at / Nucleus
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os09g02700 / Ta.130.1.S1_at / Nucleus
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os06g37180 / Ta.14485.1.S1_at / Cytoplasm/Cellmembrane
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os08g39140 / Ta.217.1.S1_x_at / Cytoplasm
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os05g38530 / Ta.24515.1.S1_at / Mitochondria
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os06g21470 / Ta.26418.1.A1_at / Vacuole
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os12g38380 / Ta.27072.1.S1_at / Mitochondria
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os05g46570 / Ta.27944.1.S1_at / Nucleus/Chloroplast
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os04g38870 / Ta.6556.1.S1_at / Nucleus
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os10g28040 / Ta.7214.1.A1_at / Nucleus
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os08g08830 / Ta.8711.1.S1_at / Nucleus
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os10g29560 / TaAffx.10328.1.S1_at / Mitochondria
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os06g48310 / TaAffx.114318.1.S1_at / Nucleus
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os12g07050 / TaAffx.37243.1.S1_at / Cytoplasm
LOC_Os03g63590 / Endoplasmic reticulum / Ta.10722.1.S1_at / LOC_Os11g16540 / TaAffx.59754.1.S1_at / Chloroplast
LOC_Os01g14830 / Mitochondria/Chloroplast / Ta.11107.1.S1_s_at / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os03g03020 / Chloroplast / Ta.12746.1.S1_at / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os02g12740 / Vacuole / Ta.13597.1.A1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os01g15110 / Vacuole / Ta.13627.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g57310 / Golgiapparatus / Ta.13966.2.S1_s_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g42320 / Nucleus / Ta.14373.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g63430 / Chloroplast / Ta.14571.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g37920 / Chloroplast / Ta.1849.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os01g64650 / Nucleus / Ta.20692.1.A1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os07g39270 / Plastid/Chloroplast / Ta.20757.1.S1_at / LOC_Os07g46220 / Ta.7219.2.S1_at / Mitochondria
LOC_Os01g54540 / Chloroplast / Ta.2076.1.S1_at / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os01g56550 / Nucleus / Ta.21101.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g02960 / Nucleus / Ta.21252.1.S1_x_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g16110 / Nucleus/Cytoplasm / Ta.22868.1.S1_at / LOC_Os03g63590 / Ta.10722.1.S1_at / Endoplasmic reticulum
LOC_Os01g01700 / Nucleus/Cytoplasm / Ta.24948.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os01g68940 / Nucleus / Ta.2594.1.S1_x_at / LOC_Os03g63590 / Ta.10722.1.S1_at / Endoplasmic reticulum
LOC_Os02g46350 / Mitochondria / Ta.26920.1.A1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g15350 / Mitochondria / Ta.27364.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g11050 / Nucleus/Cytoplasm / Ta.27536.1.S1_at / LOC_Os03g63590 / Ta.10722.1.S1_at / Endoplasmic reticulum
LOC_Os01g62244 / Nucleus/Endoplasmic reticulum / Ta.28708.1.S1_at / LOC_Os03g63590 / Ta.10722.1.S1_at / Endoplasmic reticulum
LOC_Os03g42320 / Golgiapparatus / Ta.3933.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os01g32800 / Nucleus / Ta.4085.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g18410 / Nucleus / Ta.4262.1.S1_a_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g05300 / Nucleus/Chloroplast / Ta.4402.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g53420 / Mitochondria / Ta.5100.2.S1_at / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os04g34450 / Mitochondria / Ta.5130.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os01g45274 / Chloroplast / Ta.5227.1.S1_at / LOC_Os02g03540 / Ta.5397.1.S1_at / Chloroplast
LOC_Os01g45274 / Chloroplast / Ta.5227.1.S1_at / LOC_Os02g47850 / Ta.6052.2.S1_a_at / Chloroplast
LOC_Os03g58840 / Nucleus / Ta.5773.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os04g38870 / Nucleus / Ta.6556.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g11100 / Cellmembrane / Ta.6666.1.S1_x_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g11830 / Cellmembrane / Ta.6942.2.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g58630 / Nucleus / Ta.8145.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g57760 / Endoplasmic reticulum / Ta.9455.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os03g28400 / Chloroplast / Ta.9504.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g04710 / Chloroplast / Ta.9982.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os05g37884 / Chloroplast / TaAffx.107836.2.S1_at / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os01g72220 / Cytoplasm / TaAffx.111549.1.S1_at / LOC_Os03g63590 / Ta.10722.1.S1_at / Endoplasmic reticulum
LOC_Os01g01510 / Nucleus / TaAffx.118952.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g24612 / Plastid/Chloroplast / TaAffx.128946.1.A1_at / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os03g10060 / Chloroplast / TaAffx.132271.1.S1_at / LOC_Os07g39270 / Ta.20757.1.S1_at / Plastid/Chloroplast
LOC_Os03g56820 / Cytoplasm / TaAffx.14219.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os01g33020 / Endoplasmic reticulum / TaAffx.25796.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os01g08400 / Golgiapparatus / TaAffx.3185.1.S1_s_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g03450 / Endoplasmic reticulum / TaAffx.47461.1.S1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g40870 / Nucleus/Cytoplasm/Cellmembrane / TaAffx.65577.1.A1_at / LOC_Os05g44310 / Ta.10189.2.S1_at / Endoplasmic reticulum
LOC_Os02g45120 / Nucleus / TaAffx.85472.1.S1_at / LOC_Os03g63590 / Ta.10722.1.S1_at / Endoplasmic reticulum

a Proteins that were upregulated and downregulated in rice orthologous proteins.

b Protein 2: protein that interacts with protein 1.

1

1