Supplementary Table 4. Genes downregulated by miR-hes-3/miR-373 at a p-val<0.001 at both 12 and 24 hr. The fold decreases at 12 hr and 24 hr and the p-values for these changes are noted. Hexamers: number of matches to AGCACU within the annotated 3' UTR.

Gene
Symbol / 12 hr
P-value / 12 hr
Change / 24 hr
P-value / 24 hr
Change / Transcript / Hexamers /
RPIA / 8.20E-13 / -2.6 / 5.30E-09 / -2 / NM_144563 / 1
ZHX1 / 2.50E-12 / -2.4 / 1.70E-16 / -2.7 / NM_007222 / 1
MGC29898 / 4.00E-12 / -3 / 6.90E-20 / -3.9 / NM_145048 / 1
TTC8 / 5.70E-11 / -2.6 / 3.70E-07 / -1.8 / NM_144596 / 1
ADAM9 / 1.10E-10 / -3.4 / 1.00E-13 / -4.5 / NM_003816 / 3
EG1 / 2.00E-10 / -2 / 2.50E-06 / -1.8 / NM_025205 / 0
LOC93081 / 1.10E-09 / -2 / 6.60E-13 / -2.7 / NM_138779 / 1
AOF1 / 4.40E-09 / -2.4 / 1.60E-10 / -2.5 / NA
MICA / 6.00E-09 / -2.2 / 3.50E-13 / -2.6 / NM_000247 / 2
KIAA1194 / 6.50E-09 / -2 / 2.70E-10 / -2.3 / NM_015455 / 5
NEDD5 / 1.10E-08 / -2.1 / 8.50E-12 / -2.7 / NM_004404 / 2
C9orf78 / 1.60E-08 / -1.8 / 2.30E-12 / -2.4 / NM_016482 / 2
FLJ25555 / 1.80E-08 / -1.9 / 8.40E-05 / -1.8 / NM_152345 / 1
FLJ34236 / 2.10E-08 / -2 / 8.10E-09 / -2.1 / NA
SLC25A23 / 3.00E-08 / -1.9 / 6.70E-09 / -2.3 / NM_024103 / 0
KIAA1919 / 6.50E-08 / -1.8 / 1.40E-07 / -2.3 / NM_153369 / 0
HSPA14 / 1.00E-07 / -1.9 / 6.10E-06 / -2 / NM_016299 / 0
ZNF226 / 1.50E-07 / -2 / 8.90E-07 / -1.9 / NM_016444 / NA
STK4 / 2.00E-07 / -2 / 2.80E-06 / -1.8 / NM_006282 / 1
TMEM14A / 2.10E-07 / -2.3 / 7.30E-14 / -4.1 / NM_014051 / 2
LOC149420 / 2.40E-07 / -1.8 / 6.60E-08 / -2 / NM_152835 / 3
TFAP4 / 2.80E-07 / -1.7 / 1.70E-10 / -2.1 / NM_003223 / 1
TBC1D2 / 7.40E-07 / -1.9 / 1.60E-13 / -2.5 / NM_018421 / 2
C11orf15 / 7.70E-07 / -1.7 / 3.80E-10 / -2 / NM_020644 / 1
NIN / 1.40E-06 / -1.8 / 1.60E-08 / -2.2 / NM_016350 / 0
USP12 / 1.80E-06 / -1.7 / 3.20E-07 / -1.9 / AF022789 / 1
BAZ1A / 2.20E-06 / -1.8 / 6.20E-08 / -2 / NM_013448 / 1
PRC1 / 2.30E-06 / -2 / 4.10E-10 / -2.6 / NM_003981 / 1
RELA / 2.70E-06 / -1.8 / 1.20E-07 / -1.9 / NM_021975 / 4
GLTP / 4.10E-06 / -1.8 / 4.60E-12 / -2.7 / NM_016433 / 1
INSIG2 / 8.20E-06 / -1.7 / 5.30E-06 / -1.9 / NM_016133 / 0
TUSC2 / 1.20E-05 / -1.7 / 1.40E-04 / -1.6 / NM_007275 / 2
CDK11 / 1.80E-05 / -1.6 / 3.00E-10 / -2.2 / NM_015076 / 1
CFL2 / 2.00E-05 / -1.7 / 1.60E-07 / -2 / NM_021914 / 2
CENPF / 2.10E-05 / -1.8 / 8.60E-08 / -2.1 / NM_016343 / 2
GPSM2 / 2.30E-05 / -1.7 / 6.00E-11 / -2.8 / NM_013296 / 1
C20orf142 / 3.40E-05 / -1.6 / 4.70E-09 / -2.2 / NA
STX11 / 3.70E-05 / -1.8 / 5.80E-06 / -2.2 / NM_003764 / 0
TNFAIP1 / 4.40E-05 / -1.6 / 6.00E-06 / -1.7 / NM_021137 / 4
RNF149 / 4.90E-05 / -1.7 / 3.50E-08 / -2 / NM_173647 / 1
MGC17943 / 5.10E-05 / -1.7 / 1.00E-07 / -2.2 / NM_152261 / 2
NCB5OR / 5.90E-05 / -1.6 / 2.70E-11 / -2.6 / NM_016230 / 1
GBP3 / 7.30E-05 / -1.6 / 6.00E-09 / -2.3 / NM_018284 / 0
CD83 / 1.00E-04 / -1.5 / 3.90E-05 / -1.7 / NM_004233 / 1
FYCO1 / 1.30E-04 / -1.8 / 3.50E-05 / -1.9 / NM_024513 / 5
TOPK / 1.40E-04 / -1.7 / 4.20E-10 / -2.3 / NM_018492 / 2
CKLFSF4 / 1.50E-04 / -1.5 / 1.30E-04 / -1.5 / NM_178818 / 1
ARHGEF3 / 1.50E-04 / -1.6 / 3.90E-07 / -1.8 / NM_019555 / 3
MKRN1 / 1.60E-04 / -1.6 / 2.40E-04 / -1.6 / NM_013446 / 1
LMNB1 / 1.80E-04 / -1.5 / 3.80E-05 / -1.7 / NM_005573 / 1
LUC7L2 / 2.10E-04 / -1.6 / 1.40E-05 / -1.8 / NM_016019 / 1
HERPUD1 / 2.30E-04 / -1.5 / 4.50E-07 / -1.8 / NM_014685 / 1
VPS26 / 2.30E-04 / -1.6 / 9.50E-05 / -1.8 / NM_004896 / 1
KLHL12 / 3.20E-04 / -1.5 / 2.10E-06 / -1.7 / NM_021633 / 2
MYBL1 / 3.50E-04 / -1.7 / 1.50E-05 / -2 / XM_034274 / 0
NUPL1 / 3.60E-04 / -1.5 / 7.40E-05 / -1.6 / NM_014778 / 3
LOC51035 / 4.90E-04 / -1.7 / 4.90E-08 / -1.9 / NM_015853 / 1
KIAA1399 / 5.00E-04 / -1.5 / 3.00E-06 / -1.8 / AB037820 / 1
CD24 / 5.10E-04 / -1.7 / 1.70E-05 / -2.4 / NM_013230 / 1
PHC2 / 6.70E-04 / -1.4 / 4.10E-05 / -1.6 / NM_004427 / 1
RNF159 / 7.80E-04 / -1.5 / 2.70E-04 / -1.6 / NM_032373 / 1
C2orf18 / 8.10E-04 / -1.4 / 1.20E-05 / -1.7 / NM_017877 / 1
C5orf5 / 8.20E-04 / -1.5 / 4.90E-10 / -2.1 / NM_016603 / 2
GBAS / 8.80E-04 / -1.6 / 5.00E-05 / -1.9 / NM_001483 / 1
KIF23 / 9.00E-04 / -1.4 / 5.30E-05 / -1.6 / NM_138555 / 1