Supplementaltable 1 Unknown Unigenes (E-Value > 1E-3) in Comune Or Monreal Unpollinated

SupplementalTable 1 Unknown unigenes (e-value > 1e-3) in ‘Comune’ or ‘Monreal’ unpollinated and self-pollinated styles and stigmas which matched plant ESTs or citrus genomic sequences. C0, TDFs isolated from ‘Comune’ unpollinated styles with stigmas; M0, TDFs isolated from ‘Monreal’ unpollinated pistils; C4, TDFs isolated from ‘Comune’ pistils four days after pollination; M4, TDFs isolated from ‘Monreal’ styles and stigmas four days after pollination.

Unigene / TDF isolated from / Description / Max score / Total score / Query coverage / E value / Max ident / BLASTX search ( e-value<1e-3)
U_9 / C4 / gb|CX069388.1| UCRCS08_10B06_b Parent Washington Navel Orange Callus cDNA LibraryUCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10B06-C12-1-5.b, mRNA sequence. / 62.6 / 62.6 / 96% / 5,00E-07 / 86% / gag-pol precursor
U_12 / M4 / gb|CV715336.1| UniGene info UCRCS08_0005J19_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0005J19, mRNA sequence. / 300 / 300 / 45% / 1,00E-78 / 93% / no hits found
U_15 / C4 / gb|EY779021.1| CR05-C1-103-051-G10-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence. / 197 / 197 / 100% / 1,00E-47 / 98% / ref|NP_001118676.1| TIC (TIME FOR COFFEE) [Arabidopsis thaliana]
U_19 / M4 / gb|DY268122.1| IC0AAA23BD01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. / 223 / 223 / 90% / 3,00E-55 / 100% / Cytochrome P450 77A3 gb|AAB94593.1| CYP77A3p [Glycine max]
U_25 / C4 / dbj|DC899287.1| DC899287 STG Citrus unshiu cDNA clone STG2_0264 5', mRNA sequence. / 228 / 228 / 100% / 6,00E-57 / 98% / gb|ABH09326.1| putative aquaporin [Vitis vinifera]
U_27 / M4 / gb|CV713560.1| UCRCS08_0002P21_r Parent Washington Navel Orange Callus Cdna Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002P21,mRNA sequence. / 311 / 311 / 98% / 7,00E-82 / 94% / no hits found
U_35 / C4 / gb|CX637645.1| UCRPT02_28G01_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Poncirus trifoliata cDNA clone UCRPT02-28G01-N1-1-5.g, mRNA sequence. / 197 / 197 / 97% / 1,00E-47 / 86% / gb|AAO67368.1| polyprotein 1 [Petunia vein clearing virus]
U_38 / C4 / gb|CX070211.1| UCRCS08_15E01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15E01-J1-1-5.b, mRNA sequence. / 138 / 138 / 100% / 9,00E-30 / 100% / gb|AAG51910.1|AC013258_4 germin-like protein; 90801-91484 [Arabidopsis thaliana]
U_45 / C4 / dbj|DB902636.1| DB902636 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus nigra cDNA clone PnFL2-055_D06 3', mRNA sequence. / 42.8 / 42.8 / 69% / 0.51 / 82% / no hits found
U_49 / C4 / gb|EY766663.1| CR05-C1-102-001-F08-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence. / 55.4 / 55.4 / 93% / 8,00E-05 / 100% / no hits found
U_52 / C4 / gb|EY877198.1| CL06-C4-501-060-G10-CT.F Rangpur lime root, plant with hydric stress Citrus x limonia cDNA, mRNA sequence. / 212 / 212 / 82% / 5,00E-52 / 97% / gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
U_64 / M4 / gi|166249112|gb|ET106480.1|ET106480QM0AAC12CH05RM1 CCH3 Citrus clementina genomic clone CCH3017P09, DNA sequence / 237 / 237 / 79% / 5,00E-60 / 94% / gb|AAP21414.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
U_65 / M4 / gb|EY804079.1| CR05-C3-702-044-E03-CT.F Mandarin fruit, development stadium (3 of 3) Citrus reticulata cDNA, mRNA sequence. / 60.8 / 60.8 / 73% / 2,00E-06 / 68% / no hits found
U_69 / C4 / gb|CK665729.1| USDA-FP_4205 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE23G08 5', mRNA sequence. / 250 / 250 / 98% / 2,00E-63 / 97% / ref|NP_565102.1| RRA2 (REDUCED RESIDUAL ARABINOSE 2) [Arabidopsis thaliana]
U_72 / M4 / gi|110391939|gb|EC957000.1|EC957000 WIN061.C21_G11 Cab Sauv seed normalized (WIN06) Vitis vinifera cDNA clone WIN061_G11 3', mRNA sequence / 62.6 / 62.6 / 37% / 3,00E-07 / 89% / ref|NP_178636.1| xanthine/uracil permease family protein [Arabidopsis thaliana]
U_75 / M4 / gi|166304853|gb|ET080977.1|ET080977 QM0AAC1CB11FM1 CCH3 Citrus clementina genomic clone CCH3005D21, DNA sequence / 228 / 228 / 95% / 7,00E-60 / 90% / no hits found
U_82 / M4 / gb|EY740811.1| UniGene info CS00-C3-705-077-C07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence. / 289 / 289 / 82% / 2,00E-75 / 90% / no hits found
U_87 / M4 / gb|EY721990.1| CS00-C3-703-030-E08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence. / 199 / 199 / 100% / 3,00E-48 / 97% / ref|NP_199801.2| catalytic [Arabidopsis thaliana] GDE_C; similar to Amylo-alpha-1,6-glucosidase
U_92 / M4 / gi|24461847|gb|AF506028.1| Poncirus trifoliata citrus tristeza virus resistance gene locus, complete sequence / 208 / 208 / 100% / 4,00E-51 / 96% / No hits found
U_93 / C4 / gb|EX445998.1| Volcani_7_14_D1 Volcani07 Citrus reticulata x Citrus temple cDNA, mRNA sequence. / 315 / 315 / 90% / 5,00E-83 / 93% / ref|NP_193695.2| UniGene infoGene info CYCT1;4; cyclin-dependent protein kinase [Arabidopsis thaliana]
U_102 / C0 / gi|166328314|gb|ET077798.1|ET077798 QM0AAB5CH08RM1 CCER1 Citrus clementina genomic clone CCER1045P15, DNA sequence / 585 / 585 / 100% / 4,00E-167 / 98% / dbj|BAC79783.2| putative pre-rRNA processing protein RRP5 [Oryza sativa Japonica Group]
U_103 / C0 / gb|CX642983.1| UCRPT02_64C03_b Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Poncirus trifoliata cDNA clone UCRPT02-64C03-F5-1-5.b mRNA sequence. / 91.5 / 157 / 83% / 1,00E-15 / 90% / no hits found
U_109 / MO / gi|38036868|gb|CF833910.1|CF833910 UCRCS02_04I03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04I03, mRNA sequence / 136 / 136 / 97% / 3,00E-29 / 100% / dbj|BAG68575.1| arginine decarboxylase [Prunus persica]
U_110 / MO / gi|110843904|gb|DY265127.1|DY265127 IC0AAA16BG07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence / 152 / 152 / 68% / 4,00E-34 / 74% / GTP-binding family protein [Arabidopsis thaliana]
U_111 / C0 / >gi|166316407|gb|ET074145.1|ET074145 QM0AAA9BG04FM1 CCL1 Citrus clementina genomic clone CCL009M08, DNA sequence / 152 / 152 / 100% / 2,00E-37 / 98% / no hits found
U_115 / C0 / gi|209936322|gb|DC896232.1|DC896232 DC896232 PCC Citrus unshiu cDNA clone PCC0836 5', mRNA sequence / 410 / 410 / 86% / 9,00E-112 / 93% / dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
U_122 / M0 / gi|166322534|gb|ET081374.1|ET081374 QM0AAC2AD11RM1 CCH3 Citrus clementina genomic clone CCH3015G21, DNA sequence / 302 / 302 / 86% / 7,00E-82 / 84% / no hits found
U_124 / M0 / gi|166283337|gb|ET090571.1|ET090571 QM0AAA15CD03RM1 CCL1 Citrus clementina genomic clone CCL019H05, DNA sequence / 41.0 / 41.0 / 88% / 1.01 / 72% / dbj|BAD18985.1| GAG-POL precursor [Vitis vinifera]