Supplementary Table 1. Functional Classification of 183 Differentially Expressed Transcripts

Supplementary Table 1.Functional classification of 183 differentially expressed transcripts in the presence of dye AR183 in P. oxalicumSAR-3 identified from the SSH library. The transcripts are listed according to their possible functions

S.No. / GenBank ID / Similarity of transcripts / Species / E-value
Metabolism
JK747250 / Isocitratedehydrogenase / P.chrysogenum Wisconsin 54-1255 / 3.00E-58
JK747253 / Cytidylyltransferase family protein / P. chrysogenum Wisconsin 54-1256 / 3.00E-54
JK747261 / Isochorismatase family hydrolase, putative / A. clavatus NRRL 1 / 1.00E-46
JK747272 / Zn-dependent alcohol dehydrogenases / P.chrysogenum Wisconsin 54-1256 / 6.00E-69
JK747276 / 3-ketoacyl-(acyl-carrier-protein) reductase / P.chrysogenum Wisconsin 54-1257 / 3.00E-92
JK747279 / Zn-dependent hydrolases / P.chrysogenum Wisconsin 54-1258 / 6.00E-113
JK747286 / Phosphatidylserine decarboxylase (PSD) / A. terreus NIH2624 / 2.00E-19
JK747425 / TPA: succinyl-CoAsynthetase beta subunit, putative / A. nidulans FGSC A4 / 3.00E-82
JK747299 / Mitochondrial aconitatehydratase, putative / A. clavatus NRRL 1 / 7.00E-14
JK747306 / Gamma-glutamylcyclotransferase (GGCT) / P.chrysogenum Wisconsin 54-1258 / 5.00E-29
JK747314 / 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase / A. niger / 3.70E+00
JK747323 / Methylenetetrahydrofolatereductase (MTHFR) / P.chrysogenum Wisconsin 54-1257 / 3.00E-50
JK747328 / Reversible isomerization of citrate and isocitrate / P.chrysogenum Wisconsin 54-1255 / 1.00E-67
JK747329 / Pyruvatedehydrogenasedihydrolipoyltransacetylase / P.chrysogenum Wisconsin 54-1256 / 4.00E-44
JK747330 / Esterases and lipases / P.chrysogenum Wisconsin 54-1255 / 1.00E-61
JK747331 / Glucan 1,4-alpha-glucosidase / Methanocellapaludicola SANAE / 2.4
JK747313 / Transaldolase partial mRNA / A. fumigatus Af293 / 1.00E-74
JK747357 / Aconitase / Ajellomycescapsulatus H88 / 9.00E-47
JK747358 / Glucan 1,4-alpha-glucosidase / Methanocellapaludicola SANAE / 2.4
JK747373 / Succinyl-CoA:3-ketoacid-coenzyme A transferase / 6.00E-70
JK747374 / Beta-galactosidase / Paenibacillus sp. JDR-2 / 1.10E-01
JK747375 / Anthranilatesynthase / Streptosporangiumroseum DSM 43021 / 4.20E-01
JK747376 / Conserved hypothetical protein, / A. terreus NIH2624 / 3.00E-15
JK747377 / Acetylserotoninmethytransferase-like protein (ASMTL) / A. oryzae RIB40 / 2.00E-10
JK747378 / Pyruvatedecarboxylase / P.chrysogenum Wisconsin 54-1255 / 1.00E-37
JK747379 / Hypothetical protein AN8172.2 / A. nidulans FGSC A4 / 9.00E-25
JK747380 / Mannitol 2-dehydrogenase / A. oryzae RIB40 / 3.00E-41
Transcription/post transcription
JK747263 / Putative transcription factor / P.expansum
JK747316 / Transcriptional accessory protein / P.chrysogenum Wisconsin 54-1255 / 7.00E-25
JK747359 / Post transcriptional gene expression / P.chrysogenum Wisconsin 54-1255 / 3.00E-05
JK747383 / Hypothetical protein AN2455.2 / A. nidulans FGSC A4 / 1.00E-23
JK747384 / C6 finger domain protein, putative / A. clavatus NRRL 1 / 9.00E-59
JK747385 / conserved hypothetical protein / A. clavatus NRRL 1 / 2.00E-23
Translation/post translation
JK747280 / Elongation factor 1 alpha / Beauveriabassiana / 2.00E-69
JK747298 / Ankyrin repeats; protein protein interaction / P.chrysogenum Wisconsin 54-1255 / 2.00E-55
JK747321 / 60S ribosomal protein L11 / A. flavus NRRL3357 / 1.00E-30
JK747332 / Hypothetical protein AN5996.2 / A. nidulans FGSC A4 / 6.00E-30
JK747293 / Conserved hypothetical protein, Protein tyrosine phosphatases (PTP) / A. terreus NIH2624 / 2.00E-110
JK747334 / Predicted O-linked N-acetylglucosaminetransferase / P.chrysogenum Wisconsin 54-1255 / 1.00E-25
JK747335 / Serine/threonine protein phosphatase 2A / P.chrysogenum Wisconsin 54-1255 / 1.00E-62
JK747360 / Uncultured bacterium clone GAS19 16S ribosomal RNA gene / 4.00E-09
JK747361 / Metallophosphatasesuperfamily, metallophosphatase / P.chrysogenum Wisconsin 54-1255 / 1.00E-68
JK747362 / Protein tyrosine phosphatases (PTP) / A. terreus NIH2624 / 2.00E-70
JK747363 / Translation elongation factor-1 alpha / EuP.limosum / 2.00E-49
JK747372 / Ribosomal protein S13/S18 / P.chrysogenum Wisconsin 54-1255 / 1.00E-35
JK747386 / 60S ribosomal protein L24a / A. fumigatus Af293 / 5.00E-05
JK747388 / Phosphoenolpyruvatemutase (PEPM) / P.chrysogenum Wisconsin 54-1255 / 4.00E-123
Housekeeping/cell development
JK747255 / Act gene, partial sequence / P.decumbens strain 114-2 / 3.00E-33
JK747302 / Protein ecm33 / A. niger CBS 513.88 / 4.00E-32
JK747304 / Hypothetical protein AN3310.2 / A. nidulans FGSC A4 / 1.00E-32
JK747336 / Actin-bundling protein Sac6, putative / Neosartoryafischeri NRRL 181 / 3.00E-68
JK747337 / HET-C domain protein HetC / Neosartoryafischeri NRRL 181 / 5.00E-19
JK747338 / GPI-anchored cell wall organization protein / P.chrysogenum Wisconsin 54-1255 / 1.00E-46
JK747339 / Hypothetical protein, Cyclin box fold / Paramecium tetraurelia strain d4-2 / 7.80E-02
JK747430 / Export control protein CHS7-like, putative / P.marneffei ATCC 18224 / 6.00E-04
JK747389 / 30S ribosomal protein S19P / P.chrysogenum Wisconsin 54-1256 / 2.00E-89
JK747390 / Hypothetical protein AN5996.2 / A. nidulans FGSC A4 / 6.00E-21
Cell cycle & DNA processing
JK747251 / Histone H4, mRNA / A. niger CBS 513.88 / 4.00E-43
JK747258 / RPEL repeat (DNA binding repeat ) / P.chrysogenum Wisconsin 54-1255 / 2.00E-56
JK747259 / Hypothetical protein Histone 2A / Tuber melanosporum Mel28 / 1.00E-53
JK747266 / Transposase / Metarhiziumanisopliae ARSEF 23 / 4.8
JK747301 / Histone 2A / Tuber melanosporum Mel28 / 2.00E-17
JK747312 / Conserved hypothetical protein, phosphoesterase / Talaromycesstipitatus ATCC 10500 / 2.00E-60
JK747391 / Recombinational DNA repair protein (RecE pathway)- / 4.20E-01
JK747392 / Histoneacetyltransferases subunit 3 / P.chrysogenum Wisconsin 54-1255 / 4.00E-10
Transporter
JK747252 / Sugar transporter / Neosartoryafischeri NRRL 181 / 1.00E-29
JK747257 / Sugar transporter / P.chrysogenum Wisconsin 54-1255 / 1.00E-87
JK747267 / OPT oligopeptide transporter protein / P.chrysogenum Wisconsin 54-1256 / 1.00E-44
JK747281 / ABC Transporter permease / Uncultured bacterium / 4.00E-08
JK747278 / Porin / Trichophytonequinum CBS 127.97 / 1.00E-31
JK747282 / Nuclear pore protein (Nic96), putative / A. flavus NRRL3357 / 1.00E-65
JK747288 / Amino acid permease / P.chrysogenum Wisconsin 54-1255 / 3.00E-23
JK747294 / Ammonium Transporter Family protein / P.chrysogenum Wisconsin 54-1256 / 2.00E-64
JK747309 / Export control protein CHS7-like, putative / Talaromycesstipitatus ATCC 10500 / 2.00E-34
JK747319 / Putative integral membrane protein / P.chrysogenum Wisconsin 54-1255 / 2.00E-33
JK747325 / PREDICTED: high mobility group protein HMG-I/HMG-Y-like / 7.70E+00
JK747340 / Multi drug resistance-associated protein / P.chrysogenum Wisconsin 54-1255 / 9.00E-105
JK747432 / Predicted protein / A. terreus NIH2624 / 8.00E-22
JK747364 / Predicted protein, Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family / A. terreus NIH2624 / 4.00E-23
JK747393 / Small oligopeptide transporter, OPT family / Talaromycesstipitatus ATCC 10500 / 2.00E-38
JK747394 / Amino acid transport and metabolism / P.chrysogenum Wisconsin 54-1255 / 4.00E-69
JK747395 / Sodium:solutesymporter family / P.chrysogenum Wisconsin 54-1255 / 5.00E-63
Protein fate
JK747285 / ATP-dependent protease La 2 / A. terreus NIH2624 / 6.00E-44
JK747315 / Peptidase M12A astacin / Trueperaradiovictrix DSM 17093 / 0.62
JK747370 / Aspergillopepsin, putative / P.marneffei ATCC 18225 / 2.00E-14
JK747406 / Gag-polpolyprotein / A. oryzae RIB40 / 4.00E-09
JK747407 / Cullin / A. niger CBS 513.88 / 7.00E-98
JK747408 / CarboxypeptidaseCpyA/Prc1, putative / A. clavatus NRRL 1 / 2.00E-71
JK747409 / Hypothetical protein ATEG_08990 / A. terreus NIH2624 / 1.00E-119
JK747410 / Proteasome component Pup3, putative / P.marneffei ATCC 18224 / 3.00E-48
JK747411 / Proteasome regulatory particle subunit / P.chrysogenum Wisconsin 54-1255 / 1.00E-102
JK747295 / Vacuolar serine protease / P.oxalicum
JK747311 / Host infection protein cap20 / P.chrysogenum Wisconsin 54-1259 / 1.00E-62
JK747296 / Aspartyl-tRNAsynthetase / Penicillium oxalicum 114-2 / 5e-13
JK747326 / Pathogenesis associated protein Cap20, putative / P.marneffei / 4.00E-05
JK747421 / Zn peptidase / Penicillium oxalicum 114-2 / 2e-128
JK747420 / Peptidase / Penicillium oxalicum 114-2 / 3e-77
Signaling/receptor
JK747260 / Opsin, putative / Neosartoryafischeri NRRL 181 / 8.00E-06
JK747262 / PREDICTED: N-formyl peptide receptor 2-like / Ornithorhynchusanatinus / 1.40E+00
JK747268 / Membrane-associating domain / P.chrysogenum Wisconsin 54-1255 / 4.00E-26
JK747271 / Hypothetical protein Plim_1456,fibrocystin-L-like protein / Planctomyceslimnophilus DSM 3776 / 4.70E-01
JK747287 / Conserved hypothetical ATP binding protein / P.chrysogenum Wisconsin 54-1255 / 4.00E-36
JK747289 / Arf1-Arf5-like subfamily / P.chrysogenum Wisconsin 54-1255 / 2.00E-92
JK747303 / Electron transfer flavoprotein alpha-subunit / Arthrodermaotae CBS / 1.00E-32
JK747320 / Src homology 3 domains / P.chrysogenum Wisconsin 54-1255 / 1.00E-09
JK747351 / WWP or rsp5 domain / P.chrysogenum Wisconsin 54-1256 / 3.00E-112
JK747352 / NACHT and WD40 domain protein / [A.niger CBS 513.88] / 4.5
JK747353 / Conserved hypothetical protein,Histidinephosphatase / P.marneffei ATCC 18224 / 1.00E-24
JK747322 / PREDICTED: LOW QUALITY PROTEIN: n-terminal EF-hand calcium-binding , / Monodelphisdomestica / 6.60E-01
JK747412 / S-adenosylmethionine-dependent methyltransferases / P.chrysogenum Wisconsin 54-1255 / 2.00E-50
JK747413 / Benzodiazepine receptor family protein / Talaromycesstipitatus ATCC / 4.70E-02
JK747414 / Conserved hypothetical protein,WD40 domain / A. terreus NIH2624 / 2.00E-08
JK747381 / Group 1 glycosyltransferase / Nostocpunctiforme PCC 73102 / 8.20E+00
JK747382 / Galactosyltransferase / P.chrysogenum Wisconsin 54-1255 / 8.00E-17
Stress/oxidative stress
JK747254 / Proteolipid membrane potential modulator / P.chrysogenum Wisconsin 54-1255 / 4.00E-50
JK747355 / DNA mismatch repair enzyme / P.chrysogenum Wisconsin 54-1255 / 7.00E-28
JK747415 / Hsp90 co-chaperone Cdc37 / P.chrysogenum Wisconsin 54-1255 / 1.00E-120
JK747416 / Molecular chaperone / Rhizoplacachrysoleuca / 2.00E-38
JK747284 / Putative peroxidase / P.chrysogenum Wisconsin 54-1259 / 5.00E-42
JK747318 / Cytochrome P450 / Leptographiumlongiclavatum / 3.00E-103
JK747350 / Hypothetical protein AN8952.2,cytochrome P450 / A. nidulans FGSC A4 / 2.00E-13
JK747265 / NADPH-dependent FMN reductase / Ajellomycescapsulatus G186AR / 4.00E-41
Energy
JK747305 / NADH dehydrogenase subunit 2 / P.solitum / 1.70E-02
JK747310 / Mitochondrial ATPase inhibitor / P.chrysogenum Wisconsin 54-1259 / 2.00E-20
JK747308 / Hypothetical protein PTT_17255 / Pyrenophorateres f. teres 0-1 / 2.00E-64
JK747354 / ATP synthase subunit beta / A. niger CBS 513.88 / 7.00E-55
JK747356 / Hypothetical protein VOLCADRAFT_91579 / Volvoxcarteri f. nagariensis / 4.30E-01
JK747417 / Cytochrome c oxidase subunit IV / P.chrysogenum Wisconsin 54-1255 / 8.00E-10
JK747418 / Oxidoreductase, short-chain dehydrogenase/reductase family / 1.00E-84
JK747419 / Dynein light chain DYN2 / A. niger CBS 513.88 / 1.00E-58
JK747327 / Cytochrome b subunit of succinatedehydrogenase, putative / Neosartoryafischeri NRRL 181 / 3.00E-14
JK747329 / Hypothetical Cytochrome c oxidase subunit IV / Penicillium oxalicum 114-2 / 4e-12
Hypothetical/unknown
JK747256 / Toxoplasmagondii ME49 hypothetical protein, mRNA / 0.024
JK747264 / Conserved hypothetical protein / P.marneffei ATCC 18224 / 4.00E-12
JK747269 / Hypothetical protein CJBH_1340 [ / Campylobacter jejuni subsp. jejuni / 2.00E-06
JK747270 / Hypothetical protein AFLA_064630 / A. flavus NRRL3357 / 1.00E-23
JK747273 / TPA: conserved hypothetical protein / A. nidulans FGSC A4 / 4.00E-07
JK747274 / Hypothetical protein / P.chrysogenum Wisconsin 54-1255 / 0.16
JK747275 / Putative phosphoinositide binding site / P.chrysogenum Wisconsin 54-1256 / 4.00E-54
JK747277 / Pc21g01830 / P.chrysogenum Wisconsin 54-1257 / 7.00E-09
JK747283 / Pc13g15670 / P.chrysogenum Wisconsin 54-1258 / 2.00E-05
JK747423 / Hypothetical protein AFUA_2G16190 / A. fumigatus Af293 / 7.00E-04
JK747333 / Conserved hypothetical protein / A. terreus NIH2624 / 2.00E-19
JK747422 / No significant similarity found / 6.00E-08
JK747424 / No significant similarity found
JK747290 / conserved hypothetical protein / P.marneffei ATCC 18224 / 1.40E-01
JK747291 / No significant similarity found
JK747292 / No significant similarity found
JK747426 / No significant similarity found
JK747371 / No significant similarity found
JK747427 / Hypothetical protein SORBIDRAFT_06g032145 / Sorghum bicolor / 1.40E+00
JK747307 / No significant similarity found
JK747428 / Hypothetical protein [Pseudomonas phage PhiPA3] / 8.4
JK747317 / Hypothetical protein SULAZ_0908 / Sulfurihydrogenibiumazorense / 2.00E-10
JK747431 / Hypothetical protein / Actinobacillus minor / 7.0
JK747324 / Hypothetical protein / P.chrysogenum Wisconsin 54-1256 / 8.00E-26
JK747342 / No significant similarity found
JK747343 / Hypothetical protein / P.chrysogenum Wisconsin 54-1255 / 1.00E-40
JK747344 / Hypothetical protein pFi_043 / Rhodococcusfascians D188 / 4.40E+00
JK747345 / Hypothetical protein / P.chrysogenum Wisconsin 54-1255 / 2.00E-11
JK747346 / BYS1 domain protein, putative / A. fumigatus A1163 / 2.00E-41
JK747347 / Hypothetical protein LOC539906,TMPIT-like protein / Bostaurus / 0.73
JK747348 / Hypothetical protein ATEG_01502 / A. terreus NIH2624 / 2.00E-28
JK747349 / No significant similarity found
JK747365 / Clone wlsu2.pk0001.h3:fis, full insert mRNA sequence / 2.00E-06
JK747366 / Xenopustropicalis finished cDNA, clone TNeu095o23 / 3.90E-01
JK747341 / Yersiniaenterocolitica partial cryptic plasmid p29930 / 0.2
JK747367 / Xanthomonascampestrispv. campestris str. 8004, complete genome / 1
JK747368 / P.chrysogenum Wisconsin 54-1255 / 5.6
JK747369 / Hypothetical protein AOR_1_476014 / A. oryzae RIB40 / 1.00E-29
JK747396 / Pc12g01940 / P.chrysogenum Wisconsin 54-1255 / 2.00E-19
JK747397 / Hypothetical protein PGTG_11207 [Pucciniagraminis f. sp. tritici / 1.20E+00
JK747386 / Methylococcuscapsulatus str. Bath, complete genome / 9.30E-02
JK747398 / No significant similarity found
JK747399 / Pc18g04500 / P.chrysogenum Wisconsin 54-1255 / 3.00E-13
JK747400 / Hypothetical protein SERLA73DRAFT_72589 [Serpulalacrymansvar / 1.1
JK747401 / No significant similarity found
JK747402 / GTP-binding nuclear protein Ran, putative / P.marneffei ATCC / 7.00E-74
JK747403 / Hypothetical protein NFIA_008740 / Neosartoryafischeri NRRL 181 / 1.00E-27
JK747404 / Hypothetical protein TERG_08793 / Trichophytonrubrum CBS 118892 / 2.00E-03
JK747405 / Hypothetical protein CAEBREN_11017 / Caenorhabditisbrenneri / 9.2
JK747297 / Hypothetical protein AN0731.2 / A. nidulans FGSC A4 / 4.00E-32
JK747300 / Hypothetical protein VDAG_04548 / Verticilliumdahliae VdLs.17 / 9.30E-01