Strain or plasmid / Relevant characteristics / Source or reference
E. coli
BR8706 / =Stbl2 Δ(lac-proAB) Δ(araFGH) ΔaraEp PCP18-araE; araE under constitutive CP18 promoter / (1)
CVC1881 / BR8706 l::500bp upstream region of parA1 (2959004 - 2958505) fused to lacZ / This study
CVC1882 / BR8706 l::500bp upstream region of ompU (676380 - 675881) fused to lacZ / This study
XL1-Blue / Strain for cloning / Agilent Technologies
V. cholerae
CVC796 / El Tor N16961; StrR / (2)
CVC797 / CVC796 DparA1 (Same as LK626) / (3)
CVC1118 / N16961 hapR+
CVC1123 / CVC1118 DparB1::Zeo / (4)
CVC1124 / CVC1118 DparAB1::Zeo / (4)
Saccharomyces cerevisiae
AH109 / MATa trp1-901 leu2-3 112 ura3-52 his3-200 gal4D gal80D LYS2::GAL1UAS-GAL1TATA-HIS3 GAL2UAS-GAL2TATA-ADE2 URA3::MEL1UAS-MEL1 TATA-lacZ / Clontech
EGY48 / MATa trp1 his3 ura3 lexAops-LEU2 / Clontech
Y187 / MATa ura3- 52 his3- 200 ade2- 101 trp1- 901 leu2- 3 112 gal4D, met– gal80D URA3::GAL1UAS -GAL1TATA -lacZ / Clontech
Plasmids
pBAD24 / PBAD cloning vector, pBRori; ApR / (4)
pBJH1 / pEG202 + parA1; ApR / (4)
pBJH3 / pKT25 + parA1; KmR / (4)
pBJH4 / pKT25 + parB1; KmR / (4)
pBJH5 / pUT18C + parA1; ApR / (4)
pBJH6 / pUT18C + parB1; ApR / (4)
pBJH7 / pUT18C + ompU (675880 - 674828); ApR / This study
pBJH9 / pKT25 + ompU (675880 - 674828); KmR / This study
pBJH15 / pDSW209 + parB1 (2957704 - 2956823); ApR / This study
pBJH17 / pMLB1109 + PparAB1 (2959004 - 2958503); ApR / This study
pBJH18 / pMLB1109 + PompU (676384 - 675881); ApR / This study
pBJH23 / pEG202 + parB1; ApR / (4)
pBJH34 / pMLB1109 + 500bp upstream region of VC0067 (68617 - 68118); ApR / This study
pBJH36 / pMLB1109 + 500bp upstream region of VC0076
(77135 - 76636); ApR / This study
pBJH37 / pMLB1109 + 500bp upstream region of VC0069 (68796 - 69295); ApR / This study
pBJH65 / A promoter cloning vector with a gfp reporter gene, pBRori; ApR / This study
pBJH89 / pBJH65 + parAB1 with promoter (2958605 - 2956823); ApR / This study
pBJH90 / pBJH65 + parAB1 (2958504 - 2956823); ApR / This study
pBJH91 / pBJH65 + parB1 (2957704 - 2956823); ApR / This study
pBJH105 / pGB2 + parS1-1 (62438 - 62423); SpR / This study
pBJH119 / pMLB1109 + 100 bp upstream region of ompU (675980 - 675881); ApR / This study
pBJH120 / pMLB1109 + 400 bp upstream region of ompU (676280 - 675881); ApR / This study
pBJH128 / pMLB1109 + 200 bp upstream region of ompU (676080 - 675881); ApR / This study
pBJH129 / pMLB1109 + 320 bp upstream region of ompU (676180 - 675881); ApR / This study
pBJH138 / pMLB1109 + 180 bp upstream region of ompU (676060 - 675881); ApR / This study
pBJH139 / pMLB1109 + 250 bp upstream region of ompU (676310 - 675881); ApR / This study
pBJH142 / pMLB1109 + 210 bp upstream region of ompU (676090 - 675881); ApR / This study
pBJH143 / pMLB1109 + 220 bp upstream region of ompU (676100 - 675881); ApR / This study
pBJH144 / pMLB1109 + 230 bp upstream region of ompU (676110 - 675881); ApR / This study
pBJH145 / pMLB1109 + 240 bp upstream region of ompU (676120 - 675881); ApR / This study
pBJH172 / pKT25 + toxRS (1048024 - 1046644); KmR / This study
pBJH173 / pUT18C + toxRS (1048024 - 1046644); ApR / This study
pDSW209 / A pTrc99A derived vector for generating IPTG inducible gfp fusions, pBRori; ApR / (5)
pEG202 / Yeast two-hybrid bait vector, pBRori, 2μ ori; HIS3, ApR / Clontech
pGADT7g / Yeast two-hybrid prey vector, pBRori, 2μ ori; LEU2, ApR / (6, 7)
pGBGT7g / Yeast two-hybrid bait vector, pBRori, 2μ ori; TRP1, GenR / (8)
pGB2 / A pSC101 derived vector; SpR / (9)
pJG4-5 / Yeast two-hybrid prey vector, pUCori, 2μ ori; TRP1, ApR / Clontech
pMLB1109 / Promoter cloning vector with the lacZ reporter gene, pBRori; ApR / M.L. Berman
pRKG212 / pBAD24 + parB1; ApR / (4)
pKT25 / Bacterial two-hybrid bait vector, p15Aori; KmR / Euromedex
pRN005 / pBAD24 + parAB1; ApR / (4)
pRN006 / pBAD24 + parA1; ApR / (4)
pSH18-34 / Yeast two-hybrid reporter vector, pBRori, 2μ ori; URA3, ApR / Clontech
pUT18C / Bacterial two-hybrid prey vector, pUCori; ApR / Euromedex

1. Fekete RA, Chattoraj DK. 2005. A cis-acting sequence involved in chromosome segregation in Escherichia coli. Mol. Microbiol. 55:175-183.

2. Heidelberg JF, Eisen JA, Nelson WC, Clayton RA, Gwinn ML, Dodson RJ, Haft DH, Hickey EK, Peterson JD, Umayam L, Gill SR, Nelson KE, Read TD, Tettelin H, Richardson D, Ermolaeva MD, Vamathevan J, Bass S, Qin H, Dragoi I, Sellers P, McDonald L, Utterback T, Fleishmann RD, Nierman WC, White O, Salzberg SL, Smith HO, Colwell RR, Mekalanos JJ, Venter JC, Fraser CM. 2000. DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406:477-483.

3. Saint-Dic D, Frushour BP, Kehrl JH, Kahng LS. 2006. A parA Homolog Selectively Influences Positioning of the Large Chromosome Origin in Vibrio cholerae. J. Bacteriol. 188:5626-5631.

4. Kadoya R, Baek JH, Sarker A, Chattoraj DK. 2011. Participation of Chromosome Segregation Protein ParAI of Vibrio cholerae in Chromosome Replication. J. Bacteriol. 193:1504-1514.

5. Amann E, Ochs B, Abel KJ. 1988. Tightly regulated tac promoter vectors useful for the expression of unfused and fused proteins in Escherichia coli. Gene 69:301-315.

6. Rajagopala SV, Uetz P. 2011. Analysis of protein-protein interactions using high-throughput yeast two-hybrid screens. Methods Mol. Biol. 781:1-29.

7. Uetz P, Dong YA, Zeretzke C, Atzler C, Baiker A, Berger B, Rajagopala SV, Roupelieva M, Rose D, Fossum E, Haas J. 2006. Herpesviral protein networks and their interaction with the human proteome. Science 311:239-242.

8. Rajagopala SV, Sikorski P, Kumar A, Mosca R, Vlasblom J, Arnold R, Franca-Koh J, Pakala SB, Phanse S, Ceol A, Hauser R, Siszler G, Wuchty S, Emili A, Babu M, Aloy P, Pieper R, Uetz P. 2014. The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. PMID:24561554.

9. Churchward G, Belin D, Nagamine Y. 1984. A pSC101-derived plasmid which shows no sequence homology to other commonly used cloning vectors. Gene 31:165-171.