Supplementary Table 1 Genome differences between A. oryzae 3.042 and A. oryzae 100-8 (4 pages).

3.042 ID / Nucleotide change / 100-8 ID / Nucleotide change / non-synonymous (NS) or disrupting reading frame (DRF) / Function
GATA factor
Ao3042_04436 / - / AO1008_10425 / a / DRF / GATA factor
Hyphal growth
Ao3042_11016 / aaa / AO1008_08664 / --- / Serine/threonine protein kinase
Ao3042_04008 / t / AO1008_01901 / - / DRF / Sexual differentiation process protein
Ao3042_07096 / t / AO1008_06701 / a / NS / Ferric reductase, NADH/NADPH oxidase
Ao3042_05418 / g / AO1008_09297 / - / DRF / Glycolate oxidase
Ao3042_00019 / c / AO1008_11234 / - / DRF / Peroxisomal multifunctional β-oxidation protein
Spores
Ao3042_02674 / a / AO1008_05602 / - / DRF / Meltrin, fertilin
Others
Ao3042_09599 / g / AO1008_04008 / - / DRF / Multidrug/pheromone exporter, ABC superfamily
Ao3042_00028 / c / AO1008_11243 / - / DRF / Permease of the major facilitator superfamily
Ao3042_09877 / t / AO1008_08233 / - / DRF / Putative transporter
Ao3042_08319 / c / AO1008_03781 / - / DRF / Purine-cytosine permease FCY2
Ao3042_11820 / c / AO1008_07972 / - / DRF / Putative metal-dependent hydrolase
Ao3042_01525 / a / AO1008_00462 / t / NS / Vesicle coat complex AP-3, delta subunit
Ao3042_02418 / g / AO1008_07529 / - / DRF / AAA+-type ATPase
Ao3042_09273 / a / AO1008_11736 / - / DRF / Non-ribosomal peptide synthetase module
Ao3042_01479 / t / AO1008_09805 / a / NS / Non-ribosomal peptide synthetase module
Ao3042_01632 / c / AO1008_08072 / - / DRF / Putative dehydrogenase domain protein
Ao3042_10421 / a / AO1008_04846 / - / DRF / Polyketide synthase module
Ao3042_04748 / c / AO1008_06437 / - / DRF / RNA helicase nonsense mRNA reducing factor
Ao3042_09827 / t / AO1008_01745 / - / DRF / Putative ATP-dependent RNA helicase
Ao3042_03660 / t / AO1008_07652 / - / DRF / Putative helicase, DEAD-box superfamily
Ao3042_04535 / g / AO1008_06146 / - / DRF / 5'-3' exonuclease
Ao3042_08190 / - / AO1008_10852 / a / DRF / Alpha-galactosidase
Ao3042_01901 / - / AO1008_00602 / a / DRF / Putative beta-mannosidase
Ao3042_04014 / - / AO1008_01907 / c / DRF / Cellobiose dehydrogenase, putative
Ao3042_08655 / - / AO1008_04301 / a / DRF / Tannase, putative
Ao3042_00053 / a / AO1008_01591 / - / DRF / Exo-beta-1,3-glucanase Exg0
Ao3042_01621 / g / AO1008_08061 / - / DRF / D-aminoacylase, putative
Ao3042_00732 / t / AO1008_05812 / - / DRF / Aldehyde dehydrogenase
Ao3042_00434 / a / AO1008_08544 / - / DRF / Threonine dehydrogenase
Ao3042_00202 / a / AO1008_01815 / - / DRF / Geranylgeranyl pyrophosphate synthase
Ao3042_10083 / a / AO1008_00753 / - / DRF / Lignostilbene-alpha,beta-dioxygenase
Ao3042_01005 / t / AO1008_10543 / - / DRF / Molecular chaperone
Ao3042_04425 / - / AO1008_10414 / t / DRF / CCCH zinc finger and SMR domain protein
Ao3042_05378 / t / AO1008_09257 / - / DRF / Ubiquitin fusion degradation protein-2
Ao3042_03971 / - / AO1008_04573 / a / DRF / Serine/threonine protein kinase
Ao3042_07085 / a / AO1008_06712 / - / DRF / Zinc binding dehydrogenase, putative
Ao3042_02436 / g / AO1008_07547 / - / DRF / mRNA cleavage and polyadenylation factor II complex, subunit CFT2
Ao3042_04529 / t / AO1008_06140 / - / DRF / Phosphatidylinositol-4-phosphate 5-kinase