1
Table ESM 1: Details of the primer pairs for developed EST-SSR markers with the SSR motif, primer sequences, product size and a putative function (The marker names are highlighted in yellow, which should be referred when used in any publication along with the manuscript citation)
SSR no. / 1Sequence/ consensus ID / CCMB-EST-clone ID / 2DesignedGenBank Acc. No. for CCMB ESTs / SSR motif / Designated microsat marker ID / Forward Primer (5'-3') / Reverse Primer (5'-3') / Expected product size (bp) / BLASTX results
Putative function E-value Score
1 / BQ448729 / DCM06 / (T)10(TTC)5* / DCM06 / GTAGTCGGTGGGCTTGTGTT / AACGCGGACTAATTGAGGAA / 210 / No significant homology / - / -
2 / BQ448740 / (CT)5 / DCM10 / CCGCGCTTTATCATCAGATT / AATGGGAGGAGCTGGATCTT / 222 / No significant homology / - / -
3 / BQ448743 / (GA)4 / DCM11 / ACGGTGGATGATGGAGTTTC / GCAGGGCAGTGTAATTGTTG / 272 / WRKY transcription factor 31 [Arabidopsis thaliana] / 2E-13 / 53
4 / BQ448744 / (TG)4 / DCM12 / GCTGGTTTTGCGTAATGGTT / CCGACCACAGCACATCATAC / 219 / No significant homology / - / -
5 / BQ448752 / DCM02 / (GAG)6 / DCM02 / GCGGGGAGAGCAGTGAAG / TCTTCAGCCTTCCTCCTTGA / 154 / No significant homology / - / -
6 / BQ448755 / (GA)5 / DCM13 / GACTAAAAGCTCCCCCTGCT / GGTCCTCGAACATCCCATAA / 211 / No significant homology / - / -
7 / BQ448756 / (CA)4 / DCM14 / AGTAACCACCAACCCACCAA / GGTGGTTGTCGATTCTGTGTT / 212 / No significant homology / - / -
8 / BQ448758 / DCM03 / (ACG)4n(ATG)6 / DCM03 / TATGTGACGACGTGGGGATA / GTCATCCTCGTCGATCATCC / 234 / malate dehydrogenase [Escherichia coli] / 2.00E-30 / 111
9 / BQ448759 / (AG)4 / DCM15 / TTCTTAACCTCATGGCGAGC / ATGTCGAGGTTGCTGGAGAC / 208 / No significant homology / - / -
10 / BQ448778 / DCM07 / (TC)8 / DCM07 / ttggctccatggattttgat / TGATTAGCGCAGGTTCACAG / 149 / No significant homology / - / -
11 / BQ448779 / (ACG)4 / DCM16 / TACGGTTCACGCAACGACTA / GTTCGTCGTCGACTTGGTG / 275 / No significant homology / - / -
12 / BQ448813 / (TG)4 / DCM17 / CTGCATGCATCTTGTCGAGT / CGTTCATAATCTTCACCACCG / 146 / No significant homology / - / -
13 / BQ448818 / (GGC)4 / DCM18 / TTTACCGGTGTGGCCATAAT / TCTGGTGGTAGTAGGGTGGG / 268 / putative protein [Arabidopsis thaliana] / 8E-07 / 55
14 / BQ448827 / (AT)7 / DCM19 / GCCAGTACAACAACAAACGC / GCCTACTACAGAGGTCCCCC / 161 / squalene monooxygenase 2 [Medicago truncatula] / 1.00E-41 / 169
15 / BQ448830 / (ACT)4 / DCM20 / TTTGTAAAATCAGTGTGTGCAAAA / TTTTTCCCCTTTTTCTTGGG / 114 / putative DNAJ protein [Nicotiana tabacum] / 2E-07 / 55
16 / BQ448849 / (AT)4 / DCM21 / CCACTGTACTTTTCTTTTCTCCTC / TCCTTTCTCCGATGGTGACT / 106 / No significant homology / - / -
17 / BQ448862 / DCM09 / (TGA)5 / DCM09 / TTGCGATGATGATTGAGACC / TCGTCATAATCGTCACATCG / 194 / No significant homology / - / -
18 / BQ448868 / (TA)4 / DCM22 / AGCCAGCCGAGTGTGATATT / AACCTCCTCCACCCTCCTAA / 280 / No significant homology / - / -
19 / BQ448877 / DCM10 / (TG)4n(GTT)5n(GGT)4 / DCM10 / TTGGTGTGTTGTGTTTGGTGT / GACCACCACCATCACCATC / 199 / NONE / - / -
20 / BQ448889 / (TGT)4n(GC)4 / DCM23 / TGGAGGATGAAGAAACTGGG / GTAACGTCCGTATGAGGCCA / 258 / No significant homology / - / -
21 / BQ448897 / (TAC)5n(GA)4 / DCM24 / GAGGGAAAAAGTGTCGGCTT / AATGTTGCCTAAATCGGACG / 249 / calcium-binding protein [Olea europaea] / 1E-16 / 86
22 / BQ448912 / (AT)4 / DCM25 / AGGCAACCAGAACCAGTGAA / GCTGTTACCATAGCTGGGGA / 125 / No significant homology / - / -
23 / BQ448915 / (GA)4 / DCM26 / AGGTCCCTGTTGTTCAGGTG / GACCGCATTCTTTAGCCTTG / 264 / adenylyl-sulfate reductase [Lycopersicon esculentum] / 1.00E-69 / 262
24 / BQ448929 / DCM01 / (AG)15 / DCM01 / tttttgggaaatgaaggtgc / TGCACTTCAAGATCCCCTTT / 262 / NONE / - / -
25 / BQ448932 / (TTA)4 / DCM27 / GGTTTAAAGAATTGAACCGGAA / ATGCCTCTGGACTCCATTTG / 279 / No significant homology / - / -
26 / BQ448940 / (AC)4 / DCM28 / CAACAGTAGCAGAAGCTGGG / GGACTAATGGGTCAGCGTGT / 133 / mini-chromosome maintenance 7 [Pisum sativum] / 8E-17 / 87
27 / BQ448957 / DCM04 / (ATA)6 / DCM04 / tcaaaaacacatggaagcca / CAACAGATCAGCTTTTGCCA / 131 / NONE / - / -
28 / BQ448964 / DCM08 / (AG)7 / DCM08 / AAAGGCCATGTTAGGGAACC / aggacgtgtccagactccag / 181 / protein phpsphatase 2C (PP2C) [Fagus sylvatica] / 3E-15 / 81
29 / BQ448968 / (TTG)5 / DCM29 / CAAGGCGAGGAGGTGATG / CACAACACAACCAACAACCC / 213 / NONE / - / -
30 / BQ448977 / (AT)4 / DCM30 / CACTGGACTTTGCTTTTCTGC / AACATGGCGACAAATGTTGA / 242 / No significant homology / - / -
31 / BQ448987 / DCM05 / (CGG)6 / DCM05 / GGCATTTGAGAATAACCCCA / CGCCACCTCAGTCAACTTTT / 163 / No significant homology / - / -
32 / BQ449007 / (AC)4 / DCM31 / GGTGGAGGAGGAAGAGGAAG / GCAGAGGCAATTTCCAACAT / 147 / 60S ribosomal protein L13E [Picea abies] / 5.00E-27 / 120
33 / BQ449018 / (TC)4 / DCM32 / TCGAGGGAGATTATGTTCCG / AAATCGTTCAGCTGATTGGG / 132 / No significant homology / - / -
34 / BQ449023 / (TAA)4 / DCM33 / GCAAATCGCATGATCTGG / TGGTGACATAAATCCCTCCC / 188 / ribulose 1,5-bisphosphate carboxylase/oxygenase; rbcL [Oryza sativa var. japonica] / 8.00E-32 / 136
35 / BQ449028 / (AT)4 / DCM34 / TGTGCTTGTGCCTTTTGATT / AAGCACCAAAAACCTGGAAG / 229 / No significant homology / - / -
36 / BQ449035 / (GA)4 / DCM35 / TTCCTTCAACGGTTGGAAAC / GTTGTTTGTTCCCGGTGTTC / 115 / No significant homology / - / -
37 / BQ449052 / (AGA)6 / DCM36 / GGATCTGTCCGCGTCTTATG / CAAGTTTTTACCGCAGCCAT / 226 / No significant homology / - / -
38 / BQ449054 / (GA)4 / DCM37 / ACATTCCTTCGGTCCTCCTT / ATGGTAAGGGATGACACCCA / 244 / No significant homology / - / -
39 / BQ449056 / (CT)4 / DCM38 / TTGTCCTTTCTATCCGCTTCA / TAAGGAAAGATGGAAGGGGG / 184 / NONE / - / -
40 / BQ449056 / (TTC)4 / DCM39 / CTCCTTTCCCCCTTCCATC / AAAAAGGAGAGAGGGGACGA / 185 / NONE / - / -
41 / BQ449057 / (TC)4 / DCM40 / TCTCGTGTCTGATGCGATTC / CACGAAGACAACGCAGAGAG / 227 / putative protein [Arabidopsis thaliana] / 7E-12 / 72
42 / BQ449064 / (GA)4 / DCM41 / ATGCCCTGTACAAAGATGGC / CTTACATTTGGGAGGGTTGC / 142 / squalene epoxidase-like protein [Arabidopsis thaliana] / 8.00E-55 / 213
43 / BQ449069 / (TGA)4 / DCM42 / ATGACGCGTGTGATTGACAT / CATCGATCGTCATCGACAGT / 276 / cytochrome c-oxidase subunit 2 [Brassica napus] / 1E-09 / 64
44 / BQ449077 / (ATG)5 / DCM43 / GTTGACGTATCTCGTGAGCG / AAGGACATCGAAGACATCGC / 209 / No significant homology / - / -
45 / BQ449079 / (CT)4 / DCM44 / TTGTAGGGCCCACTACCAAG / ACTGAAGCTGGGAGTTGGAA / 113 / AT4g02350 [Arabidopsis thaliana] / 1.00E-27 / 122
46 / BQ449096 / (CA)4 / DCM46 / TTGTGCAACCAAGTACGCAT / GCAGGAGTGCTTTCTTTTGG / 165 / No significant homology / - / -
47 / BQ449104 / (ACA)4 / DCM47 / TACGGGGAGAAGAATGATGG / AAAGGAGCACCTGGGAAAAT / 178 / NONE / - / -
48 / BQ449138 / (CT)4 / DCM48 / TTAATGGGTTCAGAGGTGGG / CGCACTTTGTCAAGACTCAA / 264 / NONE / - / -
49 / BQ449139 / (AT)4 / DCM49 / GCATTCAGCATCTGCACTGT / ACAGACCCAATTCCAGCAAG / 239 / spliceosomal-like protein [Arabidopsis thaliana] / 4.00E-52 / 204
50 / BQ449141 / (TCT)5 / DCM50 / GTACAATTTGCTCAACCGGG / GACCAAGTAGCTTTGCCTCG / 121 / No significant homology / - / -
51 / BQ449143 / (GGC)4n(CATTGC)4 / DCM51 / TTTGACGTGTAGGAGTTGCG / GGATCTGGTGGTAGGAGGGT / 177 / putative protein [Arabidopsis thaliana] / 6.00E-24 / 110
52 / BQ449148 / (TGG)4 / DCM52 / CGGAAGAGGTTGCAGAAAAG / CTCGGTATCTAGGAAGGGCA / 222 / No significant homology / - / -
53 / CK484628 / (TC)4 / DCM53 / CGCGGGATTACTTTGAAAAA / GAACTTGTCCACCCTGGAAG / 199 / pentose-5-phosphate-3-epimerase [Solanum tuberosum] / 4.00E-70 / 265
54 / CR-EST03 / C1A8R / EG328981 / (TGG)4 / CofEST-SSR14 / GCAGCCTAAGCAAATCAAGC / TAAAGTACTGCGCATTCCCC / 138 / At3g08610 [Arabidopsis thaliana] / 1E-19 / 98
55 / CR-EST29 / C1D11R / EG328992 / (GA)4 / CofEST-SSR15 / CGGAGTGTTGGAGGAGGTAA / TACAGTCCAATAGCCGGACC / 183 / unknown protein [Oryza sativa var. japonica] / 5.00E-23 / 79
56 / CR-EST26 / C1D8R / EG329003 / (AT)4 / CofEST-SSR16 / CGTTGATTGCCCTTTTGATT / GCCCATTGAAGAGAAGAAAGG / 279 / No significant homology / - / -
57 / CR-EST43 / C1E10R / EG329045 / (CT)4 / CofEST-SSR17 / TAATTAAAATGCCCTGCGTG / AAATTCATGCTCCATGCTCTT / 103 / No significant homology / - / -
58 / CR-EST112 / C1H24R / EG329024 / (AAG)5 / CofEST-SSR18 / AATGCGTCAACACCAATTCA / TGCTGTCTTTGCTTTCATGG / 129 / unknown [Arabidopsis thaliana] / 3.00E-24 / 113
59 / CR-EST98 / C1H7R / EG329034 / (TA)4 / CofEST-SSR19 / AGAGGAGGCTTTGATGCAGA / ATCCCCGAAGCCTAAACATT / 101 / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] / 1.00E-54 / 214
60 / CR-EST98 / C1H7R / EG329034 / (GA)4 / CofEST-SSR20 / GAGAGACGTTTTGTCGGAGG / GGTAAGAACACGGCCGTAAA / 276 / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] / 1.00E-54 / 214
61 / CR-EST117 / C1I15R / EG328905 / (GT)4 / CofEST-SSR21 / TTCCAAAGCTGACTGCAATG / AGGTTGCTGTGTCCACCTTC / 126 / auxin-repressed protein like-protein [Malus x domestica] / 1E-18 / 94
62 / CR-EST118 / C1I16R / EG328916 / (CT)4 / CofEST-SSR22 / TCGGGTTCTGTGTTCTTTCC / TTCTCTTGGGAGATAGCGGA / 232 / heat shock protein [Petunia x hybrida] / 3.00E-44 / 180
63 / CR-EST140 / C1K20R / EG328927 / (CCT)4 / CofEST-SSR23 / TTCAGTCCTTTCCAAACTCCA / GGGAACTTGAAAACCCTCCT / 233 / At1g77350/F2P24_6 unknown protein [Arabidopsis thaliana] / 9.00E-35 / 148
64 / CR-EST159 / C1O14R / EG328938 / (ACT)4 / CofEST-SSR24 / ATCCAGAACAAAAGCCAACG / CCAGAATCGCATGTATGAATTT / 267 / No significant homology / - / -
65 / CR-EST165 / C1O21R / EG328949 / (AC)7n(TA)4 / CofEST-SSR25 / AGAGGGTCATTTCACATCCG / GGTTGGGTTTTGGTTTGGT / 197 / No significant homology / - / -
66 / CR-EST192 / C2A2RR / CofEST-SSR01
(AY705497) / (TC)13 / CofEST-SSR01 / TCGCGGTTTTGTTGCTTCCCAG / GCAGCATGGCAGAAAAACCTCAACTT / 150 / sulfite reductase [Nicotiana tabacum] / 1.00E-43 / 177
67 / CR-EST195 / C2A7R / EG328956 / (TCT)4n(TC)4 / CofEST-SSR26 / CTGCACGTAAGAGGACCCAT / TTTGGTTCCGGAAAGAAGTG / 180 / putative cytochrome B 561[Craterostigma plantagineum] / 9.00E-29 / 90
68 / CR-EST240 / C2D18R / EG328957 / (CTG)4 / CofEST-SSR27 / GGGATGGAAACATTGTGGAC / GCTACGACAATCACTGACGG / 190 / thioredoxin [Capsicum annuum] / 4.00E-45 / 182
69 / CR-EST234 / C2D5R / EG328958 / (AG)6 / CofEST-SSR28 / CATCAAAAGGCTTCTTCGTGT / CGGGTAACCTCGATCAAAAA / 195 / No significant homology / - / -
70 / CR-EST255 / C2E16R / EG328959 / (AG)4 / CofEST-SSR29 / TGGTATGCTCGTCGAATCAG / GGGTTCTCTGAGGGAAGGAC / 128 / unknown protein [Arabidopsis thaliana] / 1.00E-83 / 311
71 / CR-EST256 / C2E17R / EG328960 / (TC)5 / CofEST-SSR30 / TATCGCACAGTTCATCTCGC / CCCTCCTCTGCTGTTTCTTG / 228 / No significant homology / - / -
72 / CR-EST243 / C2E2R / EG328961 / (AAG)4 / CofEST-SSR31 / ATGCAGGAAAAAGAAGGCAA / AATACTGGCACCACAAAGGC / 146 / NONE / - / -
73 / CR-EST267 / C2F7R / EG328962 / (AG)5 / CofEST-SSR32 / CCTCAGAAGCACTGCATGG / TCAAGCGATTTGACTGTTCG / 271 / putative RNA helicase [Oryza sativa] / 3.00E-84 / 313
74 / CR-EST293 / C2G19RR / EG328963 / (A)20n(ATT)4 / CofEST-SSR33 / AAACAAAGGGTTACAACGACG / TGGGGTGTAATAAAAGAAGAAGTTG / 191 / putative acetone-cyanohydrin lyase [Arabidopsis thaliana] / 1E-13 / 77
75 / CR-EST285 / C2G6R / EG328964 / (CT)4 / CofEST-SSR34 / CCACCTCAATTTCCGTCACT / CACTCTTTTGCAGAAAGCCC / 183 / OBP33pep like protein [Arabidopsis thaliana] / 2.00E-69 / 263
76 / CR-EST327 / C2J17R / EG328965 / (TG)4 / CofEST-SSR35 / TGTGTCAACTGCACCTGTGA / CACCTCGTTACAGGATGAGGA / 225 / metallothionein-like protein [Citrus unshiu] / 2.00E-22 / 106
77 / CR-EST330 / C2J22R / AY705507 / (GGT)4 / CofEST-SSR36 / AGCCGGAGAAGAAGAAGGAC / ATCGGTGGCTGGTAGTTTTG / 214 / unknown [Populus tremuloides] / 1E-16 / 88
78 / CR-EST330 / C2J22R / CofEST-SSR03
(AY705507) / (TC)13 / CofEST-SSR03 / GGACAAAACACCGCCCAAAATA / AGCGAGACAGAGGAAGGGAATATT / 153 / unknown [Populus tremuloides] / 1E-16 / 88
79 / CR-EST318 / C2J3R / EG328966 / (TC)4 / CofEST-SSR37 / TATGGCGGCACTGAATTGTA / TGGTTGACAGGATCCAGATG / 258 / hyoscyamine 6-dioxygenase hydroxylase, putative [Arabidopsis thaliana] / 8.00E-55 / 215
80 / CR-EST351 / C2L19R / EG328967 / (AT)4 / CofEST-SSR38 / TCATGCAACAGTGGCTTTTC / GCACAAACCCACAACATGC / 211 / No significant homology / - / -
81 / CR-EST390 / C2O6R / AY705498 / (AAG)4n(GAA)6 / CofEST-SSR39 / TCCTGCGAGGAGGAGTTAAA / AAGTGCAGGATTCTATGGCG / 174 / unknown protein [Arabidopsis thaliana] / 2E-06 / 40
82 / CR-EST390 / C2O6R / CofEST-SSR02
(AY705498) / (AAG)4n(GAA)6 / CofEST-SSR02 / CTGCGAGGAGGAGTTAAAGATACCAC / GCCGGGAGTCTAGGGTTCTGTG / 151 / unknown protein [Arabidopsis thaliana] / 2E-06 / 40
83 / CR-EST390 / C2O6R / AY705498 / (TG)6 / CofEST-SSR40 / TGCTTTACGGTCTGGCTTTT / GAGGATTTCCAATTTTGCCA / 157 / unknown protein [Arabidopsis thaliana] / 2E-06 / 40
84 / CR-EST403 / C2P11R / EG328968 / (GT)4 / CofEST-SSR41 / TGCTGAAAGGACGTCTGTGT / CGTACACCGTTTTTCCGTCT / 177 / No significant homology / - / -
85 / CR-EST402 / C2P8R / EG328969 / (AAG)4 / CofEST-SSR42 / AAACCAGTGGTGCCTAATGC / GTGACCAATATTCCTGCGGT / 183 / No significant homology / - / -
86 / CR-EST407 / C3A3R / EG328970 / (CCT)4 / CofEST-SSR43 / CACCATGTGTCCTTCCTGTG / TTGAGGGAGGGAGCTACTCA / 219 / SlHDL2 [Silene latifolia] / 3.00E-22 / 105
87 / CR-EST414 / C3B5R / EG328971 / (AG)4 / CofEST-SSR44 / GGACAGCGTGGTGGATACTT / ATATGTGCCCGCTTTCTCAG / 214 / putative alanine aminotransferase [Arabidopsis thaliana] / E-106 / 334
88 / CR-EST428 / C3C22R / EG328972 / (TC)7 / CofEST-SSR45 / CTCTCCCCTCACTTCACCAA / ATGAAATCACGTTTGAGGGC / 100 / NONE / - / -
89 / CR-EST431 / C3D9R9 / EG328973 / (AG)5 / CofEST-SSR46 / AAACCAAACCAAAGTGGCTG / CCTTCCTGCTCCAGCTATTG / 268 / At1g66140/F15E12_19 unknown protein [Arabidopsis thaliana] / 4.00E-30 / 130
90 / CR-EST433 / C3E1R / EG328974 / (AAT)5 / CofEST-SSR47 / TTCGAATGCGGATGTACTCA / TTTCTCAGTGTGGGTGGTGA / 244 / unknown protein [Arabidopsis thaliana] / 5.00E-33 / 142
91 / CR-EST452 / C3F14R / EG328975 / (GA)4 / CofEST-SSR48 / TCAATCCCCAACTTCATCGT / TCGACGTTGTATCCGTTCAA / 100 / putative NifU protein [Prunus armeniaca] / 2E-15 / 83
92 / CR-EST472 / C3G21R / EG328976 / (GT)4 / CofEST-SSR49 / TCCTCCTCCTCCTCCTCTTC / GCTTGACTAACCAGGATGCC / 275 / cinnamoyl CoA reductase 2 [Solanum tuberosum] / 5.00E-43 / 176
93 / CR-EST472 / C3G21R / EG328976 / (CCT)7 / CofEST-SSR50 / TGACAGAGACTGCTGGAATCA / ACAAGGCAGAGATTTCGTCG / 137 / cinnamoyl CoA reductase 2 [Solanum tuberosum] / 5.00E-43 / 176
94 / CR-EST477 / C3H5R / EG328977 / (CA)4 / CofEST-SSR51 / GCATTGGCCCTGATTAAAGA / TGGAACTTGGAGGGAAATCA / 105 / aldehyde dehydrogenase 1 precursor [Lotus corniculatus] / E-108 / 305
95 / CR-EST505 / C3J6R / EG328978 / (AG)4 / CofEST-SSR52 / CCTCTTCCATTACCCGTCATT / GAACCTGCCATTGCTTGTAA / 175 / P0406G08.7 [Oryza sativa var. japonica] / 2.00E-73 / 239
96 / CR-EST557 / C4A16R / EG328979 / (CT)12 / CofEST-SSR53 / AAGATCATTGGTTTTCGCCA / GACGACGAAGGAAGCAGAAG / 174 / NONE / - / -
97 / CR-EST561 / C4B20R / EG328980 / (TA)6 / CofEST-SSR54 / TACGCAGTCCCAAACACAAA / TTGGGAAATCTCACAATCCC / 221 / No significant homology / - / -
98 / CR-EST569 / C4D1R / EG328982 / (AG)4 / CofEST-SSR55 / GCTTGTTTGTCCAGTTGGGT / GGCTGCAAAGAAATTTCCAC / 274 / AT3g14930/K15M2_7 [Arabidopsis thaliana] / 1.00E-51 / 177
99 / CR-EST607 / C4H7R / EG328983 / (AG)4 / CofEST-SSR56 / CGTTTCCATTCTTGGAGCAT / GGCGAAAACGTCTAAGCATC / 161 / 37 kD inner envelope membrane polypeptide [Spinacia oleracea] / 2.00E-90 / 333
100 / CR-EST617 / C4I16R / AY705502 / (CTA)4n(GGT)6n(TAG)4 / CofEST-SSR57 / TCAACTCTGTCCAAAACCCC / CTCCTTCCTCCCACTTCCTC / 258 / No significant homology / - / -
101 / CR-EST617 / C4I16R / CofEST-SSR07
(AY705502) / (GGT)6 / CofEST-SSR07 / GGCCGCCTCGTATCTGCTATGG / GGTAACCAGAGCCCCGTGAACT / 199 / No significant homology / - / -
102 / CR-EST617 / C4I16R / AY705502 / (TCT)4 / CofEST-SSR58 / CACCAAAAAGGGCTTCTTCA / GGGGTTTTGGACAGAGTTGA / 159 / No significant homology / - / -
103 / CR-EST632 / C4K12R / EG328984 / (TC)4 / CofEST-SSR59 / TTGAAAACGGAAAGCAGGTT / TCAAAAGCGGCTAGGAGAAA / 125 / putative membrane import protein [Arabidopsis thaliana] / 1.00E-33 / 110
104 / CR-EST642 / C4L16R / EG328985 / (CT)4n(T)13 / CofEST-SSR60 / GGGTGAAATTCCTCCTGTGA / ACCCAGCAGCCTATCATGTC / 241 / hypothetical protein [Oryza sativa] / 3E-10 / 66
105 / CR-EST660 / C4N22R / EG328986 / (CTG)4 / CofEST-SSR61 / TATATCTGGGGAAGGTTGCG / GGCAGCCTTCTTTTCCTCTT / 169 / ripening regulated protein DDTFR10 [Lycopersicon esculentum] / 1.00E-46 / 188
106 / CR-EST680 / C5A18R / EG328987 / (CT)5 / CofEST-SSR62 / GTGCCTGAAAGAGGTCCAAC / CAACATTTGCTTTGGTGGTG / 271 / S-adenosylmethionine synthase; SAM synthase [Medicago sativa] / E-111 / 403
107 / CR-EST702 / C5C6R / EG328988 / (TA)4 / CofEST-SSR63 / GTGACCATCATCGAGGGAGT / GATAGGCAGAAGCCATGACC / 278 / metallothionein [Mimulus guttatus] / 1E-17 / 89
108 / CR-EST736 / C5E15R / EG328989 / (AT)5 / CofEST-SSR64 / GGGTTCTATTTGGCTGGTGA / ATTCGCACAGGGTTGAATCT / 253 / phytoene desaturase [Gentiana lutea] / 8.00E-73 / 275
109 / CR-EST740 / C5E19R / EG328990 / (TC)4 / CofEST-SSR65 / AGTATTGGTCGCCACCTCTC / TCAAACCGAAGGTTTTGGAG / 222 / non-photosynthetic ferredoxin [Citrus sinensis] / 2.00E-52 / 207
110 / CR-EST728 / C5E6R / EG328991 / (TC)4 / CofEST-SSR66 / CGCAGGAGGAGAACAGAAAA / CCGGGGATCTTGTTTGTAGA / 220 / protein phosphatase 2C [Lycopersicon esculentum] / 3.00E-36 / 153
111 / CR-EST748 / C5F12R / (CCA)4 / CofEST-SSR67 / CTTCCTCCCTGCCTCCTACT / CGCTTTGCGATCTTTTTAGG / 189 / A light-harvesting complex IIa protein / 2.00E-65 / 212
112 / CR-EST773 / C5G18R / EG328993 / (AT)6 / CofEST-SSR68 / CTGGAGCTAACGTCGGAGAC / ACTGTGATCAACGGATTGCT / 210 / glyceraldehyde-3-phosphate dehydrogenase (GAPN) [Zea mays] / 3E-18 / 85
113 / CR-EST783 / C5H6R / EG328994 / (CT)4n(A)10 / CofEST-SSR69 / GCGATACTCCCATACCCTCC / CGCTTCCCTCTCCTCTTGTT / 274 / No significant homology / - / -
114 / CR-EST808 / C5I20R / CofEST-SSR09
(AY705508) / (GT)10 / CofEST-SSR09 / TTGGCTTTTGTCCCTCCTTCCTCTG / AGCCCATTTCCCTCTCATCATTTCAAG / 119 / P0677H08.13 [Oryza sativa var. japonica] / 0.00008 / 49
115 / CR-EST876 / C5O14R / EG328995 / (TC)4 / CofEST-SSR70 / ATAAGCTCAACTCGCTGCGT / GGTGCATGATTCACAGGTTG / 160 / unknown protein [Oryza sativa] / 7.00E-35 / 149
116 / CR-EST879 / C5O22R / EG328996 / (CCA)4n(ACC)4 / CofEST-SSR71 / TAGACCAACCACCAAGCTCC / ATAGTGGGCTCCACCATCAA / 112 / Vip1 protein from Schizosaccharomyces pombe and a RNA recognition motif [Arabidopsis thaliana] / 6.00E-45 / 159
117 / CR-EST883 / C5P10R / EG328997 / (CT)4 / CofEST-SSR72 / GTGGTGCGAAGTTTACCGTT / GCTGCTGTTCCCACTGATTT / 162 / unknown [Arabidopsis thaliana] / 4.00E-24 / 112
118 / CR-EST889 / C5P20R / EG328998 / (AT)5(AC)7 / CofEST-SSR73 / CCCCACTTTATTCCAACCCT / TCAGTTTCCCCGATTACTGC / 173 / unknown protein [Arabidopsis thaliana] / 7.00E-27 / 122
119 / CR-EST891 / C6A7R / EG328999 / (GA)4 / CofEST-SSR74 / GTTTCTGCCACAAAGGAAGG / CCTGTCCAGAAACCACCACT / 153 / heat shock protein HSP82 [Zea mays] / 7.00E-78 / 291
120 / CR-EST903 / C6B8R / EG329000 / (CT)4 / CofEST-SSR75 / GTGTGGCTCAGGAACCTTGT / CGCCCATTTCTCTTGGATTA / 161 / No significant homology / - / -
121 / CR-EST928 / C6D13R / EG329001 / (TCAT)5(TTC)4n(A)12 / CofEST-SSR76 / GCCTCCATGAAAGCTGGTAA / GCCGAGTAAGCCAAAACTTG / 277 / Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] / 5E-14 / 79
122 / CR-EST937 / C6E8R / EG329002 / (TC)4 / CofEST-SSR77 / GAAAAGGCAGGTCCAACCTC / TTGCTTGGCTACCCTCACTT / 226 / B12D protein [Ipomoea batatas] / 7.00E-33 / 141
123 / CR-EST953 / C6F4R / EG329004 / (AGA)4 / CofEST-SSR78 / TCAATCCGATCACCTTCTCC / GCGAACTTCGACTTGCTTCT / 268 / Vacuolar ATP synthase subunit E (V-ATPase E subunit) [Citrus limon] / 1.00E-48 / 194
124 / CR-EST971 / C6G10R / EG329005 / (TC)5n(CAC)4 / CofEST-SSR79 / ACAACTACCCAAACCCCACA / ACAAAGGCCCCTGTTTCTTT / 279 / PREDICTED OJ1699_E05.18 gene product [Oryza sativa var. japonica] / 2.00E-37 / 157
125 / CR-EST976 / C6G15R / EG329006 / (TC)4 / CofEST-SSR80 / AGATATGCACCACCTCCACC / GCCCTATGAGGAGGATGACA / 159 / unnamed protein product [Arabidopsis thaliana] / 2E-11 / 69
126 / CR-EST966 / C6G2R / EG329007 / (CT)14 / CofEST-SSR81 / TCCCTTCATTCATCTTCGCT / CTCCCAGACCCCAGTAATCA / 128 / No significant homology / - / -
127 / CR-EST993 / C6H18R / EG329008 / (TAT)4n(CT)4 / CofEST-SSR82 / TACGGTGCGTACCAGCTATG / GACAGCAGACAAGAGGGGAC / 218 / No significant homology / - / -
128 / CR-EST1046 / C6M22R / EG329009 / (AG)4 / CofEST-SSR83 / TGATGTGGCTACAGACGCTC / AATGCCCTGGAAAGATCCTC / 126 / putative transcription factor II [Arabidopsis thaliana] / 9.00E-33 / 139
129 / CR-EST1056 / C6O4R / EG329010 / (GAG)4 / CofEST-SSR84 / CATGCTCTCCAGAAACCACC / CCATCAAAGAGTTTCAATGGC / 154 / NONE / - / -
130 / CR-EST1145 / C7I11R / EG329046 / (TC)4 / CofEST-SSR85 / TACAGAATGCGAAGCCACAG / CCCAGACGAGAAGAACTTTCA / 185 / No significant homology / - / -
131 / CR-EST1185 / C8A24R / CofEST-SSR12
(AY705505) / (TTC)12 / CofEST-SSR12 / CGCTGCTACTCCCTCTCCTCTCACT / GAGGCTGAGGCTTGAAGGAAATTAAT / 117 / NONE / - / -
132 / CR-EST1188 / C8B20R / CofEST-SSR13
(AY705506) / (CT)12 / CofEST-SSR13 / TCGGGAGGCTAGGGTTCTTTTTGGT / AATCACTCTTTCCCCTTTTTTCTTAACA / 131 / NONE / - / -
133 / CR-EST1194 / C8E5R / EG329047 / (TA)4 / CofEST-SSR86 / AAATGCGTACTCTGCGTTGA / TCGACAAGAGAATTTGGCCT / 154 / putative protein [Arabidopsis thaliana] / 5E-10 / 64
134 / CR-EST1227 / C8J22R / EG329011 / (TA)5 / CofEST-SSR87 / GCAGTCGAAGAAATAAGGCG / GAAAGAAAATGGAGGGAGGG / 235 / NONE / - / -
135 / CR-EST1227 / C8J22R / EG329011 / (CCT)4 / CofEST-SSR88 / GCAGTCGAAGAAATAAGGCG / GAAAGAAAATGGAGGGAGGG / 235 / NONE / - / -
136 / CR-EST1239 / C8N17R / EG329012 / (TA)4 / CofEST-SSR89 / CGTAGCGTCTCCTTTGGTGT / TCCAGAACAGAAGCACTTCATAA / 146 / No significant homology / - / -
137 / CR-EST1237 / C8N1R / CofEST-SSR11
(AY705504) / (CA)5(TA)4 / CofEST-SSR11 / GGCCGAGGGGAAAAAGAAGC / GGAAACCTCACGAGAAGATTACACAA / 100 / NONE / - / -
138 / S12-EST08 / S1B23R / EG328861 / (CG)4 / CofEST-SSR90 / TCGTCAAGTCCACCTCCTTT / GGAGAGCAATCCAAGCAAGT / 273 / PREDICTED 0015C07.31 gene product [Oryza sativa var. japonica] / 1.00E-20 / 100
139 / S12-EST03 / S1B3R / EG328872 / (AT)4 / CofEST-SSR91 / GCATCGCTTCTCCTTTGAAC / AAACTGGGCGGGACTAAACT / 228 / cytochrome P450 [Arabidopsis thaliana] / 2.00E-31 / 135
140 / S12-EST13 / S1C7R / EG328883 / (TA)4 / CofEST-SSR92 / TGAGGACCAGCTCACAGTTG / GCAAACAGAAGAGCCGACA / 213 / putative elongation factor beta-1 [Arabidopsis thaliana] / 1.00E-26 / 120
141 / S12-EST46 / S1G3R / EG328894 / (CT)4 / CofEST-SSR93 / TATAGGGCCATTGGCTTCAG / CTAGTGACCAACAGGCCAGG / 109 / NONE / - / -
142 / S12-EST49 / S1G7R / EG328902 / (AG)4 / CofEST-SSR94 / ACCAAAGTAGGCTGAGCACC / AGGGACCTCCATTGGTGATA / 273 / soluble-starch-synthase [Solanum tuberosum] / 2E-08 / 60
143 / S12-EST60 / S1H7 / EG328903 / (AGTCAT)4 / CofEST-SSR95 / GTTCATTCAAGAGGGCCAAA / GTCAGTGGCATGTCCTGTTG / 267 / NONE / - / -
144 / S12-EST81 / S1J3R / EG328832 / (TG)4 / CofEST-SSR96 / AAAGGATGGATGTACCGCTG / TGGGAAGTGAATAGGCGAAC / 151 / NONE / - / -
145 / S12-EST94 / S1K4R / EG328833 / (TG)4 / CofEST-SSR97 / TTACCCTGGATGGCGTTTTA / AGTCCAAGGCAAGGCAAATA / 162 / No significant homology / - / -
146 / S12-EST131 / S1P4R / EG328834 / (CTC)4 / CofEST-SSR98 / AAACGTAACTGGCCGTCCTA / TCGGAGGAAATAACAATGGC / 162 / No significant homology / - / -
147 / S12-EST146 / S1S17R / EG328835 / (TC)4 / CofEST-SSR99 / AAGAGTTCTGGCAAGGCAAA / CAAAGTAAAAAGCAAATCAGAAAGTG / 270 / unknown protein [Arabidopsis thaliana] / 6.00E-22 / 103
148 / S12-EST181 / S2F8R / EG328836 / (GAT)4 / CofEST-SSR100 / CGTCTTGAGTTTCTGTAATTGGAA / TACATGACCAGATGACCCGA / 101 / No significant homology / - / -
149 / S12-EST193 / S2I6R / EG328837 / (GGT)4 / CofEST-SSR101 / TCGGTACATCTTTGACGCTG / TCCACTTCAAGCGCATAGC / 162 / No significant homology / - / -
150 / S12-EST241 / S2L22R / EG328838 / (AAG)4 / CofEST-SSR102 / ATTGGAGCACCTGCCTACAT / CAAGGAGAAGGAGTGGGTCA / 172 / putative rac protein NTGP2 [Nicotiana tabacum] / 5.00E-94 / 345
151 / S12-EST284 / S2O15R / EG328839 / (TA)8 / CofEST-SSR103 / CGAATACCCAGGCTGTTGAT / ACCATTACCTGCGCCATAAG / 109 / PREDICTED OSJNBb0011E04.125 gene [Oryza sativa var. japonica] / 1.00E-21 / 103
152 / S12-EST276 / S2O4R / EG328840 / (TG)4 / CofEST-SSR104 / CCAATGTGATGATGGATGGA / ACCCTCTTGACACTCGCACT / 241 / expressed protein [Arabidopsis thaliana] / 4.00E-27 / 123
153 / S12-EST468 / S307R / EG328904 / (TC)4 / CofEST-SSR105 / CAGCACAGCTTCTATCAGCG / GACTCCAACGTCACAGACGA / 124 / salt tolerance protein 6 [Beta vulgaris] / 9.00E-28 / 123
154 / S12-EST306 / S3A15R / EG328841 / (AC)11 / CofEST-SSR106 / TCTCCCGTACTGCCTCTCAC / GGGTGGTGAGAAATTGCTGT / 123 / photosystem II protein W-like [Arabidopsis thaliana] / 4.00E-23 / 63
155 / S12-EST347 / S3D23R / EG328842 / (AT)4 / CofEST-SSR107 / TAGCCGCTCCATCACCTTAT / AGTGGATGAGAATGACTCCTTG / 211 / AKIN betagamma [Medicago truncatula] / 2.00E-40 / 166
156 / S12-EST368 / S3G19R / EG328843 / (ATT)4 / CofEST-SSR108 / ATTTGGCGGTCCTATCACAC / CCATATTGCCACGAAAAAGG / 280 / pot. cysteine proteinase [Carica papaya] / 2E-10 / 65
157 / S12-EST378 / S3H17R / EG328844 / (GA)4 / CofEST-SSR109 / CTGGAACCAGTGGTGAATTG / GAAAAAGATTCACATGTTGGCA / 211 / NONE / - / -
158 / S12-EST371 / S3H1R / EG328845 / (GAA)5n(GAC)6 / CofEST-SSR110 / GACGAAGCCACCGAATACAT / CTCTTTGTCACCGGCTTTTC / 252 / P0684B02.23 [Oryza sativa var. japonica] / 6.00E-34 / 145
159 / S12-EST425 / S3L9R / EG328846 / (GGA)4n(ATC)4(AGC)5 / CofEST-SSR111 / ATCTGGAGGAGGGGTTGTTC / TTTTCACAAACTGTGGCTGG / 206 / No significant homology / - / -
160 / S12-EST460 / S3N19R / EG328847 / (AT)4 / CofEST-SSR112 / AAAAATTTTCAAATTGGATGAGAT / CCCTTGGCAGTATCTATCGG / 174 / NONE / - / -
161 / S12-EST829 / S4F20 / CofEST-SSR14 / (AT)11 / CofEST-SSR14 / GCAGAGTACGCGGGGAGAAG / TCCTTATGTTTGTGTGATTGAATGAT / 258 / NONE / - / -
162 / S12-EST538 / S4K16R / EG328848 / (GCCTGC)4 / CofEST-SSR113 / ATGTCTCCCATGTCTCCAGG / TCATTTGACGACCAGATGGA / 199 / No significant homology / - / -
163 / S12-EST830 / S5H2R / CofEST-SSR10 / (CT)10 / CofEST-SSR10 / GGGGGTTTGATCGCGCA / AAGCGTATCAATTAAAAAAGAAAAAAA / 195 / NONE / - / -
164 / S12-EST590 / S6E12R / EG328849 / (TTC)4 / CofEST-SSR114 / TGTTGAACTTTGGTTTTCGTTC / AGACAAATGCTTTGAATGCG / 101 / No significant homology / - / -
165 / S12-EST631 / S6G16R / EG328850 / (ATC)6 / CofEST-SSR115 / ATGGATGTGGTGCTCTCTCC / TCAGATATACATGATGGTTTTGCAT / 147 / alpha-L-arabinofuranosidase [Malus x domestica] / 1E-14 / 80
166 / S12-EST636 / S6G22R / EG328851 / (AGA)4n(AGC)4 / CofEST-SSR116 / TTGTGGGGACATCCAAGAAT / TGGGGTTGATGGACTAAAGC / 179 / No significant homology / - / -
167 / S12-EST698 / S6L18R / EG328852 / (GA)5 / CofEST-SSR117 / TACAAACCCCTCATTGAGCC / TTCCCTTTATTCATCGTCCG / 250 / unknown protein [Arabidopsis thaliana] / 9.00E-55 / 140
168 / S12-EST704 / S6M10R / EG328853 / (TTC)4 / CofEST-SSR118 / CGAGCAAGCAGAAAAACTCC / TCTGCGCACTAGCATTGAAC / 264 / At2g42220/T24P15.13 [Arabidopsis thaliana] / 5E-18 / 90
169 / S12-EST771 / S7G9R / EG328854 / (AT)4 / CofEST-SSR119 / TCGGAAGAAGGGAGTGAGAA / TCCCTATGTATCTTTTCCGGAGT / 250 / No significant homology / - / -
170 / S12-EST778 / S7H2R / EG328855 / (TTTC)5 / CofEST-SSR120 / GAAAGTCATTCTCATGCCCG / AACTACAACTCCCGGAGGCT / 210 / No significant homology / - / -
171 / S12-EST160 / SS11B20 / EG328856 / (AG)4 / CofEST-SSR121 / AGGAAGTGAAAAGGGGGCTA / GTTCTCTCCCTCAGCCGAAT / 135 / No significant homology / - / -
172 / (cn01)
Cof-EST01 / C1E2F,
C5E16R,
S3L11R / EG329013, EG329014, EG328857 / (CA)5(TA) 4n (GT)4 / CofEST-SSR122 / GGGGAAAAAGAAGCATCACA / TCAAAGTCCCAAAAACAGGC / 251 / NONE / - / -
173 / (cn02)
Cof-EST02 / C6M21R, S1F8R
S3M8R,
S4B23R / (AT)4n(AT)5n (GT)5 / CofEST-SSR123 / CCATGAGCATCACGAGAAGA / GGATGGAGCAAACTCGAAAG / 228 / NONE / - / -
174 / (cn03)
Cof-EST03 / C1E18R, C1I19RR, C2J21R,
C2M6R, C3I6R, C3D1R,
C4C10R, C5N6R, C5I10R,
C5J7R, C6C12R, C7E8R, S2K2R / (GA)4 / CofEST-SSR124 / TGGAGGAGAAGAAGCCTGAA / CACGCGAATGCACATAAAAG / 192 / NONE / - / -
175 / (cn04)
Cof-EST04 / C1E5R, C5H5R
BQ448841 / (GA)4 / CofEST-SSR125 / CGGGATGAAGAGGTCGATTA / GGATCTCATGGGTGACTCGT / 235 / NONE / - / -
176 / (cn05)
Cof-EST05 / C1K7R
C2L23R / CofEST-SSR04 (AY705499) / (AC)10 / CofEST-SSR04 / GGTCGCTCACTCATATCTTCCAG / GCCTGGAAAGCAAACGTCTCA / 147 / NONE / - / -
177 / (cn06)
Cof-EST06 / C1L12R,
C2M18R
C5G22R / (CCA)4 / CofEST-SSR126 / GAGCTAGCGAGAATGGCATC / GTTGGTGGCAAGGGAAGTAA / 168 / NONE / - / -
178 / (cn09)
Cof-EST07 / C1P9R
C2M1R / (GAA)5 / CofEST-SSR127 / GAGCTCACTCTCAAGCAGCA / AGATTCTCTCTGGCCGTTGA / 137 / NONE / - / -
179 / (cn10)
Cof-EST08 / C1H13R,
C3L5R / (CT)4n(CT)9 / CofEST-SSR128 / ATGCCAACTCCACAAGGAAG / CGATTGAGAACCCAATTATGC / 271 / nuclear transport factor 2, putative [Arabidopsis thaliana] / 8.00E-57 / 223
180 / (cn10)
Cof-EST08 / C1H13R,
C3L5R / CofEST-SSR05 (AY705500) / (GA)4CA(GA)4 / CofEST-SSR05 / AAGGGGCATTGAACAGTTTTGAC / TTTCCGATTCTGCCTTGCTTCTT / 104 / nuclear transport factor 2, putative [Arabidopsis thaliana] / 8.00E-57 / 223
181 / (cn11)
Cof-EST09 / C1I22R
C5G6R / (CT)4 / CofEST-SSR129 / GGATAAGGACAGAGCCACCA / AGGGGGTTAGCAGTTCACG / 194 / ascorbate peroxidase [Crocus sativus] / 2.00E-62 / 167
182 / (cn12)
Cof-EST10 / C1K14R / (TCT)4n(T)16 / CofEST-SSR130 / GGACACTTGAAGAAGCGGAG / CACACGAGAAACCCACATTTT / 163 / No significant homology / - / -
183 / (cn14)
Cof-EST11 / C2B5R / (GT)4 / CofEST-SSR131 / ATCTGTCAATTACGGCCAGC / TTGATGCCCAACAGAAATGA / 144 / auxin-regulated protein GH3 homolog At2g46370 [Arabidopsis thaliana] / 3.00E-50 / 199
184 / (cn17)
Cof-EST12 / C2C3R
C2O19R / (AG)4 / CofEST-SSR132 / CCCATTCGAAGCTTATCCAA / TCGTCGATTATCAAAACGCA / 204 / unknown protein [Arabidopsis thaliana] / 6E-16 / 86
185 / (cn18)
Cof-EST13 / C2F11R
C2F12R, C2J6R / (TA)4 / CofEST-SSR133 / ACAGGATCTTACGGGCACAC / CGGTACAACTGCACCTTCAA / 255 / No significant homology / - / -
186 / (cn19)
Cof-EST14 / S1B5R, S1F11R
S7H19R / (TA)4 / CofEST-SSR134 / GGCTTCTGGTGGAAAATTGA / GCATGGCAGCAGTACATCAT / 268 / No significant homology / - / -
187 / (cn20)
Cof-EST15 / C2F20R
C5J3R / (AT)10 / CofEST-SSR135 / AGCCAGAGCATCAGAGTGGT / TGTGTTCAAACTATTATCAGGATGG / 139 / BAA06153.1| cytokinin-repressed protein CR9 [Cucumis sativus] / 4.00E-25 / 115
188 / (cn21)
Cof-EST16 / C2G20R
C6G5R / (AGC)6 / CofEST-SSR136 / CAGATGGTAGCACTGTCGGA / TAACGGTCACACCGATGAAA / 133 / putative U4/U6.U5 tri-snRNP-associated 65 kDa protein [Oryza sativa] / 4E-12 / 72
189 / (cn22)
Cof-EST17 / C2H4R, C2N11R, C5L18R
C6H14RR, S2K3R,S3K19R / (ATG)4n(TG)4 / CofEST-SSR137 / CCGGGGGACGTAGTAGAAGT / ACAGTACCAGCAAACGCACA / 191 / NONE / - / -
190 / (cn23)
Cof-EST18 / C2O23R
C2L14R,
S3D14R / (CAC)4 / CofEST-SSR138 / TGCATGAGAAGCACCAAGTC / AAAAGACCACCCCAAGGATT / 230 / putative transcription factor [Vitis vinifera] / 1E-07 / 42
191 / (cn24)
Cof-EST19 / C2J10R
C4G10R / (TA)4 / CofEST-SSR139 / ACTGCAAATCTGTGGCCTTT / CACTAGCCAAGGAAGTTCGC / 135 / NONE / - / -
192 / (cn25)
Cof-EST20 / C2L4R
C2N14R / (TA)5 / CofEST-SSR140 / CTCCCTCCTCTTCTCATCCC / GAATTACAGCCCAAACCAGC / 106 / NONE / - / -
193 / (cn26)
Cof-EST21 / C3H19R
C3G19R / (TG)5 / CofEST-SSR141 / CATCTCTTTCGCCATTGGAT / TCTGCTTGTCCTGTCATTGC / 214 / unknown protein [Arabidopsis thaliana] / 2E-17 / 82
194 / (cn27)
Cof-EST22 / C3I14R
S1M14R / (AG)4 / CofEST-SSR142 / AGAAACCGCAGAAACAAGGA / CCTTTGGCTTTTGTTCCTCA / 174 / wound-inducible basic protein [Phaseolus vulgaris] / 4E-18 / 93
195 / (cn33)
Cof-EST23 / C4G12R
C7C21R / CoffEST06 (AY705501) / (AAAGG)4 / CoffEST06 / CAGGCACAGAAGGAATGAAGAGC / TGGTGGTATGGAAAACAGGAAGG / 130 / Low-temperature-induced cysteine proteinase precursor - tomato (fragment) / 9.00E-27 / 120
196 / (cn36)
Cof-EST24 / C5D19R
C5C20R
C6G13R / (CT)4n(A)10 / CofEST-SSR144 / CAGGAAAAGAGACAAGAACCAA / TGAGAGTGAGGGCTGGAGTT / 120 / No significant homology / - / -
197 / (cn37)
Cof-EST25 / C5C5R, C5D5R
C5M21R / CofEST-SSR08 (AY705503) / (AAG)5 / CofEST-SSR08 / TCCATAACACAGAAATTTCCAGAGAGA / ACCGTAACCTCCGTCTTCGAACTG / 145 / NONE / - / -
198 / (cn39)
Cof-EST26 / C5F20R
S4D17R / (TA)4 / CofEST-SSR145 / CTTCCCGAAAAGAATGTCCA / GGCTTCCCGACATCAAACTA / 264 / beta-amylase [Prunus armeniaca] / 9.00E-20 / 97
199 / (cn40)
Cof-EST27 / C5P2R
C5B2R / (TCT)4 / CofEST-SSR146 / CCATTCAAGGGGAATGTGAG / GCCCAGCAGAGTGACCTCTA / 259 / plastid ribosomal protein CL15 [Arabidopsis thaliana] / 3.00E-47 / 190
200 / (cn41)
Cof-EST28 / C5O5R
S1P20R / (TG)4 / CofEST-SSR147 / CTTCAACTGGTGCAGCAAAA / CCATGAAGCATCAACTGTGG / 279 / putative calcium-binding protein, calreticulin [Arabidopsis thaliana] / 1.00E-70 / 189
201 / (cn42)
Cof-EST29 / C5P15R
C6D2R / (AT)4 / CofEST-SSR148 / TGCTAGAGCTGCCACAGAGA / CCCAAACTGGTTACAAGGGA / 223 / glutathione peroxidase [Zantedeschia aethiopica] / 7.00E-43 / 175
202 / (cn43)
Cof-EST30 / C5N13R
C7E2R / (TC)4 / CofEST-SSR149 / CGTACTGAGCTGATTGGCAG / GTGCAAGTTGAAGCAATCCA / 253 / unknown [Lycopersicon esculentum] / 2.00E-84 / 226
203 / (cn44)
Cof-EST31 / C5J8R
S4C17R / (CA)4 / CofEST-SSR150 / CCAGGGCCAAACAAATAATG / TATAGTTCGGCCTTGCCATC / 130 / ATP-dependent metalloprotease
[Arabidopsis thaliana] / E-108 / 394
204 / (cn45)
Cof-EST32 / C6A16R
C6A17R / (CTT)6 / CofEST-SSR151 / GCAGGAATCAGGAAATAAATGG / GAATAGGGAATGGAGCAGCA / 238 / NONE / - / -
205 / (cn46)
Cof-EST33 / C6G14R
C6G19R
C6I20R / (GAT)5 / CofEST-SSR152 / AGGCCAAGAAGACCAAGACA / AAACAAAGGGACACCCACTG / 158 / putative protein [Arabidopsis thaliana] / 8E-12 / 71
206 / (cn47)
Cof-EST34 / C6I14R
C6I15R / (GAA)4 / CofEST-SSR153 / CCTCCTCCTTTTCATCACCA / TCCAAAGGGATTCAAGAACG / 264 / At2g41120 hypothetical protein [Arabidopsis thaliana] / 1.00E-43 / 170
207 / (cn49)
Cof-EST35 / C6K8R
C6L8R / (ATGG)4 / CofEST-SSR154 / AAGGAATCATTTTCAAACCTCTG / CGGTATATGGTATAAGGCTCGTTT / 119 / NONE / - / -
208 / (cn5)
Cof-EST36 / C1K7R
C2L23R / (AC)10n(AT)5 / CofEST-SSR155 / GGTCGCTCACTCATATCTTCC / AAACGGTGTCAGTTTCACCC / 138 / Heat shock protein 83 / 2.00E-63 / 219
209 / (cn50)
Cof-EST37 / C6N11R, S1P22R,
S2L18R, S7B14R / (TC)4 / CofEST-SSR156 / AGTACGCGGGGGAAATAAAG / CGATTGGACCCATTTCAGAT / 147 / fiber protein Fb25 [Gossypium barbadense] / 2.00E-28 / 127
210 / (cn52)
Cof-EST38 / C7A5R, S7A5R
S7A7R / (AG)4 / CofEST-SSR157 / AGTACGCGGGGGAGAAAG / TGCTTAAGAAGGAGGCTGGA / 136 / NONE / - / -
211 / (cn54)
Cof-EST39 / S1H14, S1O23R
S3N8R, S3N9R / (AG)4 / CofEST-SSR158 / ATTGCCGTTGTTCTCAATCC / AGAACCCAAATTGCTGTTGC / 228 / unknown [Arabidopsis thaliana] / 3.00E-28 / 127
212 / (cn55)
Cof-EST40 / S1I21R
S3B4R / (AG)15 / CofEST-SSR159 / TAGGCAAGATTGCAGGGACT / TCCAAGGAACCAAAACGGTA / 264 / unknown protein [Oryza sativa var. japonica] / 1E-19 / 99
213 / (cn55)
Cof-EST40 / S1I21R
S3B4R / (CCA)5 / CofEST-SSR160 / TCCCACCACCTAGACACACA / AAATTTGAAGCACAGGACGG / 147 / unknown protein [Oryza sativa var. japonica] / 1E-19 / 99
214 / (cn57)
Cof-EST41 / S2O6R, S7N10R
BQ449121 / (AT)4n(T)10 / CofEST-SSR161 / TTTCTGACTCTGGTTTTGCG / TATCATCAGATCGCCCTTCC / 251 / NONE / - / -
215 / (cn58)
Cof-EST42 / S3J11R
S7K16R-SUP / (GT)4 / CofEST-SSR162 / TTCAAGGCTGAAGACCCTGT / CACGCTCCTTTTCAATGCTA / 260 / galactinol synthase, isoform GolS- [Ajuga reptans] / 3.00E-28 / 125
216 / (cn59)
Cof-EST43 / S3M7R
BQ448970 / (CCT)4 / CofEST-SSR163 / GGCTCTACAACACCTGGCTC / ATTTCCCCATGACAAAGCTG / 244 / No significant homology / - / -
217 / (cn61)
Cof-EST44 / S6G24R
S6H2R, S6L15R / (GAA)5 / CofEST-SSR164 / GCTGGGAACAACGCAGAGTA / TTCACAGATCCAGCAGCAAC / 134 / No significant homology / - / -
218 / (cn62)
Cof-EST45 / S6H6R
S7G24R / (TAC)4n(A)11 / CofEST-SSR165 / CAGCTTGAGGAAGAGGAGGA / TCTTCCCAAACCATAGGTTCA / 232 / Sm-like protein [Arabidopsis thaliana] / 6.00E-29 / 128
219 / (cn63)
Cof-EST46 / S7D3R
S7G1R / (CA)4 / CofEST-SSR166 / AGCCGCTTGATTATCACACA / CTGAATATCGCGCTATGGCT / 119 / putative receptor kinase [Solanum demissum] / 2.00E-25 / 115
220 / (cn64)
Cof-EST47 / S7D5R
BQ449068, BQ449078 / (TCG)5n(TCA)5 / CofEST-SSR167 / CTTTCTCTTCTTTGGGGGCT / GGGCGGAAGAGAATGGTG / 215 / No significant homology / - / -
221 / (cn65)
Cof-EST48 / S7E10R, S7G5R
S7J12R / (AT)4 / CofEST-SSR168 / ATTTGGGAGGCTGACATTTG / TTTCTAAGGAATGATGCGGG / 243 / No significant homology / - / -
222 / (cn75)
Cof-EST49 / BQ448777
BQ449038 / (GCA)4 / CofEST-SSR169 / GCGCGAGTTAACCGATAAAA / AAGCAGAGTTGTTGGAGGGA / 196 / OSJNBb0059K02.15 [Oryza sativa var. japonica] / 9E-09 / 60
223 / (cn78)
Cof-EST50 / BQ448954
BQ449040, BQ449076 / (TTG)4 / CofEST-SSR170 / CCTGGAGTACCAGAAGCAGC / ATCTAGATCATCATCGCCCG / 231 / No significant homology / - / -
224 / (cn79)
Cof-EST51 / BQ449099
BQ449100 / (TTG)4 / CofEST-SSR171 / CCTGGAGTACCAGAAGCAGC / ATCTAGATCATCATCGCCCG / 231 / No significant homology / - / -
1EST-IDs having prefix BQ are the ESTs from public domain while the remaining ESTs are the unpublished data of CCMB. The cDNA
clones for the corresponding ESTs can be obtained on request.
2Microsatellite IDs designated at CCMB for the markers used for validation and transferability studies.
Note: NCBI-GenBank accession numbers for >115 above referred SSR-positive EST-clones (generated at CCMB) have been included in the 3rd column. The information about the remaining EST sequences/contings and clones can be obtained on request.