Supplementary Table 3: Blastx Analysis-Based Homology Matches of Unigenes Obtained By

Supplementary Table 3: BLASTx analysis-based homology matches of unigenes obtained by separately assemblingsubtractive EST sequences from useful tissues of individual plants.

S. No. / Unigene / Length (bp) / BLASTx homology / Score / E-value
C. longa
1 / CL19 / 541 / PREDICTED: similar to Jerky protein [Macaca mulatta] / 221 / 3e-56
2 / CL20 / 411 / granule-bound starch synthase II [Oryza sativa Indica Group]
waxy1 precursor [Zea mays] / 181
161 / 3e-44
3e-38
3 / CL59 / 238 / No significant similarity found
4 / CL85 / 268 / No significant similarity found
5 / CLContig1 / 120 / predicted protein [Physcomitrella patens subsp. patens]
mandelonitrile lyase [Arabidopsis thaliana]
glucose-methanol-choline oxidoreductase family protein [Arabidopsis thaliana] / 48.5
48.5
43.1 / 3e-04
3e-04
0.014
6 / CLContig2 / 507 / putative senescence-associated protein [Pisum sativum]
cell wall-associated hydrolase [Aggregatibacter actinomycetemcomitans D7S-1] / 235
59.7 / 1e-60
1e-07
7 / CLContig3 / 172 / 31.7 kDa class I endochitinase-antifreeze protein precursor [Secale cereale] / 41.2 / 0.053
8 / CLContig4 / 290 / hypothetical protein AZL_014880 [Azospirillum sp. B510] / 36.2 / 1.3
9 / CLContig5 / 615 / 14-3-3 protein [Nicotiana tabacum]
GRF2 (GENERAL REGULATORY FACTOR 2); protein binding / protein phosphorylated amino acid binding [Arabidopsis thaliana] / 197
189 / 3e-49
1e-46
10 / CLContig6 / 273 / metallothionein class I type 3 [Avicennia marina] / 57.0 / 9e-07
11 / CLContig7 / 187 / No significant similarity found
S. cordifolia
1 / SC1 / 448 / hypothetical protein [Tetrahymena thermophila SB210]
putative senescence-associated protein [Pisum sativum] / 55.1
47.4 / 3e-06
6e-04
2 / SC12 / 134 / hypothetical protein TRIADDRAFT_32270 [Trichoplax adhaerens]
hypothetical protein NEMVEDRAFT_v1g144466 [Nematostella vectensis] / 37.4
36.6 / 0.59
1.0
3 / SC Contig1 / 685 / unknown [Medicago truncatula]
senescence-associated protein [Picea abies]
cytochrome P450-like TBP protein [Lilium longiflorum] / 194
186
87.0 / 3e-48
8e-46
6e-16
C. wightii
1 / CW50 / 109 / TonB-dependent receptor domain protein [Brevundimonas sp. BAL3] / 72.8 / 1e-11
2 / CW54 / 169 / No significant similarity found
3 / CW117 / 274 / unknown [Glycine max]
glutaredoxin [Populus trichocarpa] / 79.3
76.6 / 1e-13
9e-13
4 / CW126 / 270 / sulfate transporter [Acinetobacter calcoaceticus RUH2202] / 144 / 3e-33
5 / CWContig1 / 295 / putative senescence-associated protein [Cupressus sempervirens] / 182 / 9e-45
6 / CWContig2 / 134 / hypothetical protein SORBIDRAFT_0531s002010 [Sorghum bicolor] / 49.3 / 1e-04
7 / CWContig3 / 247 / B-cell CLL/lymphoma 11A [Danio rerio]
hypothetical protein SORBIDRAFT_08g019583 [Sorghum bicolor] / 30.4
27.7 / 1.0
9.7
8 / CWContig4 / 194 / small heat stress protein Hsp17.4-CII [Solanum peruvianum]
chaperone [Agave tequilana] / 63.5
60.1 / 8e-09
8e-08
9 / CWContig5 / 991 / putative senescence-associated protein [Pisum sativum]
cell wall-associated hydrolase [Clostridium botulinum Bf] / 97.4
47.0 / 5e-19
7e-04
10 / CWContig6 / 272 / hypothetical protein SORBIDRAFT_01g024221 [Sorghum bicolor]
putative senescence-associated protein [Trichosanthes dioica]
histone acetyltransferase, putative [Aspergillus fumigatus A1163] / 96.7
84.3
35.0 / 8e-19
4e-15
2.9
11 / CWContig7 / 272 / hypothetical protein SORBIDRAFT_01g024170 [Sorghum bicolor]
Transcription factor [Brugia malayi]
cytochrome P450 like_TBP [Nicotiana tabacum]
senescence-associated protein [Plasmodium yoelii yoelii str. 17XNL] / 116
106
93.6
60.1 / 1e-24
1e-21
7e-18
3e-11
R. communis
1 / RC3 / 100 / hypothetical protein SORBIDRAFT_0057s002150 [Sorghum bicolor] / 61.6 / 3e-08
2 / RC21 / 99 / No significant similarity found
3 / RC35 / 290 / hypothetical protein AZL_014880 [Azospirillum sp. B510]
PREDICTED: similar to splicing factor 3b, subunit 1 [Monodelphis domestica] / 36.2
34.3 / 1.3
4.9
4 / RCContig1 / 303 / putative senescence-associated protein [Lilium longiflorum]
hypothetical protein [Arabidopsis thaliana] / 155
110 / 9e-38
7e-23
5 / RCContig2 / 246 / predicted protein [Coprinopsis cinerea okayama7#130] / 26.6 / 5.8
6 / RCContig3 / 194 / small heat stress protein Hsp17.4-CII [Solanum peruvianum]
chaperone [Agave tequilana] / 60.8
57.4 / 5e-08
5e-07
7 / RCContig4 / 293 / hypothetical protein SORBIDRAFT_01g024170 [Sorghum bicolor]
Transcription factor [Brugia malayi]
senescence-associated protein [Micromonas pusilla CCMP1545]
cytochrome P450 like_TBP [Nicotiana tabacum] / 104
94.7
93.6
83.6 / 3e-21
3e-18
7e-18
7e-15
S. album
1 / SA50 / 78 / No significant similarity found
2 / SA55 / 89 / No significant similarity found
3 / SAContig1 / 380 / No significant similarity found
4 / SAContig2 / 362 / No significant similarity found
5 / SAContig3 / 427 / P2X purinoceptor 2 [Anoplopoma fimbria]
hypothetical protein ED21_23761 [Erythrobacter sp. SD-21]
hexamerin 2-like [Belgica antarctica] / 33.9
33.9
33.5 / 6.5
6.5
8.4
6 / SAContig4 / 319 / cytochrome P450 like_TBP [Nicotiana tabacum]
senescence-associated protein [Micromonas pusilla CCMP1545]
3-isopropylmalate dehydratase, large subunit [Planctomyces limnophilus DSM 3776] / 138
61.6
33.5 / 2e-31
3e-08
8.4
7 / SAContig5 / 234 / lipid binding protein, putative [Ricinus communis] / 39.7 / 0.12
8 / SAContig6 / 297 / putative senescence-associated protein [Cupressus sempervirens] / 182 / 1e-44
9 / SAContig7 / 315 / hypothetical protein SORBIDRAFT_0057s002150 [Sorghum bicolor]
serine/threonine protein kinase [Methylocella silvestris BL2] / 167
36.2 / 4e-40
1.3
10 / SAContig8 / 341 / progesterone 5beta reductase-A [Nicotiana tabacum] / 186 / 1e-45
11 / SAContig9 / 499 / major facilitator superfamily transporter tetracycline:cation symporter [Staphylococcus aureus A9765] / 36.2 / 1.3
A. racemosus
1 / AR2 / 263 / hypothetical protein Bpet2171 [Bordetella petrii DSM 12804]
splicing factor, arginine/serine-rich 6a [Danio rerio]
1-deoxy-D-xylulose-5-phosphate synthase [Streptomyces sp. e14] / 113
42.4
35.8 / 8e-24
0.018
1.7
2 / AR5 / 440 / dihydroorotase [Acinetobacter sp. SH024]
dihydroorotase [Zea mays] / 295
162 / 1e-78
1e-38
3 / AR22 / 114 / hypothetical protein CYtaCp093 [Cycas taitungensis] / 77.8 / 4e-13
4 / AR25 / 329 / metallothionein type 3 [Typha angustifolia]
ripening-associated protein [Musa acuminate] / 63.9
34.3 / 1e-15
5.0
5 / AR30 / 78 / No significant similarity found
6 / AR47 / 67 / No significant similarity found
7 / AR54 / 128 / No significant similarity found
8 / AR58 / 140 / hypothetical protein CE1543 [Corynebacterium efficiens YS-314] / 55.1 / 3e-06
9 / AR68 / 303 / Amine oxidase [copper-containing] precursor, putative [Ricinus communis]
tyramine oxidase [Escherichia coli O26:H11 str. 11368] / 175
75.1 / 2e-42
3e-12
10 / AR73 / 616 / PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera]
lustrin A [Zea mays] / 160
41.6 / 4e-42
0.031
11 / AR79 / 151 / conserved hypothetical protein [Listeria monocytogenes J2818] / 69.3 / 1e-10
12 / AR80 / 421 / unknown [Glycine max]
retrotransposon protein [Oryza sativa Indica]
leucine rich protein [Arachis hypogaea]
putative cysteine synthase Voas-tl5 [Vicia sativa] / 125
80.5
63.2
44.7 / 1e-27
6e-14
5e-11
0.004
13 / AR84 / 575 / beta alanine--pyruvate transaminase [Acinetobacter sp. 6014059] / 388 / 1e-106
14 / AR86 / 616 / conserved hypothetical protein [Ricinus communis]
SEL-1 [Glycine max] / 310
305 / 3e-83
9e-82
15 / AR88 / 374 / No significant similarity found
16 / AR89 / 362 / No significant similarity found
17 / AR96 / 304 / glycyl-tRNA synthetase subunit alpha [Acinetobacter sp. ADP1] / 199 / 9e-50
18 / AR97 / 297 / unknown [Glycine max]
CHK1 checkpoint-like protein [Helicoverpa armigera] / 97.4
73.2 / 5e-19
73.2
19 / AR100 / 407 / No significant similarity found
20 / AR101 / 318 / No significant similarity found
21 / AR103 / 483 / unnamed protein product [Vitis vinifera]
WD-40 repeat protein-like protein [Solanum tuberosum]
immature pollen 1 [Oryza sativa Japonica Group]
ribosome biogenesis-related protein [Cryptococcus neoformans var. neoformans JEC21] / 280
273
259
158 / 5e-74
5e-72
6e-68
2e-37
22 / AR105 / 405 / alanyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] / 241 / 2e-62
23 / AR106 / 371 / ubiquitin [Nicotiana tabacum] / 236 / 9e-61
24 / AR108 / 464 / predicted protein [Populus trichocarpa]
serine-pyruvate aminotransferase, putative [Ricinus communis] / 291
286 / 1e-77
7e-76
25 / AR113 / 415 / hypothetical protein [Magnetospirillum gryphiswaldense]
leucine rich protein [Arachis hypogaea] / 97.8
83.2 / 97.8
9e-15
26 / AR119 / 392 / cell shape determining protein, MreB/Mrl family [Brevundimonas subvibrioides ATCC 15264] / 124 / 5e-27
27 / AR120 / 608 / nitrate reductase [Tilia platyphyllos] / 330 / 3e-89
28 / AR122 / 373 / conserved hypothetical protein [Magnetospirillum gryphiswaldense]
cell wall-associated hydrolase [Microscilla marina ATCC 23134] / 57.4
72.8 / 4e-15
1e-11
29 / AR123 / 306 / acyl CoA oxidase [Streptomyces lividans TK24]
succinylarginine dihydrolase [Legionella longbeachae D-4968] / 34.7
34.3 / 3.8
3.8
30 / AR125 / 332 / PREDICTED: hypothetical protein [Vitis vinifera]
protein binding / structural molecule [Arabidopsis thaliana]
Membrane-bound lytic murein transglycosylase B-like protein [Frankia sp. EUN1f]
serine/threonine protein kinase [Pirellula staleyi DSM 6068] / 128
120
43.1
40.8 / 2e-28
5e-26
0.011
0.053
31 / AR130 / 350 / aconitate hydratase 1 [Propionibacterium acnes J165] / 231 / 3e-59
32 / AR135 / 198 / hypothetical protein SORBIDRAFT_0351s002020 [Sorghum bicolor] / 110 / 7e-23
33 / AR136 / 352 / PREDICTED: similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding isoform 2 [Vitis vinifera] / 204 / 3e-51
34 / AR137 / 401 / serine/threonine protein kinase [Rhodopseudomonas palustris DX-1] / 201 / 2e-50
35 / AR145 / 186 / PREDICTED: hypothetical protein [Vitis vinifera]
glycine-rich protein [Brassica oleracea] / 79.3
70.5 / 1e-13
6e-11
36 / AR150 / 597 / conserved hypothetical protein [Acinetobacter sp. SH024]
sulfite reductase [Acinetobacter calcoaceticus RUH2202] / 404
404 / 1e-111
2e-111
37 / ARContig1 / 437 / histone H3.3-like protein [Lolium perenne] / 151 / 3e-35
38 / ARContig2 / 380 / No significant similarity found
39 / ARContig3 / 371 / unnamed protein product [Macaca fascicularis] / 76.6 / 9e-13
40 / ARContig4 / 363 / No significant similarity found
41 / ARContig5 / 496 / 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
genetic modifier [Zea mays]
haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] / 249
235
220 / 7e-65
1e-60
4e-56
42 / ARContig6 / 296 / putative senescence-associated protein [Lilium longiflorum]
cell wall-associated hydrolase [Candidatus Pelagibacter sp. HTCC7211] / 182
56.2 / 9e-45
1e-06
43 / ARContig7 / 270 / licD3 protein [Prevotella veroralis F0319] / 34.3 / 4.9
44 / ARContig8 / 524 / major facilitator superfamily transporter tetracycline:cation symporter [Staphylococcus aureus A9765] / 36.2 / 1.3
45 / ARContig9 / 263 / predicted protein [Populus trichocarpa]
cell wall-associated hydrolase [Microscilla marina ATCC 23134] / 117
69.7 / 6e-25
1e-10
46 / ARContig10 / 197 / ORF61c [Pinus koraiensis]
Hypothetical protein [Oryza sativa Indica Group] / 107
61.6 / 5e-22
3e-08
47 / ARContig11 / 963 / cytochrome P450 like_TBP [Nicotiana tabacum]
senescence-associated protein [Micromonas pusilla CCMP1545] / 165
107 / 1e-39
3e-22
48 / ARContig12 / 325 / hypothetical protein SORBIDRAFT_0057s002150 [Sorghum bicolor] / 176 / 6e-43
49 / ARContig13 / 364 / glutathione S-transferase [Xanthomonas oryzae pv. oryzae KACC10331] / 34.7 / 3.7
V. zizanioides
1 / VZ5 / 247 / senescence-associated protein [Micromonas pusilla CCMP1545]
Transcription factor [Brugia malayi]
cytochrome P450 like_TBP [Nicotiana tabacum] / 93.6
77.4
68.6 / 7e-18
5e-13
2e-10
2 / VZ13 / 252 / PREDICTED: hypothetical protein [Saccoglossus kowalevskii] / 33.9 / 6.4
3 / VZ15 / 280 / oxidoreductase, 2OG-Fe oxygenase family protein [Zea mays] / 82.4 / 2e-14
4 / VZcontig1 / 305 / putative senescence-associated protein [Cupressus sempervirens] / 153 / 2e-38
5 / VZcontig2 / 194 / small heat stress protein Hsp17.4-CII [Solanum peruvianum]
chaperone [Agave tequilana] / 60.8
57.4 / 5e-08
5e-07
C. dactylon
1 / CD36 / 569 / putative gag-pol polyprotein [Zea mays]
retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] / 118
107 / 3e-25
5e-22
2 / CD72 / 409 / putative C-5 sterol desaturase [Alteromonas macleodii 'Deep ecotype'] / 34.7 / 5.7
3 / CD81 / 280 / No significant similarity found
4 / CD145 / 413 / Cinful1 polyprotein [Zea mays]
Transposable element protein, putative, Transposase_28 [Oryza sativa (japonica cultivar-group)]
tyrosine aminotransferase [Glycine max] / 38.5
33.9
33.9 / 0.39
9.7
9.7
5 / CDContig1 / 263 / predicted protein [Populus trichocarpa]
cell wall-associated hydrolase [Microscilla marina ATCC 23134] / 117
69.7 / 9e-25
2e-10
6 / CDContig2 / 380 / No significant similarity found
7 / CDContig3 / 283 / No significant similarity found
8 / CDContig4 / 497 / major facilitator superfamily transporter tetracycline:cation symporter [Staphylococcus aureus A9765] / 36.2 / 2.0
9 / CDContig5 / 270 / licD3 protein [Prevotella veroralis F0319] / 34.3 / 7.4
10 / CDContig6 / 178 / hypothetical protein SORBIDRAFT_01g007880 [Sorghum bicolor]
glutathione transporter [Zea mays]
small oligopeptide transporter, OPT family [Asparagus officinalis] / 48.9
48.1
40.0 / 3e-04
5e-04
0.14
11 / CDContig7 / 78 / No significant similarity found
12 / CDContig8 / 364 / No significant similarity found
P. longum
1 / PL47 / 111 / mandelonitrile lyase [Arabidopsis thaliana]
glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] / 42.7
40.8 / 0.014
0.054
2 / PL57 / 163 / 31.7 kDa class I endochitinase-antifreeze protein precursor [Secale cereale]
class I chitinase, putative [Ricinus communis] / 40.0
37.4 / 0.092
0.59
3 / PL59 / 360 / waxy 2 [Heliciopsis lanceolata]
granule-bound starch synthase I [Viburnum propinquum] / 191
188 / 2e-47
2e-46
4 / PL61 / 290 / hypothetical protein [Vitis vinifera]
Jacalin-like lectin domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] / 47.0
42.4 / 7e-04
0.018
5 / PLContig1 / 156 / No significant similarity found
6 / PLContig2 / 159 / cytochrome P450-like TBP protein [Lilium longiflorum]
senescence-associated protein [Picea abies] / 115
108 / 2e-24
2e-22
7 / PLContig3 / 149 / putative senescence-associated protein [Pisum sativum]
cell wall-associated hydrolase [Sulfurihydrogenibium yellowstonense / 98.2
39.3 / 3e-19
0.16
8 / PLContig4 / 292 / hypothetical protein PANDA_017592 [Ailuropoda melanoleuca]
matrix metalloproteinase-17 preproprotein [Homo sapiens] / 37.4
34.3 / 0.59
5.0
O. sanctum
1 / OS13 / 713 / 4-coumarate:CoA ligase [Ipomoea batatas] / 293 / 2e-82
2 / OS61 / 184 / No significant similarity found
3 / OS81 / 376 / vasodilator-stimulated phosphoprotein [Xenopus laevis]
PREDICTED: hypothetical protein [Vitis vinifera]
FLK, putative, expressed [Oryza sativa (japonica cultivar-group)] / 40.0
38.5
35 / 0.23
0.67
7.4
4 / OS84 / 284 / hypothetical protein [Culex quinquefasciatus] / 35.0 / 7.4
5 / OS100 / 283 / No significant similarity found
6 / OS104 / 217 / hypothetical protein SORBIDRAFT_03g002520 [Sorghum bicolor] / 77.4 / 1e-12
7 / OS105 / 283 / No significant similarity found
8 / OS108 / 389 / No significant similarity found
9 / OSContig1 / 711 / PREDICTED: hypothetical protein [Vitis vinifera]
spliceosome associated protein, putative [Ricinus communis] / 361
353 / 3e-98
9e-96
10 / OSContig2 / 626 / hypothetical protein [Vitis vinifera]
flavonoid 3-hydroxylase, putative [Ricinus communis] / 275
267 / 2e-72
7e-70
11 / OSContig3 / 386 / cytochrome P450, putative [Ricinus communis]
brassinosteroid C-3 oxidase [Hordeum vulgare subsp. vulgare]
steroid 23-alpha-hydroxylase [Zinnia elegans] / 104
81.6
63.9 / 1e-20
7e-14
1e-08
12 / OSContig4 / 852 / cytochrome P450 [Helianthus tuberosus]
isoflavone 3'-hydroxylase [Medicago truncatula] / 405
222 / 2e-111
3e-56
13 / OSContig5 / 380 / No significant similarity found.
14 / OSContig6 / 604 / major facilitator transporter [Staphylococcus aureus A6224] / 36.2 / 3.3
15 / OSContig7 / 275 / No significant similarity found
16 / OSContig8 / 364 / No significant similarity found
17 / OSContig9 / 263 / predicted protein [Populus trichocarpa]
hypothetical protein [Vitis vinifera]
cell wall-associated hydrolase [Microscilla marina ATCC 23134] / 117
99.4
69.7 / 1e-24
3e-19
3e-10
18 / OSContig10 / 747 / putative gag-pol polyprotein [Zea mays]
retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] / 125
124 / 3e-27
1e-26
19 / OSContig11 / 289 / No significant similarity found
A. calamus
1 / AC18 / 362 / No significant similarity found
2 / AC19 / 250 / conserved hypothetical protein [Vibrio harveyi 1DA3]
metallothionein-like protein [Gossypium hirsutum] / 35.0
33.9 / 2.9
6.4
3 / AC20 / 78 / No significant similarity found
4 / AC27 / 435 / ATP-depedent Clp protease proteolytic subunit [Acorus americanus]
NADH dehydrogenase subunit 2 [Caenorhabditis elegans] / 37.0
33.5 / 0.75
8.3
5 / AC33 / 158 / hypothetical protein [Populus trichocarpa]
lustrin A-like [Oryza sativa Japonica Group] / 91.7
46.6 / 3e-17
0.001
6 / AC47 / 145 / No significant similarity found
7 / AC48 / 159 / cytochrome P450-like TBP protein [Lilium longiflorum]
senescence-associated protein [Picea abies] / 115
108 / 2e-24
2e-22
8 / ACContig1 / 296 / putative senescence-associated protein [Cupressus sempervirens]
cell wall-associated hydrolase [Candidatus Pelagibacter sp. HTCC7211] / 182
56.6 / 9e-45
9e-07
9 / ACContig2 / 693 / hypothetical protein RCOM_1595950 [Ricinus communis]
jacalin lectin family protein [Arabidopsis thaliana] / 73.2
68.6 / 3e-17
5e-12
P. zeylanica
1 / PZ62 / 122 / No significant similarity found
2 / PZ82 / 160 / small heat stress protein Hsp17.4-CII [Solanum peruvianum] / 60.8 / 5e-08
3 / PZContig1 / 218 / hypothetical protein BBAL3_269 [Brevundimonas sp. BAL3]
acetyltransferase [Brevundimonas subvibrioides ATCC 15264] / 113
88.2 / 8e-24
3e-16
4 / PZContig2 / 291 / PREDICTED: similar to Mixed lineage kinase 4 [Rattus norvegicus]
hypothetical protein SORBIDRAFT_01g026500 [Sorghum bicolor] / 34.7
33.5 / 3.8
8.5
5 / PZContig3 / 305 / putative senescence-associated protein [Cupressus sempervirens] / 153 / 2e-38