Athanasiou et al. - American Journal of Botany 90: 675-682. 2003. - Supplementary Data - Page 1
A. Athanasiou, D. Khosravi, F. Tamari, and J. S. Shore. 2003. Characterization and localization of short-specific polygalacturonase in distylous Turnera subulata (Turneraceae). American Journal of Botany90(5): 675-682.
APPENDIX. Sequence abbreviation, species, (gene name, when available), (tissue expressing the gene, when available) and accession numbers for polygalacturonase amino acid sequences used in the gene tree analysis. Modified from Markovič and Janeček (2001), with some additional sequences.
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AbbreviationaSpecies (gene name, expression)SwissProtGenBank
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AspflB.pg Aspergillus flavus (fungal)P41750U05020
Endopolygalacturonases
Actde.pgActinidia deliciosa (leaf & bud)P35336L12019
Actde2.pgActinidia deliciosa (fruit)-AAF71160
Arath11.pgArabidopsis thaliana (root & seedling)Q38958X98130
Arath12.pgArabidopsis thalianaO22699AC002292
Brana1.pgBrassica napus (PG35-8) (pod dehiscence)Q42399X95800
Brana2.pgBrassica napus (SAC66) (pod development)Q42636Z49971
Brana3.pgBrassica napus (leaf abscission) -AJ250919
Cucme1.pgCucumis melo (fruit ripening)O81244AF062465
Cucme2.pgCucumis melo " "O81245AF062466
Cucme3.pgCucumis melo " "O81246AF062467
Cucsa.pgCucumis sativus (stress induced) -AB035890
Glyma1.pgGlycine max (roots, wound response)Q9SWS3AF128266
LycesA.pgLycopersicon esculentum (PG2A, fruit)P05117X04583
Lyces1.pgL. esculentum (TAPG1) (stigma, style)O22311AF001000
Lyces2.pgL. esculentum (TAPG2) (stigma, style)Q96487AF001001
Lyces3.pgL. esculentum (TAPG3) (abscission)O22310AF000999
Lyces4.pgL. esculentum (TAPG4) (stigma, style)Q96488U70481
Lyces5.pgL. esculentum (TAPG5) (abscission)O22313AF001003
Lyces6.pgL. esculentum (TAPG6)O22610AF029230
Lyces7.pgL. esculentum (stigma, style) -AF072732
Lyces8.pgL. esculentum (wound response) -AF118567
Lyces9.pgL. esculentum (seed) -AF138858
Maldo.pgMalus domestica (fruit)P48978L27743
Medsa.pgMedicago sativa (MSPG3)O82019Y11118
(Medsa.pg is expressed in roots in response to Rhizobium infection)
Orysa.pgOryza sativa -AP003140
Peram.pgPersea americana (fruit)Q02096X66426
Pissa.pgPisum sativum -AF361321
Prupe1.pgPrunus persica (PRF5)(fruit)P48979X76735
Prupe3.pgPrunus persicaQ43063X77231
Rubid.pgRubus idaeus (fruit)O65886AJ224147
TsPG Turnera subulata (short style) -AY185765
Vitvi.pg Vitus vinifera (fruit) -AY043233
Exopolygalacturonases
Arath1.epgArabidopsis thaliana (flower)P49063X72292
Arath2.epgArabidopsis thaliana (flower)O65401X73222
Pollen Polygalacturonases
Cryja.ppCryptomeria japonica (pollen)P43212D29772
Goshi.ppGossypium hirsutum (pollen)Q39786U09717
Medsa.ppMedicago sativa (P73)(pollen)Q40312U20431
Nicta.ppNicotiana tabacum (pollen)Q05967X71020
Nicta2.ppNicotiana tabacum (sperm cell) -AF248538
Salgi2.ppSalix gilgiana (male flower)Q9MBB9AB029458
TsPP Turnera subulata (pollen)-AY185764
Brana.pepBrassica napus (Sta 44-4)(pollen)P35337L19879
Oenor.pepOenothera organensis (pollen)P24548 -
Phlpr.pepPhleum pratense (pollen)Q9XG86AJ238848
Zeama1.pepZea mays (pollen)P26216X57627
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aThe terminations of abbreviations for the individual enzyme specificities following Markovič and Janeček (2001) are: pg, endopolygalacturonase; epg, exopolygalacturonase; pp, pollen polygalacturonase; pep, pollen exopolygalacturonase.