Online Resource 1

Journal: Immunologic Research

Enhanced expression of trim14 gene suppressed Sindbis virus reproduction and modulated the transcription of a large number of genes of innate immunity.

Nenasheva V.V., Kovaleva G. V., Uryvaev L. V., Ionova K.S., Dedova A.V., Vorkunova G.K., Chernyshenko S.V., Khaidarova N. V., Tarantul V. Z.


Table. Primer related information.

Gene symbol / Primer sequences (forward/reverse) / Annealing
temperature (C)
18s RNA / F: CGGCTACCACATCCAAGGAA R: GCTGGAATTACCGCGGCT / 60
akt / F: GGACCAACGTGAGGCTCCCC R: GCCACAGTCTGGATGGCGGT / 65
aml / F: GACAGCCCCAACTTCC R: CCACTTCGACCGACAA / 60
c-fos / F: AGACCATGACAGGAGGCCGA R: GGGATCTTGCAGGCAGGTCG / 66
c-jun / F: CCGTCCGAGAGCGGACCTTA R: TGATGTGCCCGTTGCTGGAC / 63
c-myb / F: AGCTACTGCCTGGACGAACTGA R: AGCACCTGCTGTCCTTTTAGCTC / 60
c-myc / F: CGCCTCAGAGTGCATCGACC R: TGGGCTGTGAGGAGGTTTGC / 60
erk1 / F: GTCAGACTCCAAAGCCCTTGA R: CGTGCTGTCTCCTGGAAGATG / 63
erk2 / F: TCAGCTAACGTTCTGCACCG R: GGACTTGGTGTAGCCCTTGG / 60
gata1 / F: CTCCCAAGCTTCGTGGAACT R: CCGTTTACTGACAATCAGGCG / 60
grb2 / F: TGGTTTTTTGGCAAAATCCCCAGA R: GACGTTCCGGTTCACGGGGGTGAC / 60
grb3-3 / F: AAACCACATCCGTTTGGAAACGAT R: GACGTTCCGGTTCACGGGGGTGAC / 60
ifnα / F: CCTGATGAATGCGGACTCCA R: TAGCAGGGGTGAGAGTCTTTG / 63
ifnβ1 / F: AGAAGGAGGACGCCGCATTG R: CCACTCTGACTATGGTCCAGGC / 63
ifnγ / F: ACTAGGCAGCCAACCTAAGC R: TTGGAAGCACCAGGCATGAA / 63
il-17a / F: CCCCGGACTGTGATGGTCAAC R: CTGCGCAGGACCAGGATCTC / 60
il-17rb / F: GAATTTCACCTCACCAGGCTGC R: TGGAGTCAGCTGCACCGTAG / 63
il-6 / F: GAACTCCTTCTCCACAAGCG R: GAGATGCCGTCGAGGATGTA / 63
irf1 / F: CCAAATCCCGGGGCTCATCT R: ATCCGGTACACTCGCACAGC / 63
irf2 / F: GGTCTACCGAATGCTGCCCC R: TGTCCAGATGGGACTGTCCTACA / 63
irf3 / F: ACCAGCCGTGGACCAAGAG R: TACCAAGGCCCTGAGGCAC / 63
irf7 / F: GCACGTTCCTATACGGCCCC R: GGGTGTCACAGTTCCGAGGC / 63
irf9 / F: TCAGTTGCTGCCACCAGGAAT R: GCGCCCGTTGTAGATGAAGG / 63
isg15 / F: ATGTCGGTGTCAGAGCTGAAG R: GTTATTCCTCACCAGGATGCTC / 60
isg56 / F: GCTGAAGTGTGGAGGAAAGA R: AGCAAAGAAAATGGCTTGTG / 60
jak1 / F: TTGCGGCAAGAAGGAAGCGA R: GCTGGCAGCAGCGTTTTAGC / 63
jak2 / F: TGCTCAGTGGCGGCATGATT R: GGCAGTGGCTTTGCATTGGC / 60
junB / F: AGCTACGGGATACGGCCGGG R: ACTGTCCCGGGGGTGTAGGC / 60
mek2 / F: CATTACTCGGTGCAGTCGGA R: TAGGAGGTGGCTCGTTCACA / 66
nf-κB1 / F: TTTTCGACTACGCGGTGACA R: GTTACCCAAGCGGTCCAGAA / 60
nf-κB2 / F: GCGTTGTCAACCTCACCAAC R: CCGCCAGGTGTACTGGATAC / 60
pu.1 / F: CAGCGGCAGGCCCTTCGATA R: GGCACCAGGTCTTCTGATGGCT / 60
raf-1 / F: GCGCAAAACACGGCATGTGA R: CTCTGGGGCCATCCAGAGGA / 66
relA / F: AGCGTGGGGACTACGACCTG R: TTGCGAAAAGGAGCCTCGGG / 60
relB / F: GCCGTTTCCAGGAGCACAGATG R: GCGCTGGGGACACTAGTCGG / 66
srebp1 / F: GGCGCAGATCGCGGAGCCAT R: AGGGGAGAAAGCGGGCATGGA / 60
stat1 / F: AGCTTCTTGGTCCTAACGC R: TGAATGTGATGGCCCCTTCC / 63
stat2 / F: CCCAGCAGCAAAAAGCCTGC R: AGGATGAGGGGTCGATGGGG / 63
stat3 / F: GTCGCAGCCGAGGGAACAA R: TGGCCGCATATGCCCAATCTT / 60
ticam2 / F: AGGGAGCTCAGAGCGTGGAA R: GGATTGTTCAGGGGCCGCAT / 63
traf3 / F: ATCGCGCTGCAGGTTTCCTT R: CGCTCTTGTCCACGCTCTCC / 63
traf3ip2 / F: TGGAGCGCTACCTTAGGGATAAGA R: CCCCGTGGAGGAGCCACATA / 63
trif / F: CAGAGCCAACACCTGGACGG R: CAAAGGGCATTCGAGCCCCA / 63
trim14 / F:GCAGCAGCACATTGACAACA R:TCCACGAGGCCCTTAAAGAA / 60
tyk2 / F: CCCCGTGTTCTGGTATGCCC R: AGCCTCTCCCCTCGTTCCAG / 63