Blast Target Sequences of Segment 1 PB2 Gene (Query: FJ966079)
Blast target sequences of segment 1 PB2 gene (Query: FJ966079)
Accession / Description / Max score / Query coverage / Max identityFJ969530.1 / A/California/07/2009(H1N1) / 4211 / 100% / 100%
FJ969516.1 / A/California/04/2009(H1N1) / 4211 / 100% / 100%
FJ966976.1 / A/California/07/2009(H1N1) / 4211 / 100% / 100%
FJ966079.1 / A/California/04/2009(H1N1) / 4211 / 100% / 100%
FJ966955.1 / A/California/05/2009(H1N1) / 4200 / 100% / 99%
FJ969525.1 / A/Texas/04/2009(H1N1) / 4194 / 100% / 99%
FJ966963.1 / A/California/06/2009(H1N1) / 4172 / 100% / 99%
1 / EU301177.2 / A/swine/Korea/JNS06/2004(H3N2) / 3779 / 100% / 96%
2 / AF455734.1 / A/Swine/Minnesota/55551/00 (H1N2) / 3773 / 100% / 96%
3 / CY033794.1 / A/mallard duck/South Dakota/Sg-00128/2007 / 3771 / 98% / 96%
4 / CY032880.1 / A/mallard duck/South Dakota/Sg-00127/2007(H3N2) / 3771 / 98% / 96%
5 / CY032879.1 / A/pintail duck/South Dakota/Sg-00126/2007(H3N2) / 3768 / 98% / 96%
6 / CY032878.1 / A/mallard duck/South Dakota/Sg-00125/2007(H3N2) / 3768 / 98% / 96%
7 / AF455736.1 / A/Swine/Indiana/P12439/00 (H1N2) / 3768 / 100% / 96%
8 / AF455732.1 / A/Swine/North Carolina/98225/01(H1N2) / 3768 / 100% / 96%
9 / AF251434.1 / A/Swine/Minnesota/593/99 (H3N2) / 3757 / 100% / 96%
10 / AF251426.1 / A/Swine/Iowa/569/99 (H3N2) / 3757 / 100% / 96%
11 / AF251418.1 / A/Swine/Iowa/533/99 (H3N2) / 3757 / 100% / 96%
12 / AF251410.1 / A/Swine/Nebraska/209/98 (H3N2) / 3757 / 100% / 96%
13 / AY233387.1 / A/duck/NC/91347/01(H1N2) / 3746 / 100% / 96%
14 / AF455733.1 / A/Swine/North Carolina/93523/01 (H1N2) / 3729 / 100% / 96%
15 / AF250131.1 / A/Swine/Indiana/9K035/99 (H1N2) / 3729 / 100% / 96%
16 / EF551050.1 / A/swine/North Carolina/2003(H3N2) / 3723 / 100% / 96%
17 / EU798934.1 / A/swine/Korea/CY05/2007(H3N2) / 3718 / 100% / 96%
18 / AF455737.1 / A/Swine/Illinois/100085A/01 (H1N2) / 3718 / 100% / 96%
19 / AF455731.1 / A/Swine/Ohio/891/01(H1N2) / 3718 / 100% / 96%
20 / EU798936.1 / A/swine/Korea/CY09/2007(H3N2) / 3712 / 100% / 96%
21 / EU798933.1 / A/swine/Korea/CY04/2007(H3N2) / 3712 / 100% / 96%
22 / AF455738.1 / A/Swine/Illinois/100084/01 (H1N2) / 3707 / 100% / 96%
23 / AF455735.1 / A/Swine/Iowa/930/01(H1N2) / 3707 / 100% / 96%
24 / EU798935.1 / A/swine/Korea/CY07/2007(H3N2) / 3696 / 100% / 95%
25 / EU798932.1 / A/swine/Korea/CAS09/2006(H3N2) / 3690 / 100% / 95%
26 / DQ469963.1 / A/swine/Alberta/14722/2005(H3N2) / 3685 / 100% / 95%
27 / AY129163.1 / A/Swine/Korea/CY02/02(H1N2) / 3685 / 100% / 95%
28 / EU798937.1 / A/swine/Korea/CY10/2007(H3N2) / 3679 / 100% / 95%
29 / EU798929.1 / A/swine/Korea/CAS05/2004(H3N2) / 3679 / 100% / 95%
30 / EU409953.1 / A/swine/Ohio/75004/04(H1N1) / 3677 / 99% / 95%
31 / EU798931.1 / A/swine/Korea/CAS07/2005(H3N2) / 3674 / 100% / 95%
32 / EU798930.1 / A/swine/Korea/CAN04/2005(H3N2) / 3674 / 100% / 95%
33 / EU015993.1 / A/swine/Guangxi/13/2006(H1N2) / 3663 / 100% / 95%
34 / EU798919.1 / A/swine/Korea/CAS08/2005(H1N1) / 3657 / 100% / 95%
35 / EU798918.1 / A/swine/Korea/CAN01/2004(H1N1) / 3657 / 100% / 95%
36 / EU735825.1 / A/turkey/OH/313053/2004(H3N2) / 3657 / 100% / 95%
37 / DQ335778.1 / A/turkey/Ohio/313053/04(H3N2) / 3657 / 100% / 95%
38 / DQ469979.1 / A/swine/Manitoba/12707/2005(H3N2) / 3651 / 100% / 95%
39 / EU735833.1 / A/turkey/NC/353568/2005(H3N2) / 3646 / 100% / 95%
40 / DQ469995.1 / A/turkey/Ontario/31232/2005(H3N2) / 3646 / 100% / 95%
41 / DQ469987.1 / A/swine/Ontario/33853/2005(H3N2) / 3646 / 100% / 95%
42 / DQ469971.1 / A/swine/British Columbia/28103/2005(H3N2) / 3646 / 100% / 95%
43 / DQ469955.1 / A/Ontario/RV1273/2005(H3N2) / 3646 / 100% / 95%
44 / DQ150422.1 / A/swine/MI/PU243/04 (H3N1) / 3646 / 100% / 95%
45 / EU743217.1 / A/turkey/MN/366767/2005(H3N2) / 3635 / 100% / 95%
46 / EF551042.1 / A/turkey/Illinois/2004(H3N2) / 3635 / 100% / 95%
47 / EU084946.1 / A/chukar/MN/14591-7/1998(H5N2) / 3629 / 100% / 95%
48 / DQ889682.1 / A/Iowa/CEID23/2005(H1N1) / 3624 / 100% / 95%
49 / DQ150430.1 / A/swine/IN/PU542/04 (H3N1) / 3618 / 100% / 95%
50 / FJ517305.1 / A/mallard/Minnesota/371/1998(H4N2) / 3613 / 100% / 95%
51 / DQ923520.1 / A/swine/Korea/PZ72-1/2006(H3N1) / 3613 / 100% / 95%
52 / EU798920.1 / A/swine/Korea/Hongsong2/2004(H1N2) / 3607 / 100% / 95%
53 / EU798927.1 / A/swine/Korea/PZ14/2006(H1N2) / 3602 / 100% / 95%
54 / EU798926.1 / A/swine/Korea/PZ7/2006(H1N2) / 3602 / 100% / 95%
55 / FJ374512.1 / A/swine/Shanghai/1/2007(H1N2) / 3596 / 100% / 95%
56 / EU798922.1 / A/swine/Korea/JL02/2005(H1N2) / 3596 / 100% / 95%
57 / EU798925.1 / A/swine/Korea/PZ4/2006(H1N2) / 3591 / 100% / 95%
58 / EU798924.1 / A/swine/Korea/Asan04/2006(H1N2) / 3591 / 100% / 95%
59 / EU798921.1 / A/swine/Korea/JL01/2005(H1N2) / 3591 / 100% / 95%
60 / DQ923521.1 / A/swine/Korea/CN22/2006(H3N1) / 3591 / 100% / 95%
61 / CY004960.1 / A/blue-winged teal/Alberta/293/2003(H4N6) / 3591 / 100% / 95%
62 / EU798923.1 / A/swine/Korea/JL04/2005(H1N2) 1 / 3585 / 100% / 95%
63 / EU604691.1 / A/swine/OH/511445/2007(H1N1) / 3579 / 100% / 95%
64 / EU871875.1 / A/mallard/MN/158/2000(H3N9) / 3579 / 100% / 95%
65 / EU743559.1 / A/mallard/MN/515/2000(H3N6) / 3579 / 100% / 95%
66 / EU409958.1 / A/swine/Ohio/C62006/06(H1N1) / 3578 / 99% / 95%
67 / CY015491.1 / A/mallard/Ohio/170/1999(H6N5) / 3574 / 100% / 94%
68 / FJ461607.1 / A/swine/Korea/C13/2008(H5N2) / 3568 / 100% / 94%
69 / FJ517309.1 / A/mallard/Minnesota/192/1999(H4N6) / 3568 / 100% / 94%
70 / EU399758.1 / A/Ontario/1252/2007(H3N2) / 3568 / 100% / 94%
71 / CY035414.1 / A/swine/Minnesota/SG-00234/2005(H3N2) / 3565 / 98% / 95%
72 / CY035439.1 / A/swine/Minnesota/SG-00242/2006(H3N2) / 3563 / 98% / 95%
73 / DQ145540.1 / A/swine/Minnesota/00395/2004(H3N1) / 3563 / 100% / 94%
74 / CY035417.1 / A/swine/Minnesota/SG-00235/2007(H3N2) / 3557 / 98% / 95%
75 / EU743535.1 / A/mallard/MN/280/1999(H3N5) / 3557 / 100% / 94%
76 / CY013870.1 / A/green-winged teal/Ohio/178/1999(H6N2) / 3557 / 100% / 94%
77 / CY013262.1 / A/pintail/Ohio/226/1998(H6N2) / 3557 / 100% / 94%
78 / EU409946.1 / A/swine/Ohio/24366/07(H1N1) / 3554 / 99% / 94%
79 / FJ686753.1 / A/mallard/Maryland/226/2001(H2N3) / 3552 / 100% / 94%
80 / FJ686761.1 / A/mallard/Maryland/228/2001(H2N3) / 3552 / 100% / 94%
81 / FJ686793.1 / A/mallard/Maryland/234/2001(H2N3) / 3552 / 100% / 94%
82 / CY035433.1 / A/swine/Minnesota/SG-00240/2007(H1N1) / 3552 / 98% / 95%
83 / CY035423.1 / A/swine/Minnesota/SG-00237/2007(H3N2) / 3552 / 98% / 95%
84 / EU258942.1 / A/swine/Missouri/2124514/2006(H2N3) / 3552 / 100% / 94%
85 / CY020876.1 / A/mallard/Ohio/217/1998(H6N8) / 3552 / 100% / 94%
86 / AY703829.1 / A/guillemot/Sweden/3/00(H6N2) / 3552 / 100% / 94%
87 / FJ686769.1 / A/mallard/Maryland/231/2001(H2N3) / 3546 / 100% / 94%
88 / FJ686785.1 / A/mallard/Maryland/233/2001(H2N3) / 3546 / 100% / 94%
89 / CY018006.1 / A/blue-winged teal/Ohio/31/1999(H3N2) / 3546 / 100% / 94%
90 / CY035436.1 / A/swine/Minnesota/SG-00241/2007(H1N1) / 3541 / 98% / 95%
91 / EU258950.1 / A/swine/Missouri/4296424/2006(H2N3) / 3541 / 100% / 94%
92 / CY005317.1 / A/mallard/ALB/126/1991(H11N9) / 3541 / 100% / 94%
93 / CY035445.1 / A/swine/Illinois/SG-00244/2007(H1N1) / 3539 / 98% / 95%
Blast target sequences of segment 2 PB1 gene (Query: FJ966080)
Accession / Description / Max score / Query coverage / Max identityFJ966080.1 / A/California/04/2009(H1N1) / 4200 / 100% / 100%
FJ969531.1 / A/California/07/2009(H1N1) / 4194 / 100% / 99%
FJ966978.1 / A/California/07/2009(H1N1) / 4194 / 100% / 99%
FJ969526.1 / A/Texas/04/2009(H1N1) / 4189 / 100% / 99%
FJ969522.1 / A/Texas/05/2009(H1N1) / 4189 / 100% / 99%
FJ966958.1 / A/California/05/2009(H1N1) / 4189 / 100% / 99%
FJ966965.1 / A/California/06/2009(H1N1) / 4183 / 100% / 99%
1 / AF342823.1 / A/Wisconsin/10/98 (H1N1) / 3807 / 100% / 96%
2 / AF250130.1 / A/Swine/Indiana/9K035/99 (H1N2) / 3759 / 100% / 96%
3 / CY033790.1 / A/mallard duck/South Dakota/Sg-00125/2007(H3N2) / 3746 / 99% / 96%
4 / AF251429.1 / A/Swine/Minnesota/593/99 (H3N2) / 3746 / 100% / 96%
5 / AF251421.1 / A/Swine/Iowa/569/99 (H3N2) / 3746 / 100% / 96%
6 / AF251413.1 / A/Swine/Iowa/533/99 (H3N2) / 3746 / 100% / 96%
7 / AF251405.1 / A/Swine/Nebraska/209/98 (H3N2) / 3746 / 100% / 96%
8 / EU798910.1 / A/swine/Korea/CAN04/2005(H3N2) / 3735 / 100% / 96%
9 / AY233388.1 / A/duck/NC/91347/01(H1N2) / 3735 / 100% / 96%
10 / AF455729.1 / A/Swine/Illinois/100085A/01 (H1N2) / 3735 / 100% / 96%
11 / AF455723.1 / A/Swine/Ohio/891/01(H1N2) / 3729 / 100% / 96%
12 / EU798914.1 / A/swine/Korea/CY05/2007(H3N2) / 3723 / 100% / 96%
13 / EU798913.1 / A/swine/Korea/CY04/2007(H3N2) / 3723 / 100% / 96%
14 / AF455727.1 / A/Swine/Iowa/930/01(H1N2) / 3723 / 100% / 96%
15 / EU798912.1 / A/swine/Korea/CAS09/2006(H3N2) / 3720 / 100% / 96%
16 / EU798911.1 / A/swine/Korea/CAS07/2005(H3N2) / 3720 / 100% / 96%
17 / AF455730.1 / A/Swine/Illinois/100084/01 (H1N2) / 3718 / 100% / 96%
18 / AF455728.1 / A/Swine/Indiana/P12439/00 (H1N2) / 3718 / 100% / 96%
19 / AY129162.1 / A/Swine/Korea/CY02/02(H1N2) / 3712 / 100% / 96%
20 / EU301400.2 / A/swine/Korea/JNS06/2004(H3N2) / 3707 / 100% / 96%
21 / AF455726.1 / A/Swine/Minnesota/55551/00 (H1N2) / 3701 / 100% / 96%
22 / AF455724.1 / A/Swine/North Carolina/98225/01(H1N2) / 3701 / 100% / 96%
23 / U71131.1 / A/Miyagi/29/95(H3N2) / 3696 / 100% / 96%
24 / CY038509.1 / A/Siena/3/1995(H3N2) / 3690 / 100% / 95%
25 / AF455725.1 / A/Swine/North Carolina/93523/01 (H1N2) / 3690 / 100% / 95%
26 / U71130.1 / H3N2 A/Shiga/20/95 / 3690 / 100% / 95%
27 / CY012222.1 / A/New York/639/1995(H3N2) / 3685 / 100% / 95%
28 / CY011462.1 / A/New York/636/1996(H3N2) / 3685 / 100% / 95%
29 / CY010730.1 / A/New York/634/1995(H3N2) / 3685 / 100% / 95%
30 / CY011438.1 / A/New York/624/1996(H3N2) / 3679 / 100% / 95%
31 / EU409954.1 / A/swine/Ohio/75004/04(H1N1) / 3674 / 100% / 95%
32 / CY012974.1 / A/New York/735/1994(H3N2) / 3674 / 100% / 95%
33 / CY012750.1 / A/New York/771/1993(H3N2) / 3674 / 100% / 95%
34 / CY011894.1 / A/New York/716/1994(H3N2) / 3674 / 100% / 95%
35 / CY011454.1 / A/New York/635/1996(H3N2) / 3674 / 100% / 95%
36 / CY010714.1 / A/New York/628/1995(H3N2) / 3674 / 100% / 95%
37 / CY010682.1 / A/New York/618/1995(H3N2) / 3674 / 100% / 95%
38 / CY010674.1 / A/New York/613/1996(H3N2) / 3674 / 100% / 95%
39 / CY010666.1 / A/New York/612/1995(H3N2) / 3674 / 100% / 95%
40 / CY010658.1 / A/New York/611/1995(H3N2) / 3674 / 100% / 95%
41 / EU798917.1 / A/swine/Korea/CY10/2007(H3N2) / 3668 / 100% / 95%
42 / EU798898.1 / A/swine/Korea/CAN01/2004(H1N1) / 3668 / 100% / 95%
43 / EF551051.1 / A/swine/North Carolina/2003(H3N2) / 3668 / 100% / 95%
44 / CY013707.1 / A/New York/789/1993(H3N2) / 3668 / 100% / 95%
45 / CY013683.1 / A/New York/784/1993(H3N2) / 3668 / 100% / 95%
46 / CY012766.1 / A/New York/777/1993(H3N2) / 3668 / 100% / 95%
47 / CY011470.1 / A/New York/641/1996(H3N2) / 3668 / 100% / 95%
48 / CY010818.1 / A/New York/623/1995(H3N2) / 3668 / 100% / 95%
49 / AF037420.1 / H3N2 A/Niigata/137/96 / 3668 / 100% / 95%
50 / CY016489.1 / A/New York/800/1993(H3N2) / 3663 / 100% / 95%
51 / CY013771.1 / A/New York/799/1993(H3N2) / 3663 / 100% / 95%
52 / CY013747.1 / A/New York/795/1993(H3N2) / 3663 / 100% / 95%
53 / CY013731.1 / A/New York/792/1993(H3N2) / 3663 / 100% / 95%
54 / CY013715.1 / A/New York/790/1993(H3N2) / 3663 / 100% / 95%
55 / CY013667.1 / A/New York/776/1993(H3N2) / 3663 / 100% / 95%
56 / CY013659.1 / A/New York/774/1993(H3N2) / 3663 / 100% / 95%
57 / CY013651.1 / A/New York/773/1993(H3N2) / 3663 / 100% / 95%
58 / CY013643.1 / A/New York/772/1993(H3N2) / 3663 / 100% / 95%
59 / CY014157.1 / A/New York/796/1993(H3N2) / 3663 / 100% / 95%
60 / CY013611.1 / A/New York/757/1993(H3N2) / 3663 / 100% / 95%
61 / CY012734.1 / A/New York/767/1993(H3N2) / 3663 / 100% / 95%
62 / CY012174.1 / A/New York/763/1993(H3N2) / 3663 / 100% / 95%
63 / CY012158.1 / A/New York/761/1993(H3N2) / 3663 / 100% / 95%
64 / CY012142.1 / A/New York/759/1993(H3N2) / 3663 / 100% / 95%
65 / DQ145544.1 / A/swine/Minnesota/00395/2004(H3N1) / 3663 / 100% / 95%
66 / CY010722.1 / A/New York/631/1996(H3N2) / 3663 / 100% / 95%
67 / CY011822.1 / A/New York/652/1996(H3N2) / 3661 / 99% / 95%
68 / CY013214.1 / A/New York/785/1993(H3N2) / 3659 / 99% / 95%
69 / CY036909.1 / A/Shangdong/9/1993(H3N2) / 3657 / 100% / 95%
70 / EU798915.1 / A/swine/Korea/CY07/2007(H3N2) / 3657 / 100% / 95%
71 / CY013699.1 / A/New York/788/1993(H3N2) / 3657 / 100% / 95%
72 / CY013675.1 / A/New York/780/1993(H3N2) / 3657 / 100% / 95%
73 / CY014149.1 / A/New York/793/1993(H3N2) / 3657 / 100% / 95%
74 / CY012782.1 / A/New York/779/1993(H3N2) / 3657 / 100% / 95%
75 / CY012774.1 / A/New York/778/1993(H3N2) / 3657 / 100% / 95%
76 / CY012758.1 / A/New York/775/1993(H3N2) / 3657 / 100% / 95%
77 / CY012742.1 / A/New York/770/1993(H3N2) / 3657 / 100% / 95%
78 / CY012166.1 / A/New York/762/1993(H3N2) / 3657 / 100% / 95%
79 / CY003758.2 / A/Nanchang/0074/94(H3N2) / 3657 / 100% / 95%
80 / CY009018.1 / A/Nanchang/12/93(H3N2) / 3657 / 100% / 95%
81 / CY006337.1 / A/Nanchang/A2/94(H3N2) / 3657 / 100% / 95%
82 / CY007841.1 / A/Nanchang/A1/94(H3N2) / 3657 / 100% / 95%
83 / CY006353.1 / A/Nanchang/58/93(H3N2) / 3657 / 100% / 95%
84 / CY013723.1 / A/New York/791/1993(H3N2) / 3651 / 100% / 95%
85 / CY013691.1 / A/New York/787/1993(H3N2) / 3651 / 100% / 95%
86 / CY013182.1 / A/New York/755/1993(H3N2) / 3651 / 100% / 95%
87 / CY012790.1 / A/New York/786/1993(H3N2) / 3651 / 100% / 95%
88 / CY012190.1 / A/New York/765/1993(H3N2) / 3651 / 100% / 95%
89 / CY012150.1 / A/New York/760/1993(H3N2) / 3651 / 100% / 95%
90 / CY012126.1 / A/New York/756/1993(H3N2) / 3651 / 100% / 95%
91 / CY006345.1 / A/Nanchang/0058/94(H3N2) / 3651 / 100% / 95%
92 / EU798899.1 / A/swine/Korea/CAS08/2005(H1N1) / 3646 / 100% / 95%
93 / CY013795.1 / A/New York/803/1993(H3N2) / 3646 / 100% / 95%
Blast target sequences of segment 3 PA gene (Query: FJ966081)
Accession / Description / Max score / Query coverage / Max identFJ969529.1 / A/California/07/2009(H1N1) / 3973 / 100% / 100%
FJ969515.1 / A/California/04/2009(H1N1) / 3973 / 100% / 100%
FJ966977.1 / A/California/07/2009(H1N1) / 3973 / 100% / 100%
FJ966081.1 / A/California/04/2009(H1N1) / 3973 / 100% / 100%
FJ969539.1 / A/California/07/2009(H1N1) / 3969 / 100% / 99%
FJ969524.1 / A/Texas/04/2009(H1N1) / 3956 / 100% / 99%
FJ966970.1 / A/Texas/05/2009(H1N1) / 3956 / 100% / 99%
FJ966964.1 / A/California/06/2009(H1N1) / 3951 / 100% / 99%
FJ966957.1 / A/California/05/2009(H1N1) / 3951 / 100% / 99%
1 / AF455722.1 / A/Swine/Illinois/100084/01 (H1N2) / 3507 / 100% / 96%
2 / AF251433.1 / A/Swine/Minnesota/593/99 (H3N2) / 3507 / 100% / 96%
3 / AF251425.1 / A/Swine/Iowa/569/99 (H3N2) / 3507 / 100% / 96%
4 / AF251417.1 / A/Swine/Iowa/533/99 (H3N2) / 3507 / 100% / 96%
5 / AF251409.1 / A/Swine/Nebraska/209/98 (H3N2) / 3507 / 100% / 96%
6 / CY033792.1 / A/pintail duck/South Dakota/Sg-00126/2007(H3N2) / 3502 / 98% / 96%
7 / CY033795.1 / A/mallard duck/South Dakota/Sg-00128/2007 / 3500 / 98% / 96%
8 / AF455718.1 / A/Swine/Minnesota/55551/00 (H1N2) / 3496 / 100% / 96%
9 / AF455717.1 / A/Swine/North Carolina/93523/01 (H1N2) / 3480 / 100% / 95%
10 / CY033791.1 / A/mallard duck/South Dakota/Sg-00125/2007(H3N2) / 3476 / 98% / 96%
11 / AY129161.1 / A/Swine/Korea/CY02/02(H1N2) / 3474 / 100% / 95%
12 / AF455720.1 / A/Swine/Indiana/P12439/00 (H1N2) / 3474 / 100% / 95%
13 / AY233389.1 / A/duck/NC/91347/01(H1N2) / 3469 / 100% / 95%
14 / AF455716.1 / A/Swine/North Carolina/98225/01(H1N2) / 3463 / 100% / 95%
15 / EU798894.1 / A/swine/Korea/CY05/2007(H3N2) / 3458 / 100% / 95%
16 / EU798893.1 / A/swine/Korea/CY04/2007(H3N2) / 3458 / 100% / 95%
17 / AF455721.1 / A/Swine/Illinois/100085A/01 (H1N2) / 3456 / 100% / 95%
18 / EU798896.1 / A/swine/Korea/CY09/2007(H3N2) / 3446 / 100% / 95%
19 / EF551052.1 / A/swine/North Carolina/2003(H3N2) / 3446 / 100% / 95%
20 / EU798889.1 / A/swine/Korea/CAS05/2004(H3N2) / 3435 / 100% / 95%
21 / EU798880.1 / A/swine/Korea/Hongsong2/2004(H1N2) / 3435 / 100% / 95%
22 / EU301368.2 / A/swine/Korea/JNS06/2004(H3N2) / 3430 / 100% / 95%
23 / EU798892.1 / A/swine/Korea/CAS09/2006(H3N2) / 3430 / 100% / 95%
24 / EU798887.1 / A/swine/Korea/PZ14/2006(H1N2) / 3430 / 100% / 95%
25 / EU798886.1 / A/swine/Korea/PZ7/2006(H1N2) / 3430 / 100% / 95%
26 / EU798885.1 / A/swine/Korea/PZ4/2006(H1N2) / 3430 / 100% / 95%
27 / EU798882.1 / A/swine/Korea/JL02/2005(H1N2) / 3430 / 100% / 95%
28 / EU798891.1 / A/swine/Korea/CAS07/2005(H3N2) / 3419 / 100% / 95%
29 / EU798890.1 / A/swine/Korea/CAN04/2005(H3N2) / 3419 / 100% / 95%
30 / DQ889684.1 / A/Iowa/CEID23/2005(H1N1) / 3419 / 100% / 95%
31 / EU798884.1 / A/swine/Korea/Asan04/2006(H1N2) / 3413 / 100% / 95%
32 / EU798883.1 / A/swine/Korea/JL04/2005(H1N2) / 3413 / 100% / 95%
33 / EU798881.1 / A/swine/Korea/JL01/2005(H1N2) / 3413 / 100% / 95%
34 / EU798879.1 / A/swine/Korea/CAS08/2005(H1N1) / 3413 / 100% / 95%
35 / EU798878.1 / A/swine/Korea/CAN01/2004(H1N1) / 3413 / 100% / 95%
36 / AF250129.1 / A/Swine/Indiana/9K035/99 (H1N2) / 3413 / 100% / 95%
37 / AF455719.1 / A/Swine/Iowa/930/01(H1N2) / 3397 / 100% / 95%
38 / AF455715.1 / A/Swine/Ohio/891/01(H1N2) / 3397 / 100% / 95%
39 / CY033793.1 / A/mallard duck/South Dakota/Sg-00127/2007(H3N2) / 3395 / 96% / 96%
40 / EU743215.1 / A/turkey/MN/366767/2005(H3N2) / 3374 / 100% / 94%
41 / EU735823.1 / A/turkey/OH/313053/2004(H3N2) / 3374 / 100% / 94%
42 / DQ469981.1 / A/swine/Manitoba/12707/2005(H3N2) / 3363 / 100% / 94%
43 / DQ335776.1 / A/turkey/Ohio/313053/04(H3N2) / 3363 / 100% / 94%
44 / EU015991.1 / A/swine/Guangxi/13/2006(H1N2) / 3358 / 99% / 94%
45 / DQ145539.1 / A/swine/Minnesota/00395/2004(H3N1) / 3358 / 100% / 94%
46 / FJ374517.1 / A/swine/Shanghai/1/2007(H1N2) / 3352 / 99% / 94%
47 / DQ923517.1 / A/swine/Korea/CN22/2006(H3N1) / 3352 / 100% / 94%
48 / DQ923516.1 / A/swine/Korea/PZ72-1/2006(H3N1) / 3352 / 100% / 94%
49 / DQ469965.1 / A/swine/Alberta/14722/2005(H3N2) / 3352 / 100% / 94%
50 / FJ461603.1 / A/swine/Korea/C13/2008(H5N2) / 3347 / 100% / 94%
51 / EU798897.1 / A/swine/Korea/CY10/2007(H3N2) / 3347 / 100% / 94%
52 / EU735831.1 / A/turkey/NC/353568/2005(H3N2) / 3347 / 100% / 94%
53 / DQ469989.1 / A/swine/Ontario/33853/2005(H3N2) / 3341 / 100% / 94%
54 / DQ469997.1 / A/turkey/Ontario/31232/2005(H3N2) / 3336 / 100% / 94%
55 / DQ469957.1 / A/Ontario/RV1273/2005(H3N2) / 3336 / 100% / 94%
56 / DQ150424.1 / A/swine/MI/PU243/04 (H3N1) / 3336 / 100% / 94%
57 / EF551044.1 / A/turkey/Illinois/2004(H3N2) / 3330 / 100% / 94%
58 / DQ469973.1 / A/swine/British Columbia/28103/2005(H3N2) / 3325 / 100% / 94%
59 / DQ150432.1 / A/swine/IN/PU542/04 (H3N1) / 3325 / 100% / 94%
60 / CY004543.1 / A/blue-winged teal/Alberta/141/1992(H1N1) / 3325 / 100% / 94%
61 / CY005425.1 / A/sanderling/DE/1258/1986(H6N6) / 3308 / 100% / 94%
62 / EU604693.1 / A/swine/OH/511445/2007(H1N1) / 3291 / 100% / 94%
63 / CY035444.1 / A/swine/Minnesota/SG-00243/2006(H3N2) / 3288 / 99% / 94%
64 / CY035429.1 / A/swine/Minnesota/SG-00238/2006(H1N1) / 3286 / 99% / 94%
65 / EU742878.1 / A/rhea/North Carolina/39482/1993(H7N1) / 3286 / 100% / 94%
66 / CY004294.1 / A/mallard duck/ALB/65/1976(H1N1) / 3286 / 100% / 94%
67 / AF156456.1 / A/Quail/Arkansas/29209-1/93(H9N2) / 3284 / 99% / 94%
68 / EU798888.1 / A/swine/Korea/CY08/2007(H1N2) / 3280 / 100% / 94%
69 / FJ517319.1 / A/mallard/MN/327/1999(H4N8) / 3269 / 100% / 94%
70 / CY035441.1 / A/swine/Minnesota/SG-00242/2006(H3N2) / 3269 / 98% / 94%
71 / CY035435.1 / A/swine/Minnesota/SG-00240/2007(H1N1) / 3264 / 99% / 94%
72 / CY035425.1 / A/swine/Minnesota/SG-00237/2007(H3N2) / 3264 / 99% / 94%
73 / EU871889.1 / A/mallard/MN/269/1999(H4N6) / 3264 / 100% / 94%
74 / EU399756.1 / A/Ontario/1252/2007(H3N2) / 3258 / 100% / 94%
75 / CY005322.1 / A/mallard/Alberta/125/1999(H11N6) / 3253 / 100% / 93%
76 / CY004126.1 / A/mallard duck/ALB/676/1979(H3N6) / 3253 / 100% / 93%
77 / EU409947.1 / A/swine/Ohio/24366/07(H1N1) / 3251 / 98% / 94%
78 / CY035438.1 / A/swine/Minnesota/SG-00241/2007(H1N1) / 3247 / 99% / 94%
79 / CY035432.1 / A/swine/Minnesota/SG-00239/2007(H1N2) / 3247 / 98% / 94%
80 / CY035447.1 / A/swine/Illinois/SG-00244/2007(H1N1) / 3245 / 98% / 94%
81 / CY005341.1 / A/pintail duck/ALB/306/1983(H12N5) / 3241 / 100% / 93%
82 / CY004951.1 / A/pintail/Alberta/269/2001(H4N6) / 3241 / 100% / 93%
83 / CY035418.1 / A/swine/Minnesota/SG-00235/2007(H3N2) / 3232 / 98% / 94%
84 / CY005328.1 / A/pintail/Alberta/84/2000(H11N9) / 3232 / 99% / 93%
85 / CY004992.1 / A/pintail duck/Alberta/114/1979(H8N4) / 3230 / 100% / 93%
86 / CY004958.1 / A/blue-winged teal/Alberta/293/2003(H4N6) / 3230 / 100% / 93%
87 / CY004851.1 / A/blue-winged teal/ALB/562/1985(H4N6) / 3230 / 100% / 93%
88 / CY016161.1 / A/gadwall/Ohio/37/1999(H6N2) / 3225 / 100% / 93%
89 / CY035421.1 / A/swine/Minnesota/SG-00236/2007(H3N2) / 3221 / 98% / 94%
90 / CY017866.1 / A/northern shoveler/Ohio/454/1987(H3N8) / 3214 / 100% / 93%
91 / CY004930.1 / A/mallard/ALB/47/1998(H4N1) / 3214 / 100% / 93%
Blast target sequences of segment 4 HA gene (Query: FJ966082)
Accession / Description / Max score / Query coverage / Max identFJ966082.1 / A/California/04/2009(H1N1) / 3142 / 100% / 100%
FJ966974.1 / A/California/07/2009(H1N1) / 3136 / 100% / 99%
FJ969540.1 / A/California/07/2009(H1N1) / 3129 / 100% / 99%
FJ969511.1 / A/California/10/2009(H1N1) / 3114 / 100% / 99%
FJ966952.1 / A/California/05/2009(H1N1) / 3114 / 100% / 99%
FJ969509.1 / A/New York/19/2009(H1N1) / 3109 / 100% / 99%
FJ966982.1 / A/Texas/04/2009(H1N1) / 3109 / 100% / 99%
FJ966960.1 / A/California/06/2009(H1N1) / 3109 / 100% / 99%
FJ966959.1 / A/Texas/05/2009(H1N1) / 3109 / 100% / 99%
1 / AF455680.1 / A/Swine/Indiana/P12439/00 (H1N2) / 2699 / 100% / 95%
2 / AF250124.1 / A/Swine/Indiana/9K035/99 (H1N2) / 2687 / 100% / 95%
3 / AY038014.1 / A/Turkey/MO/24093/99(H1N2) / 2671 / 100% / 95%
4 / EU139828.1 / A/swine/Minnesota/1192/2001(H1N2) / 2665 / 100% / 94%
5 / AF455675.1 / A/Swine/Ohio/891/01(H1N2) / 2660 / 100% / 94%
6 / EF556201.1 / A/swine/Guangxi/17/2005(H1N2) / 2654 / 100% / 94%
7 / AY060047.1 / A/SW/MN/23124-T/01(H1N2) / 2654 / 100% / 94%
8 / AY060050.1 / A/SW/MN/16419/01(H1N2) / 2643 / 100% / 94%
9 / AY060048.1 / A/SW/MN/23124-S/01(H1N2) / 2643 / 100% / 94%
10 / AF455681.1 / A/Swine/Illinois/100085A/01 (H1N2) / 2638 / 100% / 94%
11 / AF455682.1 / A/Swine/Illinois/100084/01 (H1N2) / 2621 / 100% / 94%
12 / EF556199.1 / A/swine/Guangxi/13/2006(H1N2) / 2610 / 100% / 94%
13 / EU139830.1 / A/swine/Minnesota/00194/2003(H1N2) / 2604 / 100% / 94%
14 / EU139831.1 / A/swine/Kansas/00246/2004(H1N2) / 2571 / 100% / 93%
15 / EU604689.1 / A/swine/OH/511445/2007(H1N1) / 2555 / 100% / 93%
16 / AF455677.1 / A/Swine/North Carolina/93523/01 (H1N2) / 2534 / 100% / 93%
17 / DQ666933.1 / A/swine/Korea/S11/2005(H1N2) / 2518 / 99% / 93%
18 / CY035070.1 / A/swine/Memphis/1/1990(H1N1) / 2488 / 100% / 93%
19 / CY022477.1 / A/swine/Maryland/23239/1991(H1N1) / 2477 / 100% / 92%
20 / EU798785.1 / A/swine/Korea/PZ4/2006(H1N2) / 2468 / 99% / 92%
21 / EU798780.1 / A/swine/Korea/Hongsong2/2004(H1N2) / 2466 / 99% / 92%
22 / CY028780.1 / A/swine/California/T9001707/1991(H1N1) / 2466 / 100% / 92%
23 / CY027155.1 / A/swine/Iowa/24297/1991(H1N1) / 2466 / 100% / 92%
24 / EU798781.1 / A/swine/Korea/JL01/2005(H1N2) / 2464 / 99% / 92%
25 / EU798787.1 / A/swine/Korea/PZ14/2006(H1N2) / 2462 / 99% / 92%
26 / EU798786.1 / A/swine/Korea/PZ7/2006(H1N2) / 2462 / 99% / 92%
27 / EU409960.1 / A/swine/Ohio/C62006/06(H1N1) / 2460 / 97% / 93%
28 / EU798784.1 / A/swine/Korea/Asan04/2006(H1N2) / 2459 / 99% / 92%
29 / EU798783.1 / A/swine/Korea/JL04/2005(H1N2) / 2459 / 99% / 92%
30 / EU798782.1 / A/swine/Korea/JL02/2005(H1N2) / 2459 / 99% / 92%
31 / EU798788.1 / A/swine/Korea/CY08/2007(H1N2) / 2457 / 99% / 92%
32 / EU743159.1 / A/turkey/IA/21089-3/1992(H1N1) / 2455 / 100% / 92%
33 / EU409948.1 / A/swine/Ohio/24366/07(H1N1) / 2435 / 95% / 93%
34 / EU735786.1 / A/turkey/NC/19762/1988(H1N1) / 2405 / 100% / 92%
35 / CY022333.1 / A/swine/Iowa/17672/1988(H1N1) / 2405 / 100% / 92%
36 / FJ357104.1 / A/turkey/NC/17026/1988(H1N1) / 2399 / 100% / 92%
37 / CY022429.1 / A/swine/Wisconsin/1915/1988(H1N1) / 2399 / 100% / 92%
38 / CY022970.1 / A/swine/Iowa/31483/1988(H1N1) / 2394 / 100% / 92%
39 / U53163.1 / A/WI/4755/1994(H1N1) / 2394 / 100% / 92%
40 / U53162.1 / A/WI/4754/1994(H1N1) / 2394 / 100% / 92%
41 / L24362.1 / A/MD/12/1991(H1N1) / 2394 / 100% / 92%
42 / CY024925.1 / A/Ohio/3559/1988(H1N1) / 2388 / 100% / 92%
43 / AF455679.1 / A/Swine/Iowa/930/01(H1N2) / 2388 / 100% / 92%
44 / M81707.1 / A/Swine/Indiana/1726/1988(H1N1) / 2383 / 100% / 92%
45 / CY025010.1 / A/swine/Kansas/3024/1987(H1N1) / 2372 / 100% / 91%
46 / CY022469.1 / A/swine/Kansas/3228/1987(H1N1) / 2372 / 100% / 91%
47 / CY027507.1 / A/swine/Iowa/2/1985(H1N1) / 2366 / 100% / 91%
48 / CY022325.1 / A/swine/Iowa/3/1985(H1N1) / 2366 / 100% / 91%
49 / CY022317.1 / A/swine/Iowa/1/1985(H1N1) / 2361 / 100% / 91%
50 / EU798779.1 / A/swine/Korea/CAS08/2005(H1N1) / 2355 / 100% / 91%
51 / EU139827.1 / A/swine/Minnesota/37866/1999(H1N1) / 2355 / 100% / 91%
52 / AY060046.1 / A/SW/CO/17871/01(H1N2) / 2350 / 100% / 91%
53 / AY060049.1 / A/SW/MO/1877/01(H1N2) / 2344 / 100% / 91%
54 / AY129156.1 / A/Swine/Korea/CY02/02(H1N2) / 2338 / 100% / 91%
55 / EU798778.1 / A/swine/Korea/CAN01/2004(H1N1) / 2333 / 100% / 91%
56 / CY022962.1 / A/swine/Iowa/1/1987(H1N1) / 2333 / 100% / 91%
57 / FJ789832.1 / A/swine/Shanghai/3/2005(H1N1) / 2327 / 100% / 91%
58 / EU139832.1 / A/swine/Iowa/00239/2004(H1N1) / 2327 / 100% / 91%
59 / EU502885.1 / A/swine/Shanghai/2/2005(H1N1) / 2322 / 100% / 91%
60 / AF222034.1 / A/Swine/Wisconsin/457/98(H1N1) / 2322 / 100% / 91%
61 / AF222031.1 / A/Swine/Wisconsin/168/97(H1N1) / 2322 / 100% / 91%
62 / AF222028.1 / A/Swine/Wisconsin/163/97(H1N1) / 2322 / 100% / 91%
63 / AF222030.1 / A/Swine/Wisconsin/166/97(H1N1) / 2316 / 100% / 91%
64 / AF222029.1 / A/Swine/Wisconsin/164/97(H1N1) / 2316 / 100% / 91%
65 / AY233393.1 / A/duck/NC/91347/01(H1N2) / 2311 / 100% / 91%
66 / DQ058215.1 / A/swine/Guangdong/2/01(H1N1) / 2309 / 99% / 91%
67 / EU139829.1 / A/swine/North Carolina/36883/2002(H1N1) / 2305 / 100% / 91%
68 / AF222036.1 / A/Swine/Wisconsin/464/98(H1N1) / 2305 / 100% / 91%
69 / AF222035.1 / A/Swine/Wisconsin/458/98(H1N1) / 2305 / 100% / 91%
70 / AF222033.1 / A/Swine/Wisconsin/238/97(H1N1) / 2305 / 100% / 91%
71 / AF222032.1 / A/Swine/Wisconsin/235/97(H1N1) / 2305 / 100% / 91%
72 / EU502884.1 / A/swine/Shanghai/1/2005(H1N1) / 2300 / 100% / 91%
73 / CY028788.1 / A/swine/Iowa/1/1986(H1N1) / 2300 / 100% / 91%
74 / AY060051.1 / A/SW/MN/34893/01(H1N2) / 2300 / 100% / 91%
75 / AF455676.1 / A/Swine/North Carolina/98225/01(H1N2) / 2300 / 100% / 91%
76 / DQ889689.1 / A/Iowa/CEID23/2005(H1N1) / 2298 / 99% / 91%
77 / AF455678.1 / A/Swine/Minnesota/55551/00 (H1N2) / 2289 / 100% / 90%
78 / AF222027.1 / A/Swine/Wisconsin/136/97(H1N1) / 2289 / 100% / 90%
79 / AF222026.1 / A/Swine/Wisconsin/125/97(H1N1) / 2283 / 100% / 90%
80 / AY060052.1 / A/SW/MN/17138/01(H1N2) / 2255 / 100% / 90%
81 / EF556203.1 / A/swine/Hainan/1/2005(H1N2) / 2250 / 100% / 90%
82 / FJ750522.1 / A/ferret/Iowa/15828B/2008(H1N1) / 2239 / 100% / 90%
83 / CY028171.1 / A/swine/Iowa/2/1987(H1N1) / 2239 / 100% / 90%
84 / AY852271.1 / A/swine/Guangdong/711/2001(H1N1) / 2235 / 97% / 91%
85 / U46783.1 / A/swine/Beijing/47/1991(H1N1) / 2231 / 93% / 91%
86 / DQ139320.1 / A/swine/Zhejiang/1/2004(H1N2) / 2213 / 99% / 90%
87 / U11857.1 / A/swine/St-Hyacinthe/106/1991(H1) / 2206 / 100% / 90%
88 / DQ280250.1 / A/swine/Ontario/11112/04(H1N1) / 2189 / 100% / 89%
89 / FJ374511.1 / A/swine/Shanghai/1/2007(H1N2) / 2183 / 100% / 89%
90 / CY027515.1 / A/swine/Tennessee/5/1978(H1N1) / 2172 / 100% / 89%
91 / CY024978.1 / A/swine/Tennessee/88/1977(H1N1) / 2172 / 100% / 89%
Blast target sequences of segment 5 NP gene (Query: FJ966083)
Accession / Description / Max score / Query coverage / Max identFJ969512.1 / A/California/04/2009(H1N1) / 2765 / 100% / 100%
FJ966979.1 / A/Texas/04/2009(H1N1) / 2765 / 100% / 100%
FJ966967.1 / A/Texas/05/2009(H1N1) / 2765 / 100% / 100%
FJ966083.1 / A/California/04/2009(H1N1) / 2765 / 100% / 100%
FJ966961.1 / A/California/06/2009(H1N1) / 2760 / 100% / 99%
FJ969536.1 / A/California/07/2009(H1N1) / 2756 / 100% / 99%
FJ966953.1 / A/California/05/2009(H1N1) / 2748 / 100% / 99%
1 / AF251415.2 / A/Swine/Iowa/533/99 (H3N2) / 2499 / 100% / 96%
2 / EU798854.1 / A/swine/Korea/CY05/2007(H3N2) / 2494 / 100% / 96%
3 / EU798853.1 / A/swine/Korea/CY04/2007(H3N2) / 2494 / 100% / 96%
4 / EU798856.1 / A/swine/Korea/CY09/2007(H3N2) / 2488 / 100% / 96%
5 / AF455704.1 / A/Swine/Indiana/P12439/00 (H1N2) / 2488 / 100% / 96%
6 / AF251423.2 / A/Swine/Iowa/569/99 (H3N2) / 2483 / 100% / 96%
7 / EU301304.2 / A/swine/Korea/JNS06/2004(H3N2) / 2477 / 100% / 96%
8 / AF455699.1 / A/Swine/Ohio/891/01(H1N2) / 2477 / 100% / 96%
9 / AF251431.2 / A/Swine/Minnesota/593/99 (H3N2) / 2471 / 100% / 96%
10 / EU798852.1 / A/swine/Korea/CAS09/2006(H3N2) / 2466 / 100% / 96%
11 / EU798850.1 / A/swine/Korea/CAN04/2005(H3N2) / 2466 / 100% / 96%
12 / AF250127.1 / A/Swine/Indiana/9K035/99 (H1N2) / 2466 / 100% / 96%
13 / AF455702.1 / A/Swine/Minnesota/55551/00 (H1N2) / 2460 / 100% / 96%
14 / AF342819.1 / A/Wisconsin/10/98 (H1N1) / 2460 / 100% / 96%
15 / EU798851.1 / A/swine/Korea/CAS07/2005(H3N2) / 2455 / 100% / 96%
16 / AF455706.1 / A/Swine/Illinois/100084/01 (H1N2) / 2455 / 100% / 96%
17 / AF455705.1 / A/Swine/Illinois/100085A/01 (H1N2) / 2455 / 100% / 96%
18 / EU798849.1 / A/swine/Korea/CAS05/2004(H3N2) / 2449 / 100% / 96%
19 / FJ374515.1 / A/swine/Shanghai/1/2007(H1N2) / 2444 / 100% / 96%
20 / AF455701.1 / A/Swine/North Carolina/93523/01 (H1N2) / 2433 / 100% / 95%
21 / AF455700.1 / A/Swine/North Carolina/98225/01(H1N2) / 2423 / 99% / 95%
22 / EU850621.1 / A/swine/Guangxi/17/2005(H1N2) / 2422 / 100% / 95%
23 / EU798839.1 / A/swine/Korea/CAS08/2005(H1N1) / 2416 / 100% / 95%
24 / EU743162.1 / A/turkey/IA/21089-3/1992(H1N1) / 2416 / 100% / 95%
25 / EU015990.1 / A/swine/Guangxi/13/2006(H1N2) / 2416 / 100% / 95%
26 / AY233394.1 / A/duck/NC/91347/01(H1N2) / 2412 / 99% / 95%
27 / EU798838.1 / A/swine/Korea/CAN01/2004(H1N1) / 2410 / 100% / 95%
28 / DQ335774.1 / A/turkey/Ohio/313053/04(H3N2) / 2410 / 100% / 95%
29 / EU735821.1 / A/turkey/OH/313053/2004(H3N2) / 2405 / 100% / 95%
30 / CY028783.1 / A/swine/California/T9001707/1991(H1N1) / 2405 / 100% / 95%
31 / EF551054.1 / A/swine/North Carolina/2003(H3N2) / 2405 / 100% / 95%
32 / DQ150426.1 / A/swine/MI/PU243/04 (H3N1) / 2405 / 100% / 95%
33 / CY035073.1 / A/swine/Memphis/1/1990(H1N1) / 2399 / 100% / 95%
34 / CY024928.1 / A/Ohio/3559/1988(H1N1) / 2399 / 100% / 95%
35 / DQ469999.1 / A/turkey/Ontario/31232/2005(H3N2) / 2399 / 100% / 95%
36 / DQ469991.1 / A/swine/Ontario/33853/2005(H3N2) / 2399 / 100% / 95%
37 / DQ469959.1 / A/Ontario/RV1273/2005(H3N2) / 2399 / 100% / 95%
38 / AF455703.1 / A/Swine/Iowa/930/01(H1N2) / 2399 / 100% / 95%
39 / EU798857.1 / A/swine/Korea/CY10/2007(H3N2) / 2394 / 100% / 95%
40 / EU798855.1 / A/swine/Korea/CY07/2007(H3N2) / 2394 / 100% / 95%
41 / EU850624.1 / A/swine/Hainan/1/2005(H1N2) / 2394 / 100% / 95%
42 / DQ889686.1 / A/Iowa/CEID23/2005(H1N1) / 2394 / 100% / 95%
43 / DQ469983.1 / A/swine/Manitoba/12707/2005(H3N2) / 2394 / 100% / 95%
44 / DQ469967.1 / A/swine/Alberta/14722/2005(H3N2) / 2394 / 100% / 95%
45 / M63755.1 / A/Wisconsin/3523/1988(H1N1) / 2394 / 100% / 95%
46 / EU743154.1 / A/turkey/IA/10271-3/1990(H1N1) / 2388 / 100% / 95%
47 / EU743213.1 / A/turkey/MN/366767/2005(H3N2) / 2388 / 100% / 95%
48 / CY022336.1 / A/swine/Iowa/17672/1988(H1N1) / 2388 / 100% / 95%
49 / DQ469975.1 / A/swine/British Columbia/28103/2005(H3N2) / 2388 / 100% / 95%
50 / U49091.1 / A/swine/Beijing/94/1991(H1N1) / 2388 / 100% / 95%
51 / M76602.1 / A/Ohio/3523/1988(H1N1) / 2388 / 100% / 95%
52 / M63768.1 / A/swine/Iowa/17672/1988(H1N1) / 2388 / 100% / 95%
53 / DQ150434.1 / A/swine/IN/PU542/04 (H3N1) / 2379 / 100% / 95%
54 / EU697205.1 / A/turkey/Minnesota/366767/2005(H3N2) / 2377 / 100% / 95%
55 / CY027158.1 / A/swine/Iowa/24297/1991(H1N1) / 2377 / 100% / 95%
56 / AY129159.1 / A/Swine/Korea/CY02/02(H1N2) / 2377 / 100% / 95%
57 / EU735829.1 / A/turkey/NC/353568/2005(H3N2) / 2372 / 100% / 95%
58 / CY022480.1 / A/swine/Maryland/23239/1991(H1N1) / 2372 / 100% / 95%
59 / EU697210.1 / A/turkey/North Carolina/353568/2005(H3N2) / 2366 / 100% / 95%
60 / CY022973.1 / A/swine/Iowa/31483/1988(H1N1) / 2366 / 100% / 95%
61 / L24394.1 / A/MD/12/1991(H1N1) / 2362 / 99% / 95%
62 / EU798848.1 / A/swine/Korea/CY08/2007(H1N2) / 2355 / 100% / 95%
63 / EU798847.1 / A/swine/Korea/PZ14/2006(H1N2) / 2355 / 100% / 95%
64 / EU798846.1 / A/swine/Korea/PZ7/2006(H1N2) / 2355 / 100% / 95%
65 / EU798845.1 / A/swine/Korea/PZ4/2006(H1N2) / 2355 / 100% / 95%
66 / EU798842.1 / A/swine/Korea/JL02/2005(H1N2) / 2355 / 100% / 95%
67 / EU735789.1 / A/turkey/NC/19762/1988(H1N1) / 2355 / 100% / 95%
68 / EU258936.1 / A/swine/Missouri/2124514/2006(H2N3) / 2355 / 100% / 95%
69 / FJ357107.1 / A/turkey/NC/17026/1988(H1N1) / 2350 / 100% / 94%
70 / DQ666936.1 / A/swine/Korea/S11/2005(H1N2) / 2350 / 100% / 94%
71 / DQ280217.1 / A/swine/Ontario/53518/03(H1N1) / 2350 / 100% / 94%
72 / DQ145541.1 / A/swine/Minnesota/00395/2004(H3N1) / 2348 / 99% / 95%
73 / FJ461599.1 / A/swine/Korea/C13/2008(H5N2) / 2344 / 100% / 94%
74 / EU399754.1 / A/Ontario/1252/2007(H3N2) / 2344 / 100% / 94%
75 / M76610.1 / A/Wisconsin/3623/1988(H1N1) / 2344 / 100% / 94%
76 / EU258946.1 / A/swine/Missouri/4296424/2006(H2N3) / 2338 / 100% / 94%
77 / DQ666947.1 / A/swine/Korea/S15/2006(H1N2) / 2338 / 100% / 94%
78 / DQ666928.1 / A/swine/Korea/S5/2005(H1N2) / 2338 / 100% / 94%
79 / EF551046.1 / A/turkey/Illinois/2004(H3N2) / 2338 / 97% / 95%
80 / DQ923513.1 / A/swine/Korea/CN22/2006(H3N1) / 2337 / 99% / 94%
81 / DQ923512.1 / A/swine/Korea/PZ72-1/2006(H3N1) / 2337 / 99% / 94%
82 / CY014763.1 / A/turkey/Minnesota/12537/1989(H1N1) / 2333 / 100% / 94%
83 / EU798844.1 / A/swine/Korea/Asan04/2006(H1N2) / 2327 / 100% / 94%
84 / EU798841.1 / A/swine/Korea/JL01/2005(H1N2) / 2327 / 100% / 94%
85 / AF251407.2 / A/Swine/Nebraska/209/98 (H3N2) / 2327 / 100% / 94%
86 / EU798840.1 / A/swine/Korea/Hongsong2/2004(H1N2) / 2322 / 100% / 94%
87 / EU604694.1 / A/swine/OH/511445/2007(H1N1) / 2316 / 100% / 94%
88 / EU798843.1 / A/swine/Korea/JL04/2005(H1N2) / 2316 / 100% / 94%
89 / EU743178.1 / A/chicken/NY/21665-73/1998(H1N1) / 2316 / 100% / 94%
90 / CY028174.1 / A/swine/Iowa/2/1987(H1N1) / 2316 / 100% / 94%
91 / M76609.1 / A/turkey/North Carolina/1790/1988(H1N1) / 2311 / 100% / 94%
92 / AF222774.1 / A/Swine/Wisconsin/235/97(H1N1) / 2307 / 99% / 94%
93 / AF222775.1 / I A/Swine/Wisconsin/238/97(H1N1) / 2305 / 100% / 94%
Blast target sequences of segment 6 NA gene (Query: FJ966084)
Accession / Description / Max score / Query coverage / Max identFJ969517.1 / A/California/04/2009(H1N1) / 2604 / 100% / 100%
FJ966973.1 / A/California/09/2009(H1N1) / 2604 / 100% / 100%
FJ966084.1 / A/California/04/2009(H1N1) / 2604 / 100% / 100%
FJ966981.1 / A/Texas/04/2009(H1N1) / 2599 / 100% / 99%
FJ966956.1 / A/California/05/2009(H1N1) / 2593 / 100% / 99%
FJ966969.1 / A/Texas/05/2009(H1N1) / 2586 / 99% / 99%
FJ969534.1 / A/Ohio/07/2009(H1N1) / 2582 / 99% / 99%
FJ969541.1 / A/New York/20/2009(H1N1) / 2545 / 98% / 99%
FJ969520.1 / A/Ohio/07/2009(H1N1) / 2545 / 98% / 99%
1 / AF250366.2 / A/Swine/England/195852/92 (H1N1) / 2148 / 99% / 94%
2 / CY038009.1 / A/swine/England/WVL7/1992(H1N1) / 2145 / 99% / 94%
3 / CY038001.1 / A/swine/Spain/WVL6/1991(H1N1) / 2139 / 99% / 94%
4 / CY037908.1 / A/swine/England/WVL10/1993(H1N1) / 2117 / 99% / 93%
5 / CY037916.1 / A/swine/England/WVL11/1994(H1N1) / 2095 / 99% / 93%
6 / AM920729.1 / A/swine/Germany/Vi5698/95(H1N1) / 2095 / 100% / 93%
7 / CY038025.1 / A/swine/Denmark/WVL9/1993(H1N1) / 2084 / 99% / 93%
8 / CY037938.1 / A/swine/England/WVL14/1996(H1N1) / 2084 / 99% / 93%
9 / CY037946.1 / A/swine/England/WVL15/1997(H1N1) / 2056 / 99% / 93%
10 / FJ805963.1 / A/swine/Belgium/1/1998(H1N1) / 2039 / 100% / 92%
11 / CY037985.1 / A/swine/France/WVL4/1985(H1N1) / 2028 / 99% / 92%
12 / CY037954.1 / A/swine/England/WVL16/1998(H1N1) / 2028 / 99% / 92%
13 / CY037993.1 / A/swine/Belgium/WVL5/1989(H1N1) / 2019 / 99% / 92%
14 / AJ412690.1 / A/swine/Belgium/1/83(H1N1) / 2012 / 100% / 92%
15 / AJ410876.1 / swine/Italy/1424-4/95 (H1N1) / 2012 / 99% / 92%
16 / AJ412691.1 / A/swine/Belgium/74/85(H1N1) / 2006 / 97% / 92%
17 / AJ410881.1 / swine/Cotes d'Armor/1488/99 (H1N1) / 1999 / 98% / 92%
18 / EU045389.2 / A/swine/Italy/65296/2004(H1N1) / 1995 / 100% / 92%
19 / EU045388.2 / A/swine/Italy/53949/2004(H1N1) / 1995 / 100% / 92%
20 / AJ416626.1 / A/turkey/France/87075/87(H1N1) / 1995 / 100% / 92%
21 / CY037969.1 / A/swine/Belgium/WVL2/1983(H1N1) / 1989 / 99% / 92%
22 / AJ412689.1 / A/swine/Finistere/3616/84(H1N1) / 1989 / 100% / 92%
23 / EU045393.2 / A/swine/Italy/247578/2004(H1N1) / 1984 / 100% / 92%
24 / CY010582.1 / A/swine/Spain/53207/2004(H1N1) / 1984 / 100% / 92%
25 / CY010574.1 / A/swine/Spain/51915/2003(H1N1) / 1984 / 100% / 92%
26 / AJ412692.1 / A/swine/Lot/2979/82(H1N1) / 1984 / 100% / 92%
27 / CY037977.1 / A/swine/France/WVL3/1984(H1N1) / 1973 / 99% / 92%
28 / CY022988.1 / A/swine/Virginia/671/1987(H1N1) / 1973 / 100% / 91%
29 / CY025255.1 / A/swine/Virginia/670/1987(H1N1) / 1962 / 100% / 91%
30 / AJ410880.1 / swine/Italy/1509-6/97 (H1N1) / 1962 / 100% / 91%
31 / CY038017.1 / A/swine/France/WVL8/1992(H1N1) / 1956 / 99% / 91%
32 / CY037931.1 / A/swine/France/WVL13/1995(H1N1) / 1956 / 99% / 91%
33 / AB434290.1 / A/swine/Ratchaburi/NIAH1481/2000(H1N1) / 1956 / 100% / 91%
34 / CY037962.1 / A/swine/Scotland/WVL17/1999(H1N1) / 1936 / 99% / 91%
35 / AB434314.1 / A/swine/Chonburi/NIAH977/2004(H1N1) / 1932 / 100% / 91%
36 / AJ410882.1 / swine/Ille et Vilaine/1455/99 (H1N1) / 1932 / 94% / 92%
37 / EU037015.1 / A/swine/Italy/66945/2006(H3N1) / 1929 / 100% / 91%
38 / CY037900.1 / A/swine/Belgium/WVL1/1979(H1N1) / 1923 / 99% / 91%
39 / AB434298.1 / A/swine/Ratchaburi/NIAH550/2003(H1N1) / 1923 / 100% / 91%
40 / FJ798780.1 / A/swine/Hungary/19774/2006(H1N1) / 1917 / 100% / 91%
41 / AB434306.1 / A/swine/Chonburi/NIAH9469/2004(H1N1) / 1917 / 100% / 91%
42 / CY009894.1 / A/Swine/Spain/50047/2003(H1N1) / 1917 / 100% / 91%
43 / FJ415611.1 / A/swine/Zhejiang/1/2007(H1N1) / 1912 / 100% / 91%
44 / AJ410879.1 / swine/Italy/1492/97 (H1N1) / 1901 / 94% / 92%
45 / AB434330.1 / A/swine/Chachoengsao/NIAH587/2005(H1N1) / 1881 / 99% / 90%
46 / AB434322.1 / A/swine/Chonburi/NIAH589/2005(H1N1) / 1881 / 99% / 90%
47 / EU296606.1 / A/swine/Chonburi/06CB2/2006(H1N1) / 1879 / 100% / 90%
48 / EU296604.1 / A/swine/Chonburi/05CB1/2005(H1N1) / 1879 / 100% / 90%
49 / EU296602.1 / A/swine/Chachoengsao/NIAH587/2005(H1N1) / 1879 / 100% / 90%
50 / FJ688267.1 / A/swine/Thailand/HF6/2005(H1N1) / 1877 / 99% / 90%
51 / AJ410883.1 / swine/Cotes d'Armor/1482/99 (H1N1) / 1873 / 98% / 90%
52 / EF101756.1 / A/Thailand/271/2005(H1N1) / 1871 / 99% / 90%
53 / EU296600.1 / A/swine/Chonburi/NIAH589/2005(H1N1) / 1866 / 99% / 90%
54 / AJ410878.1 / swine/Italy/1513-8/98 (H1N1) / 1855 / 92% / 92%
55 / AJ416629.1 / A/African starling/England/983/79(H7N1) / 1849 / 99% / 90%
56 / AB294216.1 / A/duck/Hong Kong/716/1979(H6N1) / 1838 / 99% / 90%
57 / AJ410875.1 / swine/Cotes d'Armor/1121/00 (H1N1) / 1834 / 91% / 92%
58 / AJ410884.1 / swine/Cotes d'Armor/1515/99 (H1N1) / 1820 / 96% / 90%
59 / AJ410877.1 / swine/Italy/1424-3/95 (H1N1) / 1808 / 90% / 92%
60 / DQ349117.1 / A/chicken/Hebei/718/2001(H5N1) / 1796 / 100% / 89%
61 / AB271118.1 / A/duck/Hong Kong/938/80(H10N1) / 1783 / 99% / 89%
62 / AB292403.1 / A/duck/Hong Kong/836/1980(H3N1) / 1777 / 99% / 89%
63 / AY207534.1 / A/duck/Miyagil/9/77(H1N1) / 1733 / 99% / 88%
64 / AB271114.1 / A/duck/Miyagi/66/77(H1N1) / 1727 / 99% / 88%
65 / AB450452.1 / A/duck/Miyagi/47/1977(H11N1) / 1722 / 99% / 88%
66 / K02252.1 / A/parrot/Ulster/1973(H7N1) / 1722 / 99% / 88%
67 / EF443160.1 / A/duck/India/836/1980(H3N1) / 1718 / 97% / 89%
68 / CY005607.1 / A/chicken/Hong Kong/17/1977(H6N1) / 1711 / 99% / 88%
69 / AY207538.1 / A/softbill/South Africa/142/92(H7N1) / 1694 / 99% / 88%
70 / CY005495.1 / A/duck/Nanchang/1904/1992(H7N1) / 1688 / 99% / 88%
71 / AJ410567.1 / A/duck/Hong Kong/202/77 (H6N1) / 1688 / 99% / 88%
72 / AJ410566.1 / A/duck/Hong Kong/175/77 (H6N1) / 1688 / 99% / 88%
73 / AY207527.1 / A/duck/Nanchang/1944/92(H7N1) / 1683 / 99% / 88%
74 / AY207540.1 / A/mallard/Stralsund/41-6/81(H2N1) / 1661 / 99% / 88%
75 / AB271116.1 / A/duck/Hokkaido/55/96(H1N1) / 1644 / 99% / 87%
76 / FJ432780.1 / A/goose/Italy/296426/2003(H1N1) / 1639 / 99% / 87%
77 / AF509109.2 / A/Chicken/Hong Kong/873.3/01 (H5N1) / 1633 / 99% / 87%
78 / AF509100.2 / A/Chicken/Hong Kong/715.5/01 (H5N1) / 1633 / 99% / 87%
79 / DQ997514.1 / A/duck/Guangxi/xa/2001(H5N1) / 1633 / 99% / 87%
80 / DQ997183.1 / A/chicken/Jiangsu/cz1/2002(H5N1) / 1633 / 99% / 87%
81 / AY221544.1 / A/Pheasant/HongKong/FY155/01(H5N1) / 1633 / 99% / 87%
82 / AY221540.1 / A/Chicken/HongKong/NT873.3/01(H5N1) / 1633 / 99% / 87%
83 / AY221539.1 / A/Chicken/HongKong/NT873.3/01-MB(H5N1) / 1633 / 99% / 87%
84 / DQ432046.1 / A/swine/Fujian/2003(H5N1) / 1628 / 99% / 87%
85 / DQ432038.1 / A/swine/Fujian/2001(H5N1) / 1628 / 99% / 87%
86 / AY747610.2 / A/swine/Fujian/1/2003(H5N1) / 1628 / 99% / 87%
87 / AF509095.1 / A/Chicken/Hong Kong/FY150/01 (H5N1) / 1628 / 99% / 87%
88 / AY221542.1 / A/Chicken/HongKong/FY150/01(H5N1) / 1628 / 99% / 87%
89 / AY221541.1 / A/Chicken/HongKong/FY150/01-MB(H5N1) / 1628 / 99% / 87%
90 / AB470668.1 / A/duck/Mongolia/253/2003(H1N1) / 1622 / 99% / 87%
91 / AY585419.1 / A/duck/Zhejiang/52/2000(H5N1) / 1622 / 99% / 87%
Blast target sequences of segment 7 MP gene (Query: FJ966085)
Accession / Description / Max score / Query coverage / Max identFJ969537.1 / A/California/07/2009(H1N1) / 1796 / 100% / 100%
FJ969532.1 / A/California/08/2009(H1N1) / 1796 / 100% / 100%
FJ969527.1 / A/California/07/2009(H1N1) / 1796 / 100% / 100%
FJ969518.1 / A/California/08/2009(H1N1) / 1796 / 100% / 100%
FJ969513.1 / A/California/04/2009(H1N1) / 1796 / 100% / 100%
FJ969510.1 / A/California/10/2009(H1N1) / 1796 / 100% / 100%
FJ966975.1 / A/California/07/2009(H1N1) / 1796 / 100% / 100%
FJ966972.1 / A/California/09/2009(H1N1) / 1796 / 100% / 100%
FJ966962.1 / A/California/06/2009(H1N1) / 1796 / 100% / 100%
FJ966954.1 / A/California/05/2009(H1N1) / 1796 / 100% / 100%
FJ966085.1 / A/California/04/2009(H1N1) / 1796 / 100% / 100%
FJ966983.1 / A/Texas/04/2009(H1N1) / 1790 / 100% / 99%
FJ966968.1 / A/Texas/05/2009(H1N1) / 1790 / 100% / 99%
FJ966980.1 / A/Texas/04/2009(H1N1) / 1786 / 99% / 99%
1 / AY363575.1 / A/swine/Hong Kong/5212/99(H3N2) / 1657 / 99% / 97%
2 / AY363574.1 / A/swine/Hong Kong/5200/99(H3N2) / 1657 / 99% / 97%
3 / AY363573.1 / A/swine/Hong Kong/5190/99(H3N2) / 1657 / 99% / 97%
4 / AJ293925.1 / A/Hong Kong/1774/99(H3N2) / 1646 / 100% / 97%
5 / AY363580.1 / A/swine/Hong Kong/1197/02(H3N2) / 1640 / 99% / 97%
6 / AY363579.1 / A/swine/Hong Kong/1144/02(H3N2) / 1640 / 99% / 97%
7 / AY363578.1 / A/swine/Hong Kong/9745/01(H3N2) / 1635 / 99% / 97%
8 / AY363576.1 / A/swine/Hong Kong/7982/00(H3N2) / 1624 / 99% / 97%
9 / AY363577.1 / A/swine/Hong Kong/9296/01(H3N2) / 1613 / 99% / 96%
10 / CY038026.1 / A/swine/Denmark/WVL9/1993(H1N1) / 1607 / 100% / 96%
11 / CY037909.1 / A/swine/England/WVL10/1993(H1N1) / 1607 / 100% / 96%
12 / DQ186981.1 / A/swine/Leipzig/145/92(H3N2) / 1607 / 100% / 96%
13 / CY038002.1 / A/swine/Spain/WVL6/1991(H1N1) / 1596 / 99% / 96%
14 / CY038010.1 / A/swine/England/WVL7/1992(H1N1) / 1591 / 100% / 96%
15 / CY037917.1 / A/swine/England/WVL11/1994(H1N1) / 1591 / 100% / 96%
16 / CY037924.1 / A/swine/England/WVL12/1995(H1N1) / 1585 / 100% / 96%
17 / EU478802.1 / A/swine/England/17394/96(H1N2) / 1585 / 100% / 96%
18 / CY038018.1 / A/swine/France/WVL8/1992(H1N1) / 1580 / 99% / 96%
19 / EU478801.1 / A/swine/Bakum/909/93(H3N2) / 1580 / 100% / 96%
20 / EU478799.1 / A/swine/Gent/V230/92(H1N1) / 1580 / 100% / 96%
21 / AM746618.1 / A/wild boar/Germany/WS169/2006(H3N2) / 1580 / 100% / 96%
22 / AJ316052.1 / A/swine/Italy/1521/98(H1N2) / 1580 / 100% / 96%
23 / AJ316047.1 / A/swine/Cotes d'Armor/1482/99(H1N1) / 1580 / 98% / 96%
24 / DQ186984.1 / A/swine/Bakum/8602/99(H3N2) / 1574 / 100% / 95%
25 / Z26861.1 / A/swine/Germany/8533/91(H1N1) / 1574 / 100% / 95%
26 / FJ805964.1 / A/swine/Belgium/1/1998(H1N1) / 1568 / 100% / 95%
27 / EU478830.1 / A/swine/Wedel/IDT2955/04(H1N1) / 1568 / 100% / 95%
28 / EU478805.1 / A/swine/Berlin/1578/00(H3N2) / 1568 / 100% / 95%
29 / AM920740.1 / A/swine/Germany/SEk1178/2000(H1N2) / 1568 / 100% / 95%
30 / DQ186976.1 / A/swine/Belzig/2/2001(H1N1) / 1568 / 100% / 95%
31 / Z26859.1 / A/turkey/Germany/3/91(H1N1) / 1568 / 100% / 95%
32 / Z46439.1 / Schleswig-H/1/93 / 1568 / 100% / 95%
33 / EU478811.1 / A/swine/Haseluenne/2617/03(H1N1) / 1567 / 100% / 95%
34 / CY037955.1 / A/swine/England/WVL16/1998(H1N1) / 1563 / 100% / 95%
35 / CY037947.1 / A/swine/England/WVL15/1997(H1N1) / 1563 / 100% / 95%
36 / EU478814.1 / A/swine/Nordkirchen/IDT1993/03(H3N2) / 1563 / 100% / 95%
37 / EU478796.1 / A/swine/Potsdam/1/81(H1N1) / 1563 / 100% / 95%
38 / AM920734.1 / A/swine/Germany/SEC27/97(H3N2) / 1563 / 100% / 95%
39 / AB434331.1 / A/swine/Chachoengsao/NIAH587/2005(H1N1) / 1563 / 100% / 95%
40 / AB434323.1 / A/swine/Chonburi/NIAH589/2005(H1N1) / 1563 / 100% / 95%
41 / CY025254.1 / A/swine/Virginia/670/1987(H1N1) / 1563 / 100% / 95%
42 / AJ316049.1 / A/swine/Cotes d'Armor/790/97(H1N2) / 1563 / 100% / 95%
43 / CY037963.1 / A/swine/Scotland/WVL17/1999(H1N1) / 1557 / 99% / 95%
44 / AM920745.1 / A/swine/Germany/S043/2002(H3N2) / 1557 / 100% / 95%
45 / AM920731.1 / A/swine/Germany/Vi5698/95(H1N1) / 1557 / 100% / 95%
46 / AB434291.1 / A/swine/Ratchaburi/NIAH1481/2000(H1N1) / 1557 / 100% / 95%
47 / CY022987.1 / A/swine/Virginia/671/1987(H1N1) / 1557 / 100% / 95%
48 / AJ316051.1 / A/swine/Cotes d'Armor/604/99(H1N2) / 1557 / 99% / 95%
49 / CY009381.1 / A/swine/Spain/39139/2002(H3N2) / 1555 / 99% / 95%
50 / CY037939.1 / A/swine/England/WVL14/1996(H1N1) / 1552 / 100% / 95%
51 / EU478825.1 / A/swine/Gudensberg/IDT2931/04(H1N2) / 1552 / 100% / 95%
52 / EU478824.1 / A/swine/Gudensberg/IDT2930/04(H1N2) / 1552 / 100% / 95%
53 / EU478806.1 / A/swine/Belzig/54/01(H3N2) / 1552 / 100% / 95%
54 / AB434379.1 / A/swine/Ratchaburi/NIAH874/2005(H3N2) / 1552 / 100% / 95%
55 / DQ186982.1 / A/swine/Jena/5/96(H3N2) / 1552 / 100% / 95%
56 / DQ186977.1 / A/swine/Bakum/1832/00(H1N2) / 1552 / 100% / 95%
57 / CY037994.1 / A/swine/Belgium/WVL5/1989(H1N1) / 1546 / 99% / 95%
58 / EU478821.1 / A/swine/Geldern/IDT2888/04(H1N1) / 1546 / 100% / 95%
59 / EU478804.1 / A/swine/Gent/7625/99(H1N2) / 1546 / 100% / 95%
60 / EU478800.1 / A/swine/IDT/Re220/92(H3N2) / 1546 / 100% / 95%
61 / AM920726.1 / A/swine/Germany/Vi3161/95(H3N2) / 1546 / 100% / 95%
62 / FJ415612.1 / A/swine/Zhejiang/1/2007(H1N1) / 1546 / 100% / 95%
63 / DQ186978.1 / A/swine/Bakum/1833/00(H1N2) / 1546 / 100% / 95%
64 / EU478803.1 / A/swine/Bakum/1362/98(H3N2) / 1541 / 100% / 95%
65 / AB434355.1 / A/swine/Udon Thani/NIAH464/2004(H3N2) / 1541 / 100% / 95%
66 / AB434299.1 / A/swine/Ratchaburi/NIAH550/2003(H1N1) / 1541 / 100% / 95%
67 / DQ186983.1 / A/swine/Lohne/1/97(H3N2) / 1541 / 100% / 95%
68 / EU478795.1 / A/swine/Hannover/1/81(H1N1) / 1535 / 100% / 95%
69 / AB434339.1 / A/swine/Saraburi/NIAH13021/2005(H1N2) / 1535 / 100% / 95%
70 / AB434315.1 / A/swine/Chonburi/NIAH977/2004(H1N1) / 1535 / 100% / 95%
71 / DQ186973.1 / A/swine/Potsdam/15/81(H1N1) / 1535 / 100% / 95%
72 / AJ293938.1 / A/swine/Italy/1553-2/98(H3N2) / 1535 / 100% / 95%
73 / CY037986.1 / A/swine/France/WVL4/1985(H1N1) / 1530 / 100% / 95%
74 / EU478798.1 / A/swine/Gent/1/84(H3N2) / 1530 / 100% / 95%
75 / EU478797.1 / A/swine/Potsdam/268/81(H1N1) / 1530 / 100% / 95%
76 / AB434307.1 / A/swine/Chonburi/NIAH9469/2004(H1N1) / 1530 / 100% / 95%
77 / CY020502.1 / A/swine/Spain/42386/2002(H3N2) / 1530 / 100% / 95%
78 / CY037978.1 / A/swine/France/WVL3/1984(H1N1) / 1524 / 99% / 95%
79 / EU478828.1 / A/swine/Seesen/IDT3055/04(H3N2) / 1524 / 100% / 94%
80 / EU478819.1 / A/swine/Waltersdorf/IDT2527/03(H1N2) / 1524 / 100% / 94%
81 / EU478808.1 / A/swine/Bissendorf/IDT1864/03(H3N2) / 1524 / 100% / 94%
82 / AB434347.1 / A/swine/Chachoengsao/2003(H3N2) / 1524 / 100% / 94%
83 / DQ186974.1 / A/swine/Schwerin/103/89(H1N1) / 1524 / 100% / 94%
84 / M55478.1 / A/swine/Germany/2/1981(H1N1) / 1524 / 100% / 94%
85 / CY037970.1 / A/swine/Belgium/WVL2/1983(H1N1) / 1519 / 99% / 94%
86 / EU478842.1 / A/swine/Sprenge/IDT3805/05(H1N2) / 1519 / 100% / 94%
Blast target sequences of segment 8 NS gene (Query: FJ966086)
Accession / Description / Max score / Query coverage / Max identFJ969538.1 / A/California/07/2009(H1N1) / 1548 / 100% / 100%
FJ969533.1 / A/California/08/2009(H1N1) / 1548 / 100% / 100%
FJ969528.1 / A/California/07/2009(H1N1) / 1548 / 100% / 100%
FJ969519.1 / A/California/08/2009(H1N1) / 1548 / 100% / 100%
FJ969514.1 / A/California/04/2009(H1N1) / 1548 / 100% / 100%
FJ966086.1 / A/California/04/2009(H1N1) / 1548 / 100% / 100%
FJ966966.1 / A/Texas/05/2009(H1N1) / 1543 / 100% / 99%
1 / AF153262.1 / A/Swine/Minnesota/9088-2/98 (H3N2) / 1387 / 100% / 96%
2 / AF153261.1 / A/Swine/Texas/4199-2/98 (H3N2) / 1387 / 100% / 96%
3 / AF153263.1 / A/Swine/Iowa/8548-1/98 / 1382 / 100% / 96%
4 / AF250128.1 / A/Swine/Indiana/9K035/99 (H1N2) / 1371 / 100% / 96%
5 / EU798872.1 / A/swine/Korea/CAS09/2006(H3N2) / 1365 / 100% / 96%
6 / AY060136.1 / A/SW/IN/14810-S/01(H1N2) / 1365 / 100% / 96%
7 / AY060135.1 / A/SW/IN/14810-T/01(H1N2) / 1365 / 100% / 96%
8 / AY060129.1 / A/SW/MN/3327/00(H1N2) / 1365 / 100% / 96%
9 / AF455710.1 / A/Swine/Minnesota/55551/00 (H1N2) / 1365 / 100% / 96%
10 / AF455708.1 / A/Swine/North Carolina/98225/01(H1N2) / 1365 / 100% / 96%
11 / EU798871.1 / A/swine/Korea/CAS07/2005(H3N2) / 1360 / 100% / 95%
12 / EU798870.1 / A/swine/Korea/CAN04/2005(H3N2) / 1360 / 100% / 95%
13 / EU798859.1 / A/swine/Korea/CAS08/2005(H1N1) / 1360 / 100% / 95%
14 / AF455711.1 / A/Swine/Iowa/930/01(H1N2) / 1360 / 100% / 95%
15 / EU798858.1 / A/swine/Korea/CAN01/2004(H1N1) / 1354 / 100% / 95%
16 / EU735822.1 / A/turkey/OH/313053/2004(H3N2) / 1354 / 100% / 95%
17 / AY129160.1 / A/Swine/Korea/CY02/02(H1N2) / 1354 / 100% / 95%
18 / AY060131.1 / A/SW/MN/22860-S/01(H1N2) / 1354 / 100% / 95%
19 / AY060130.1 / A/SW/MN/22860-T/01(H1N2) / 1354 / 100% / 95%
20 / AY038021.1 / A/Turkey/MO/24093/99(H1N2) / 1354 / 100% / 95%
21 / AF455714.1 / A/Swine/Illinois/100084/01 (H1N2) / 1354 / 100% / 95%
22 / AF455709.1 / A/Swine/North Carolina/93523/01 (H1N2) / 1354 / 100% / 95%
23 / AF455707.1 / A/Swine/Ohio/891/01(H1N2) / 1354 / 100% / 95%
24 / AF251408.1 / A/Swine/Nebraska/209/98 (H3N2) / 1354 / 100% / 95%
25 / EF551057.1 / A/swine/North Carolina/2003(H3N2) / 1349 / 100% / 95%
26 / EF551049.1 / A/turkey/Illinois/2004(H3N2) / 1349 / 100% / 95%
27 / DQ150437.1 / A/swine/IN/PU542/04 (H3N1) / 1349 / 100% / 95%
28 / AY779259.1 / A/turkey/NorthCarolina/12344/03(H3N2) / 1349 / 100% / 95%
29 / AY060149.1 / A/SW/NC/45319/99(H1N2) / 1349 / 100% / 95%
30 / AF251432.1 / A/Swine/Minnesota/593/99 (H3N2) / 1349 / 100% / 95%
31 / AF251416.1 / A/Swine/Iowa/533/99 (H3N2) / 1349 / 100% / 95%
32 / EU826547.1 / A/swine/Quebec/4001/2005(H3N2) / 1343 / 100% / 95%
33 / DQ469990.1 / A/swine/Ontario/33853/2005(H3N2) / 1343 / 100% / 95%
34 / DQ469982.1 / A/swine/Manitoba/12707/2005(H3N2) / 1343 / 100% / 95%
35 / DQ469958.1 / A/Ontario/RV1273/2005(H3N2) / 1343 / 100% / 95%
36 / AY060148.1 / A/SW/OH/7802/00(H1N2) / 1343 / 100% / 95%
37 / AY060134.1 / A/SW/KS/13481-S/00(H1N2) / 1343 / 100% / 95%
38 / AY060133.1 / A/SW/KS/13481-T/00(H1N2) / 1343 / 100% / 95%
39 / AF342817.1 / A/Wisconsin/10/98 (H1N1) / 1343 / 100% / 95%
40 / DQ335775.1 / A/turkey/Ohio/313053/04(H3N2) / 1343 / 100% / 95%
41 / EU697208.1 / A/turkey/Minnesota/366767/2005(H3N2) / 1338 / 100% / 95%
42 / EU743214.1 / A/turkey/MN/366767/2005(H3N2) / 1338 / 100% / 95%
43 / EU735830.1 / A/turkey/NC/353568/2005(H3N2) / 1338 / 100% / 95%
44 / DQ469998.1 / A/turkey/Ontario/31232/2005(H3N2) / 1338 / 100% / 95%
45 / DQ469974.1 / A/swine/British Columbia/28103/2005(H3N2) / 1338 / 100% / 95%
46 / DQ469966.1 / A/swine/Alberta/14722/2005(H3N2) / 1338 / 100% / 95%
47 / DQ150429.1 / A/swine/MI/PU243/04 (H3N1) / 1338 / 100% / 95%
48 / AY779260.1 / A/turkey/Minnesota/764-2/03(H3N2) / 1338 / 100% / 95%
49 / AY060147.1 / A/SW/MN/13130/00(H1N2) / 1338 / 100% / 95%
50 / AY060146.1 / A/SW/NE/18339/01(H1N2) / 1338 / 100% / 95%
51 / AY060145.1 / A/SW/MN/34893/01(H1N2) / 1338 / 100% / 95%
52 / AY060144.1 / A/SW/NE/21147/01(H1N2) / 1338 / 100% / 95%
53 / AY060141.1 / A/SW/CO/17871/01(H1N2) / 1338 / 100% / 95%
54 / AY060128.1 / A/SW/MN/12883/00(H1N2) / 1338 / 100% / 95%
55 / AY233390.1 / A/duck/NC/91347/01(H1N2) / 1338 / 100% / 95%
56 / AF455713.1 / A/Swine/Illinois/100085A/01 (H1N2) / 1338 / 100% / 95%
57 / EU697213.1 / A/turkey/North Carolina/353568/2005(H3N2) / 1332 / 100% / 95%
58 / AY060137.1 / A/SW/MN/16356/01(H1N2) / 1332 / 100% / 95%
59 / AY060132.1 / A/SW/MN/3128/00(H1N2) / 1327 / 100% / 95%
60 / AF251424.1 / A/Swine/Iowa/569/99 (H3N2) / 1327 / 100% / 95%
61 / DQ666929.1 / A/swine/Korea/S5/2005(H1N2) / 1325 / 99% / 95%
62 / EU826555.1 / A/mink/Nova Scotia/1055488/2007(H3N2) / 1321 / 100% / 95%
63 / EU798868.1 / A/swine/Korea/CY08/2007(H1N2) / 1321 / 100% / 95%
64 / EU798866.1 / A/swine/Korea/PZ7/2006(H1N2) / 1321 / 100% / 95%
65 / EU798865.1 / A/swine/Korea/PZ4/2006(H1N2) / 1321 / 100% / 95%
66 / AY060139.1 / A/SW/MN/17138/01(H1N2) / 1321 / 100% / 95%
67 / AY060127.1 / A/SW/AR/12491/00(H1N2) / 1321 / 100% / 95%
68 / AF455712.1 / A/Swine/Indiana/P12439/00 (H1N2) / 1321 / 100% / 95%
69 / EU604696.1 / A/swine/OH/511445/2007(H1N1) / 1315 / 100% / 95%
70 / EU798867.1 / A/swine/Korea/PZ14/2006(H1N2) / 1315 / 100% / 95%
71 / EU798862.1 / A/swine/Korea/JL02/2005(H1N2) / 1315 / 100% / 95%
72 / AY060126.1 / A/SW/MO/18777/01(H1N2) / 1315 / 100% / 95%
73 / DQ889685.1 / A/Iowa/CEID23/2005(H1N1) / 1310 / 100% / 94%
74 / AY060143.1 / A/SW/MN/23124-S/01(H1N2) / 1310 / 100% / 94%
75 / AY060142.1 / A/SW/MN/23124-T/01(H1N2) / 1310 / 100% / 94%
76 / AY060140.1 / A/SW/NC/17366/01(H1N2) / 1310 / 100% / 94%
77 / AY060138.1 / A/SW/MN/16419/01(H1N2) / 1310 / 100% / 94%
78 / AY241663.1 / A/Chicken/NY/21665-73/98(H7N2) / 1310 / 100% / 94%
79 / AF153260.1 / A/Swine/North Carolina/35922/98(H3N2) / 1310 / 100% / 94%
80 / DQ923515.1 / A/swine/Korea/CN22/2006(H3N1) / 1308 / 99% / 94%
81 / DQ923514.1 / A/swine/Korea/PZ72-1/2006(H3N1) / 1308 / 99% / 94%
82 / DQ145543.1 / A/swine/Minnesota/00395/2004(H3N1) / 1306 / 98% / 95%
83 / EU798877.1 / A/swine/Korea/CY10/2007(H3N2) / 1304 / 100% / 94%
84 / EU798869.1 / A/swine/Korea/CAS05/2004(H3N2) / 1304 / 100% / 94%
85 / EU798863.1 / A/swine/Korea/JL04/2005(H1N2) / 1304 / 100% / 94%
86 / EU798860.1 / A/swine/Korea/Hongsong2/2004(H1N2) / 1304 / 100% / 94%
87 / EU743163.1 / A/turkey/IA/21089-3/1992(H1N1) / 1304 / 100% / 94%
88 / DQ666937.1 / A/swine/Korea/S11/2005(H1N2) / 1303 / 98% / 95%
89 / EU798861.1 / A/swine/Korea/JL01/2005(H1N2) / 1301 / 100% / 94%
90 / EU798864.1 / A/swine/Korea/Asan04/2006(H1N2) / 1299 / 100% / 94%
91 / EU399755.1 / A/Ontario/1252/2007(H3N2) / 1299 / 100% / 94%
92 / EU015988.1 / A/swine/Guangxi/13/2006(H1N2) / 1299 / 100% / 94%
93 / DQ280255.1 / A/swine/Wisconsin/464/98(H1N1) / 1299 / 100% / 94%