Table S3. Genes Down-Regulated Afteroverexpression of Mybhthat Encode Chloroplastic Proteins

Table S3. Genes down-regulated afteroverexpression of MYBHthat encode chloroplastic proteins.

Fold change (normalized to WT)
Function / AGI number / Description / WT / atmybs3 / MYBS3OX-1
Chloroplast
AT3G04760 / Pentatricopeptide repeat superfamily protein / 1 / 0.8419 / 0.4405
AT1G54780 / Encodes thylakoid lumen protein / 1 / 1.0684 / 0.4142
AT1G30520 / Encodes a chloroplast O-succinylbenzoyl-CoA ligase (AAE14) / 1 / 0.8636 / 0.3382
AT3G63140 / Ribonuclease activity that is involved in plastid rRNA maturation / 1 / 0.7563 / 0.4968
AT4G09160 / SEC14 cytosolic factor family protein / 1 / 0.9363 / 0.4989
AT4G27440 / Protochlorophyllide oxidoreductase B (PORB) / 1 / 0.6945 / 0.3617
AT3G08920 / Rhodanese/Cell cycle control phosphatase superfamily protein / 1 / 0.7849 / 0.3642
AT1G52220 / Unknown protein / 1 / 0.9611 / 0.4965
AT1G76080 / Encodes a thioredoxin (CDSP32) / 1 / 1.2650 / 0.3837
AT1G06680 / Encodes a 23 kD extrinsic protein (PSBP-1) / 1 / 0.9912 / 0.4908
AT2G41560 / Encodes a calmodulin-regulated Ca(2+)-ATPase / 1 / 0.9214 / 0.3148
PSI J protein / 1 / 1.1014 / 0.4430
AT5G52970 / Thylakoid lumen 15.0 kDa protein / 1 / 0.6056 / 0.4639
AT1G76240 / Unknown protein / 1 / 1.1725 / 0.3632
AT4G09650 / Encodes the chloroplast ATPase delta-subunit (ATPD) / 1 / 0.9583 / 0.4693
AT1G67700 / Unknown protein / 1 / 1.0013 / 0.4770
AT5G23020 / Methylthioalkymalate synthase-like (IMS2) / 1 / 1.1442 / 0.4770
AT5G54510 / Encodes an IAA-amido synthase (DFL1) / 1 / 1.4426 / 0.4226
AT2G04270 / Putative ribonuclease E / 1 / 0.8825 / 0.4531
AT1G14345 / NAD(P)-linked oxidoreductase superfamily protein / 1 / 0.8507 / 0.4998
AT1G59720 / Pentatricopeptide repeat protein (CRR28) / 1 / 0.6997 / 0.4717
Ribosomal protein L16 / 1 / 0.8372 / 0.3445
NADH dehydrogenase subunit / 1 / 0.8707 / 0.4119
RNA polymerase beta' subunit-2 / 1 / 0.7392 / 0.3584
AT1G19715 / Mannose-binding lectin superfamily protein / 1 / 0.7918 / 0.4194
AT1G19920 / Encodes a chloroplast form of ATP sulfurylase (APS2) / 1 / 0.8752 / 0.4629
AT1G54500 / Rubredoxin-like superfamily protein / 1 / 0.8183 / 0.4029
AT3G27160 / GHS1 encodes plastid ribosomal protein S21 / 1 / 0.8925 / 0.4342
NADH dehydrogenase ND4 / 1 / 0.8944 / 0.4577
AT4G19170 / Similar to nine-cis-epoxycarotenoid dioxygenase (NCED4) / 1 / 1.2012 / 0.3495
AT3G50240 / Encodes a kinesin-related protein (KICP-02) / 1 / 0.6203 / 0.4394
AT5G45680 / Peptidyl-prolyl isomerase / 1 / 0.7814 / 0.4102
AT3G17470 / Ca2+-activated RelA/spot homolog (CRSH) / 1 / 1.2326 / 0.4492
AT5G66570 / Encodes a protein that is an extrinsic subunit of photosystem II / 1 / 1.1029 / 0.4906
AT3G55330 / PsbP-like protein 1 (PPL1) / 1 / 0.7538 / 0.3856
AT3G04260 / Plastid transcriptionally active 3 (PTAC3) / 1 / 1.0186 / 0.4824
AT3G18390 / Unknown protein (EMB1865) / 1 / 0.7279 / 0.3889
AT5G35170 / Adenylate kinase-like protein / 1 / 0.7608 / 0.3967
AT4G26530 / Fructose-bisphosphate aldolase-like protein / 1 / 0.9701 / 0.1173
AT3G09550 /// AT3G21055 / Ankyrin repeat family protein / 1 / 1.1169 / 0.3717
AT1G32060 / Phosphoribulokinase (PRK) / 1 / 0.8024 / 0.3518
AT3G63160 / Putative protein outer envelope membrane protein / 1 / 0.8139 / 0.3230
Ribosomal protein S16 / 1 / 1.5836 / 0.4764
AT2G42540 / Cold-regulated protein (COR15A) / 1 / 0.7483 / 0.4347
Ribosomal protein S8 / 1 / 0.6793 / 0.2172
AT4G03400 / Encodes a GH3-related gene (DFL2) / 1 / 1.0175 / 0.2629
RNA polymerase alpha subunit / 1 / 0.7053 / 0.4030
Unknown protein / 1 / 1.4908 / 0.4646
AT1G74070 / Cyclophilin-like peptidyl-prolyl cis-trans isomerase / 1 / 0.7114 / 0.3478
AT3G09580 / FAD/NAD(P)-binding oxidoreductase / 1 / 0.8797 / 0.4251
AT3G48250 / Pentatricopeptide repeat protein / 1 / 0.7505 / 0.4863
AT4G19430 / Unknown protein / 1 / 1.5431 / 0.2996
AT3G13120 / 30S ribosomal protein S10 / 1 / 0.9259 / 0.4706
AT5G04810 / Pentatricopeptide (PPR) repeat-containing protein / 1 / 1.0187 / 0.4402
AT4G27440 / NADPH:protochlorophyllide oxidoreductase B (PORB) / 1 / 0.6945 / 0.3617
AT1G15980 / Encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex / 1 / 1.2660 / 0.4468
AT3G50350 / Unknown protein / 1 / 0.9183 / 0.4870
AT1G65010 / Unknown protein / 1 / 0.7259 / 0.4901
AT3G17040 / RNA tetratricopeptide repeat-containing protein (HCF107) / 1 / 0.7774 / 0.4676
AT1G64510 / Plastid ribosomal protein S6 / 1 / 0.9119 / 0.4434
AT5G39210 / Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH complex) / 1 / 0.8935 / 0.4062
AT5G17670 / Alpha/beta-hydrolases superfamily protein / 1 / 0.6539 / 0.3907
AT3G27580 / Serine/threonine-protein kinase (ATPK7) / 1 / 0.9062 / 0.4989
AT1G50900 / Ankyrin domain containing protein / 1 / 1.0521 / 0.4357
AT4G35430 /// AT4G35440 / Unknown protein / 1 / 1.0929 / 0.4553
AT3G54050 / Fructose-bisphosphatase / 1 / 0.9452 / 0.2971
AT5G55740 / Encodes a member of the E+ subgroup of the PPR protein family / 1 / 0.7662 / 0.2900
AT1G12250 / Pentapeptide repeat-containing protein / 1 / 1.0633 / 0.4968
AT2G23670 / Homolog of synechocystis YCF37 (YCF37) / 1 / 0.8526 / 0.4979
AT1G70070 / RNA helicase (ISE2) / 1 / 0.7277 / 0.4477
AT3G62410 / CP12 protein precursor-like protein (CP12-2) / 1 / 1.1603 / 0.2983
AT1G76620 / Unknown protein / 1 / 0.6839 / 0.4975
AT5G51540 /// AT5G51545 / Zincin-like metalloproteases family protein (LPA2) / 1 / 0.8077 / 0.4870
AT1G51400 / Photosystem II 5 kD protein / 1 / 0.9889 / 0.4861
AT4G19100 / Unknown protein / 1 / 0.9345 / 0.3264
AT3G46780 / Plastid transcriptionally active 16 (PTAC16) / 1 / 0.7039 / 0.4016
AT1G68590 / Ribosomal protein PSRP-3 / 1 / 1.0272 / 0.4436
AT3G23700 / Nucleic acid-binding proteins superfamily / 1 / 1.0839 / 0.4802
AT1G71970 / Unknown protein / 1 / 1.1829 / 0.3706
AT4G02770 / Photosystem I reaction center subunit II (PsaD1) / 1 / 1.0503 / 0.4988
AT4G21990 / Encodes a protein disulfide isomerase / 1 / 1.0422 / 0.3855
AT5G35790 / Plastidic glucose-6-phosphate dehydrogenase (G6PD1) / 1 / 0.9183 / 0.4765
AT1G65230 / Unknown protein / 1 / 0.6381 / 0.4393