Supplementary Table 1.Tomato chlorosis virus isolates used for the analysis of p22 genetic diversity with indication of the name, collection data and genetic type of their RNA1.

Isolate / Geographicalorigin / Year / Host / Type of RNA1a / Sequenceaccession no. / Reference
AT4/07 / Malaga, Spain / 2007 / Sweetpepper / I / KP668814 / Thisstudy
AT248/06 / Malaga, Spain / 2006 / Tomato / II / KP668815 / Thisstudy
AT133/08 / Malaga, Spain / 2008 / Sweetpepper / I / KP668816 / Thisstudy
AT264/06 / Malaga, Spain / 2006 / Tomato / II / KP668817 / Thisstudy
AT2/09 / Malaga, Spain / 2009 / Tomato / I / KP668818 / Thisstudy
AT92/06 / Almeria, Spain / 2006 / Tomato / II / KP668819 / Thisstudy
AT103/09 / Murcia, Spain / 2009 / Tomato / II / KP668820 / Thisstudy
AT52/09 / Almeria, Spain / 2009 / Tomato / II / KP668821 / Thisstudy
10B7 / Malaga, Spain / 2006 / Sweetpepper / I / KP668822 / Thisstudy
7/23 / Malaga, Spain / 2006 / Sweetpepper / I / KP668823 / Thisstudy
AT6/07 / Malaga, Spain / 2007 / Sweetpepper / I / KP668824 / Thisstudy
10B1 / Malaga, Spain / 2006 / Sweetpepper / I / KP668825 / Thisstudy
7/37 / Malaga, Spain / 2006 / Sweetpepper / I / KP668826 / Thisstudy
AT88/06 / Almeria, Spain / 2006 / Sweetpepper / I / KP668827 / Thisstudy
AT11/07 / Malaga, Spain / 2007 / Sweetpepper / I / KP668828 / Thisstudy
AT17/07 / Malaga, Spain / 2007 / Sweetpepper / I / KP668829 / Thisstudy
AT19/07 / Malaga, Spain / 2007 / Sweetpepper / I / KP668830 / Thisstudy
AT155/08 / Malaga, Spain / 2008 / Sweetpepper / I / KP668831 / Thisstudy
AT152/08 / Malaga, Spain / 2008 / Sweetpepper / I / KP668832 / Thisstudy
AT145/08 / Malaga, Spain / 2008 / Sweetpepper / I / KP668833 / Thisstudy
AT189/06 / Malaga, Spain / 2006 / Tomato / I / KP668834 / Thisstudy
AT126/06 / Almeria, Spain / 2006 / Tomato / I / KP668835 / Thisstudy
AT106/06 / Almeria, Spain / 2006 / Tomato / I / KP668836 / Thisstudy
AT158/06 / Murcia, Spain / 2006 / Tomato / I / KP668837 / Thisstudy
AT13/08 / Malaga, Spain / 2008 / Tomato / I / KP668838 / Thisstudy
AT66/08 / Murcia, Spain / 2008 / Tomato / I / KP668839 / Thisstudy
AT60/09 / Almeria, Spain / 2009 / Tomato / I / KP668840 / Thisstudy
AT136/06 / Murcia, Spain / 2006 / Tomato / I / KP668841 / Thisstudy
AT146/06 / Murcia, Spain / 2006 / Tomato / I / KP668842 / Thisstudy
AT89/06 / Almeria, Spain / 2006 / Tomato / II / KP668843 / Thisstudy
AT209/06 / Malaga, Spain / 2006 / Tomato / II / KP668844 / Thisstudy
AT265/06 / Malaga, Spain / 2006 / Tomato / II / KP668845 / Thisstudy
AT5/08 / Malaga, Spain / 2008 / Tomato / II / KP668846 / Thisstudy
AT43/08 / Almeria, Spain / 2008 / Tomato / II / KP668847 / Thisstudy
AT74/08 / Murcia, Spain / 2008 / Tomato / II / KP668848 / Thisstudy
AT18/09 / Malaga, Spain / 2009 / Tomato / II / KP668849 / Thisstudy
AT44/09 / Almeria, Spain / 2009 / Tomato / II / KP668850 / Thisstudy
AT89/09 / Murcia, Spain / 2009 / Tomato / II / KP668851 / Thisstudy
2.5 / Malaga, Spain / 2010 / Tomato / II / KP979663 / Thisstudy
AT80/99 / Malaga, Spain / 1999 / Tomato / I / DQ983480 / 1
Br-2 / Brazil / 2010 / Tomato / II / JQ952600 / 2
Florida / Florida / 1996 / Tomato / II / AY903447 / 3
Gr-535 / Greece / 2007 / Tomato / II / EU284745 / 4
SDSG / China / 2012 / Tomato / II / KC709509 / 5
NJ / China / 2011 / Tomato / II / KF018280 / 6

a : types of RNA1 as previously reported by Lozano et al. [31] and Fortes et al., unpublished data.

References(shown on supplementary Table 1):

  1. G. Lozano, E. Moriones, J. Navas-Castillo, Complete sequence of the RNA1 of a European isolate of tomato chlorosis virus. Arch. Virol. 152, 839-841 (2007)
  2. L.C. Albuquerque, F. Villanueva, R.O. Resende, J. Navas-Castillo, J.C. Barbosa, A.K. Inoue-Nagata, Molecular characterization reveals Brazilian tomato chlorosis virus to be closely related to a Greek isolate. Trop. Plant. Pathol. 38, 332-336 (2013)
  3. W. Wintermantel, G. Wisler, A. Anchieta, H.Y. Liu, A. Karasev, I. Tzanetakis, The complete nucleotide sequence and genome organization of tomato chlorosis virus. Arch. Virol. 150, 2287-2298 (2005)
  4. A.R.M. Kataya, M.N.S. Suliman, K. Kalantidis, I.C. Livieratos, Cucurbit yellow stunting disorder virus p25 is a suppressor of post-transcriptional gene silencing. Virus Res. 145, 48-53 (2009)
  5. L.M. Zhao, G. Li, Y. Gao, Y.J. Liu, G.Z. Sun, X.P. Zhu, Molecular detection and complete genome sequences of Tomato chlorosis virus isolates from infectious outbreaks in China. J. Phytopathol. 162, 627-634 (2014)
  6. M. Karwitha, Z. Feng, M. Yao, X. Chen, W. Zhang, X. Liu, X. Tao, The complete nucleotide sequence of the RNA 1 of a Chinese isolate of Tomato chlorosis virus. J. Phytopathol. 162, 411-415 (2013)