CA2 / Fleetwood* / AY421760
CA3 / Olson* / AY421761
CA4 / High Point* / AY421762
CA5 / Swartz* / AY421763
CA6 / Gdula* / AY421764
CA7 / Parker* / AY421765
CA8 / Donovan* / AY421766
CA10 / Kowalik* / AY421767
CA12 / Texas-12* / AY421768
CA14 / G-14* / AY421769
CA16 / G-10* / U05876
EV71 / BrCr* / A / U22521
EV71 / 2609-AUS-74 / B1 / AF135886
EV71 / MS/7423/87* / B2 / U22522
EV71 / EV71/SAR/SHA66* / B3 / AM396586
EV71 / EV71/SAR/SHA63* / B3 / AM396588
EV71 / 7673-CT-87 / B3 / AF009535
EV71 / EV71/9/97/SHA89* / B4 / AJ586873
EV71 / UH1/PM/1997* / B4 / AM396587
EV71 / 5666/sin/002209* / B4 / AF352027
EV71 / SB11977-SAR-03 / B4 / AY905549
EV71 / N5101-TW98 / B4 / AY055174
EV71 / N2443-TW02 / B4 / EU131733
EV71 / 962-Yamagata-00 / B4 / AB213623
EV71 / H0148-TW00 / B4 / AY055183
EV71 / M0177-TW00 / B4 / AY055185
EV71 / N1643-TW00 / B4 / AY055177
EV71 / SB0635/SAR/00 / B4 / AF376069
EV71 / SB11977-SAR-03 / B4 / AY905549
EV71 / N2838-TW-03 / B5 / DQ008993
EV71 / 2716-Yamagata-03 / B5 / AB177816
EV71 / SB10712-SAR-03 / B5 / AY905550
EV71 / S19841-SAR-03 / B5 / DQ341363
Supplemental table 1. EV71 reference strains and human enterovirus A prototype strains obtained from GenBank database for phylogenetic and Bootscan analyses.
Supplemental table 1. (Continued)
EV71 / 5511/SIN/00 / B5 / AF376121
EV71 / 804/NO/03* / C1 / DQ452074
EV71 / 1M-AUS-12-00 / C1 / DQ341361
EV71 / SB9465-SAR-03 / C1 / AY794036
EV71 / 0926-OR-91 / C1 / AF009548
EV71 / 1245a-tw-98* / C2 / AF176044
EV71 / N4643-TW98* / C2 / AF304458
EV71 / N6092-TW98* / C2 / AF304459
EV71 / N5746-TW98* / C2 / AF304457
EV71 / H0139-TW98 / C2 / AY055193
EV71 / Tainan/6092/98 / C2 / AF304459
EV71 / 2916-TAI-98 / C2 / AF286526
EV71 / H0358-TW98 / C2 / AY055195
EV71 / Tainan/5746/98 / C2 / AF304457
EV71 / N5811-TW98 / C2 / AY055199
EV71 / H0001-TW98 / C2 / AY055191
EV71 / ENT/PM/SHA71* / C2 / AM396585
EV71 / ENT/PM/SHA52* / C2 / AM396584
EV71 / 6F/AUS/6/99* / C2 / DQ381846
EV71 / 671-Yamagata-98 / C2 / AB213614
EV71 / 2M/AUS/3/99 / C2 / AF376103
EV71 / 1585-Yamagata-01 / C2 / AB177812
EV71 / N6356-TW98 / C2 / AY055197
EV71 / KOR-EV71-10 / C3 / AY125974
EV71 / SHZH98* / C4 / AF302996
EV71 / N3340-TW02* / C4 / EU131776
EV71 / 984* / C4 / DQ133458
EV71 / 1235* / C4 / DQ133459
EV71 / SHZH03* / C4 / AY465356
EV71 / 2779-Yamagata-02 / C4 / AB213629
EV71 / N6500-TW98† / C2 / FJ357343
EV71 / N1859-TW05† / C5 / FJ357344
EV71 / N1757-TW05† / C4 / FJ357345
EV71 / N2413-TW04† / C4 / FJ357346
EV71 / N2947-TW04† / C4 / FJ357347
Supplemental table 1. (Continued)
EV71 / N0610-TW08† / B5 / FJ357353
EV71 / N2873-TW05† / C4 / FJ357348
EV71 / N1655-TW05† / C4 / FJ357349
EV71 / N0775-TW07† / C4 / FJ357350
EV71 / M0496-TW08† / B5 / FJ357351
EV71 / N1745-TW08† / B5 / FJ357352
EV71 / M0448-TW08† / B5 / FJ357354
EV71 / M0084-TW08† / B5 / FJ357355
EV71 / N0692-TW08† / B5 / FJ357356
EV71 / N0623-TW08† / B5 / FJ357357
EV71 / M0314-TW08† / B5 / FJ357358
EV71 / N0561-TW08† / B5 / FJ357359
EV71 / N1324-TW08† / B5 / FJ357360
EV71 / N2776-TW03† / B5 / FJ357362
EV71 / S0004-TW03† / B4 / FJ357363
EV71 / S0044-TW03† / B4 / FJ357364
EV71 / S0318-TW01† / B4 / FJ357365
EV71 / S0151-TW02† / B4 / FJ357366
EV71 / H0009-TW03† / B4 / FJ357367
EV71 / N1796-TW99† / B4 / FJ357368
EV71 / S0584-TW04*† / C4 / FJ357373
EV71 / N2121-TW05*† / C4 / FJ357374
EV71 / N7008-TW99*† / B4 / FJ357375
EV71 / S0318-TW01*† / B4 / FJ357376
EV71 / S0296-TW00*† / B4 / FJ357377
EV71 / N2838-TW03*† / B5 / FJ357378
EV71 / 236-TW86*† / B1 / FJ357379
EV71 / 237-TW86*† / B1 / FJ357380
EV71 / 244-TW86*† / B1 / FJ357381
EV71 / 238-TW86*† / B1 / FJ357382
EV71 / 252-TW86*† / B1 / FJ357383
EV71 / 266-TW86*† / B1 / FJ357384
EV71 / M0380-TW08*† / B5 / FJ357385
* Sequences analyzed in Bootscan analysis.
† New sequences analyzed in this study.